EY659937

Overview
NameEY659937
Unique NameEY659937
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7204 contig Csv1_Contig7204:1..921. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659937 vs. ExPASy Swiss-Prot
Match: LCAT_MYOGA (Phosphatidylcholine-sterol acyltransferase (Fragment) OS=Myodes glareolus GN=LCAT PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 46/131 (35.11%), Postives = 71/131 (54.20%), Query Frame = 2 
Query:  221 WFRLWFDPSVLLPPFTKCFADRMMLYYDPDLDDFHNSPGVETRVPHFGSTQSLLYLDPNFIWKEITGYMASLVESLERVGYVTGETLFGAPYDFRYGLAAGGHPSRVGSKFLQDLKDLIEKASNSNGGKPV 613
            +F ++ D ++ L     C+ D   + Y+       N+P V+ RVP FG T S+ YLD N    ++ GYM +LV++L   GYV  ET+  APYD+R        PS+   ++ Q L  L+E+  ++  GKPV
Sbjct:    1 FFTIFLDLNMFLALGVNCWIDNTRVVYNRSSGRMSNAPCVQIRVPGFGKTYSVEYLDDN----KLAGYMHTLVQNLVNNGYVRDETVLAAPYDWRL------EPSQ-QEEYYQKLAGLVEE-MHAAYGKPV 119
[Close]
BLAST of EY659937 vs. ExPASy Swiss-Prot
Match: LCAT_ELIQU (Phosphatidylcholine-sterol acyltransferase (Fragment) OS=Eliomys quercinus GN=LCAT PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.188e-11
Identity = 37/97 (38.14%), Postives = 53/97 (54.64%), Query Frame = 2 
Query:  215 EGWFRLWFDPSVLLPPFTKCFADRMMLYYDPDLDDFHNSPGVETRVPHFGSTQSLLYLDPNFIWKEITGYMASLVESLERVGYVTGETLFGAPYDFR 505
            E  F +W D ++ L     C+ D   + Y+       N+PGV+ RVP FG T S+ YLD N    ++ GYM +LV++L    YV  ET+   PYD+R
Sbjct:    1 EDCFTIWLDLNIFLSLGVDCWIDNTRVIYNRSSGYMSNAPGVQIRVPGFGKTYSIEYLDDN----KLAGYMHTLVQNLVNNAYVRDETVRAPPYDWR 93
The following BLAST results are available for this feature:
BLAST of EY659937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
LCAT_MYOGA9.097e-1235.11Phosphatidylcholine-sterol acyltransferase (Fragme... [more]
LCAT_ELIQU1.188e-1138.14Phosphatidylcholine-sterol acyltransferase (Fragme... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-G04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659937 ID=EY659937; Name=EY659937; organism=Citrus sinensis; type=EST; length=917bp
ACACGGGCGTNCGGNGAAAAAATTTCCAGAAGAAAGGATTGCGTTTCATA
GTAGCAATGTCGTTGTTTTGCACGTGTCTTGCACCAGTCGCGGTCTCCAC
CCTCTGATCTTGGTACCCGGCAACGGCGGAAACCAGCTAGAAGCGCGGCT
GACCAGTGATTACAAGCCCTCGAGCCTGCTGTGCAACCGTTGGTACCCAA
TTGTGAAGGACAGTGAAGGGTGGTTCAGGCTGTGGTTCGACCCCAGTGTT
TTGTTACCTCCGTTTACTAAGTGCTTTGCCGACCGCATGATGCTTTACTA
TGATCCTGATTTGGATGATTTTCACAATTCCCCTGGCGTCGAAACTAGAG
TCCCTCACTTTGGTTCCACTCAGTCCCTTCTCTACCTCGACCCCAATTTT
ATTTGGAAGGAAATTACAGGGTACATGGCATCTTTAGTGGAGTCTCTAGA
ACGAGTTGGCTATGTCACTGGTGAAACTCTCTTCGGAGCTCCATACGATT
TCCGATACGGATTGGCAGCAGGAGGTCATCCGTCCCGCGTTGGCTCCAAG
TTTTTGCAGGACCTGAAGGATTTGATAGAAAAAGCAAGCAATTCCAATGG
TGGGAAGCCAGTTATACTTGTTTCACACAGCTTGGGAGGGCTTTGCGTCC
TACNACTTCTTAACCCGAACCCTTTANCCTGGCGCAAGAATTTATCAAAC
ACTTTGTCGCTCTGTCTGCTCCGTGGGGTGGCACCGTCGAAAGAATGCTC
ACTTTTGCTCAGGCAGTACGCTAGGAAGTCCATTCGNTGATCCATTGGAT
GTGAGACAGAGCAGAAGAGCTCTGAAAGCAATCTATGCTCATGCCTATCC
CAAAGTGGTTGGGAGGCAAAAACGGTGGTTTTACCCCGATGCTACTTATC
AGCGATGATATCCTGAA
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