EY659932

Overview
NameEY659932
Unique NameEY659932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12677 contig Csv1_Contig12677:303..1221. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659932 vs. ExPASy Swiss-Prot
Match: ERDL2_ARATH (Sugar transporter ERD6-like 2 OS=Arabidopsis thaliana GN=SUGTL3 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 49/205 (23.90%), Postives = 85/205 (41.46%), Query Frame = 2
Query:   68 LAGAGLQAFQQFTGPNTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVG------TIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATXXXXXXXXXXXXXXXXXXXPETQGLTFLEVE 664
            + G GL   QQF G   +  Y+  I   AGF S+           GT  +       +IV +  +D +GR+ L + S  G+ I    +  ++          +   + ++GL  Y++ F  G+G +PW + SE++P   +   G +    NW  N I+  +F  + +   +G T                   PET+G T  E++
Sbjct:  262 IIGLGLMLLQQFCGSAAISAYAARIFDKAGFPSD----------IGTTILAVILIPQSIVVMLTVDRWGRRPLLMISSIGMCICSFFIGLSYYLQKNGEFQKLCSVMLIVGLVGYVSSFGIGLGGLPWVIMSEIFPVNVKITAGSLVTMSNWFFNWIIIYSFNFMIQWSASG-TYFIFSGVSLVTIVFIWTLVPETKGRTLEEIQ 455          
BLAST of EY659932 vs. ExPASy Swiss-Prot
Match: GTR12_MOUSE (Solute carrier family 2, facilitated glucose transporter member 12 OS=Mus musculus GN=Slc2a12 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.552e-11
Identity = 31/101 (30.69%), Postives = 56/101 (55.45%), Query Frame = 2
Query:  359 YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATXXXXXXXXXXXXXXXXXXXPETQGLTFLEV 661
            Y W+++  L +Y+A F+ G+GP+PW + SE++P   RG    +++++NW  NL+++ TFLTV +L+G                       PET+G +  ++
Sbjct:  465 YKWLSLASLLVYVAAFSIGLGPMPWLVLSEIFPGGIRGRAMALTSSMNWGVNLLISLTFLTVTDLIGLSWVCFIYTIMSLASLAFVVLFIPETKGCSLEQI 565          
BLAST of EY659932 vs. ExPASy Swiss-Prot
Match: KHT2_KLULA (Hexose transporter 2 OS=Kluyveromyces lactis GN=KHT2 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.647e-11
Identity = 61/238 (25.63%), Postives = 90/238 (37.82%), Query Frame = 2
Query:   68 LAGAGLQAFQQFTGPNTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLS-------WAFIXXXXXXXXXVYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLI--VAQTFLTVAELVGTGATXXXXXXXXXXXXXXXXXXXPETQGLTFLEVEQMWKERA--WGSSCNTESLLEHGNIS*DSL 748
            + G  +Q+FQQ TG N   YY  TI    G   +             N   T V IY++D FGR+K  L   A +   +V+ +       W              G   ++    YI  FA    P+ + + +E YP + +  C  ++   NWI   +      F+T A     G                     PET+GLT  EV++MW+E    W SS    S   +     D+L
Sbjct:  323 IMGMLIQSFQQLTGNNYFFYYGTTIFNSVGMDDSFETSIVLGI---VNFASTFVAIYVVDKFGRRKCLLWGAAAMTACMVVFASVGVTRLWPDGANHPETASKGAGNCMIVFACFYIFCFATSWAPIAYVVVAESYPLRVKAKCMAIATASNWIWGFLNGFFTPFITSAIHFYYG---YVFMGCLVAMFFYVFFFVPETKGLTLEEVQEMWEEGVLPWKSSSWVPSSRRNAGYDVDAL 554          
BLAST of EY659932 vs. ExPASy Swiss-Prot
Match: STP10_ARATH (Sugar transport protein 10 OS=Arabidopsis thaliana GN=STP10 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.457e-11
Identity = 56/223 (25.11%), Postives = 94/223 (42.15%), Query Frame = 2
Query:   29 KGASEIKFSRKGFLAGAGLQAFQQFTGPNTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXX------VYGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFLTVAELVGTGATXXXXXXXXXXXXXXXXXXXPETQGLTFLEVEQMWKE 679
            K   E K+ R   +  + +  FQQ TG N +M+Y+P + +  GF  +             N + T V IY +D +GR+ L L     + I  +L+  +FI                  WI    + +Y+A FA   GP+ W + SE+ P + R     ++ +VN     ++ Q FLT+   +  G                     PET+G+   E+ ++WK+
Sbjct:  274 KNIMESKY-RPALIFCSAIPFFQQITGINVIMFYAPVLFKTLGFGDDAALMSAVITGV-VNMLSTFVSIYAVDRYGRRLLFLEGGIQMFICQLLVG-SFIGARFGTSGTGTLTPATADWILAF-ICVYVAGFAWSWGPLGWLVPSEICPLEIRPAGQAINVSVNMFFTFLIGQFFLTMLCHMKFG-LFYFFASMVAIMTVFIYFLLPETKGVPIEEMGRVWKQ 491          
BLAST of EY659932 vs. ExPASy Swiss-Prot
Match: STP7_ARATH (Sugar transport protein 7 OS=Arabidopsis thaliana GN=STP7 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.897e-11
Identity = 47/179 (26.26%), Postives = 79/179 (44.13%), Query Frame = 2
Query:    8 PXRNFFKKGASEIKFSRKGFLAGAGLQAFQQFTGPNTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXVYGW--IAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVAQTFL 538
            P RN  +K        R   +    +  FQ  TG N++++Y+P + Q  GF  N               + T + I L+D  GR+ L ++    +II  V+++               G+  I VI + L++  F    GP+ WT+ SE++P + R     ++  VN +   I+AQ FL
Sbjct:  273 PFRNILQKR------HRPQLVMAICMPMFQILTGINSILFYAPVLFQTMGFGGNASLYSSALTG-AVLVLSTFISIGLVDRLGRRALLITGGIQMIICQVIVAVILGVKFGDNQELSKGYSVIVVIFICLFVVAFGWSWGPLGWTIPSEIFPLETRSAGQSITVAVNLLFTFIIAQAFL 444          
BLAST of EY659932 vs. ExPASy Swiss-Prot
Match: HXT5_YEAST (Probable glucose transporter HXT5 OS=Saccharomyces cerevisiae GN=HXT5 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.897e-11
Identity = 59/219 (26.94%), Postives = 86/219 (39.27%), Query Frame = 2
Query:   68 LAGAGLQAFQQFTGPNTVMYYSPTIVQMAGFQSNQXXXXXXXXXXGTNAVGTIVGIYLIDHFGRKKLALSSLAGVIISLVLLSWAFIXXXXXXXXXV-----YGWIAVIGLALYIAFFAPGMGPVPWTLNSEVYPEQYRGICGGMSATVNWISNLIVA--QTFLTVAELVGTGATXXXXXXXXXXXXXXXXXXXPETQGLTFLEVEQMWKERA--WGSS 697
            L G  +Q+ QQ TG N   YY  TI Q  G + +             N V T   +Y +D FGR+   L    G+I   V+ +   +                G   ++    YI  FA    PV + L SE YP + RG    +++  NWI   +++    F+T A     G                     PET+GLT  EV +M++E    W S+
Sbjct:  347 LMGMMIQSLQQLTGDNYFFYYGTTIFQAVGLEDSFETAIVLGV---VNFVSTFFSLYTVDRFGRRNCLLWGCVGMICCYVVYASVGVTRLWPNGQDQPSSKGAGNCMIVFACFYIFCFATTWAPVAYVLISESYPLRVRGKAMSIASACNWIWGFLISFFTPFITSAINFYYG---YVFMGCMVFAYFYVFFFVPETKGLTLEEVNEMYEENVLPWKST 559          
The following BLAST results are available for this feature:
BLAST of EY659932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
ERDL2_ARATH9.097e-1223.90Sugar transporter ERD6-like 2 OS=Arabidopsis thali... [more]
GTR12_MOUSE1.552e-1130.69Solute carrier family 2, facilitated glucose trans... [more]
KHT2_KLULA2.647e-1125.63Hexose transporter 2 OS=Kluyveromyces lactis GN=KH... [more]
STP10_ARATH3.457e-1125.11Sugar transport protein 10 OS=Arabidopsis thaliana... [more]
STP7_ARATH5.897e-1126.26Sugar transport protein 7 OS=Arabidopsis thaliana ... [more]
HXT5_YEAST5.897e-1126.94Probable glucose transporter HXT5 OS=Saccharomyces... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-F11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659932 ID=EY659932; Name=EY659932; organism=Citrus sinensis; type=EST; length=917bp
TGAGGTACCGGNCCGGAATTTTTTCAAAAAAGGCGCGTCCGAAATCAAAT
TTTCTAGAAAAGGATTTCTGGCTGGGGCTGGACTTCAGGCATTTCAGCAG
TTCACTGGTCCCAACACAGTCATGTACTACAGCCCGACAATTGTCCAAAT
GGCTGGCTTCCAGTCCAACCAGCTAGCGCTTCTCCTATCTCTTGCTGTTG
CTGGTACAAATGCAGTTGGCACAATTGTTGGAATTTATCTTATTGACCAT
TTTGGAAGGAAAAAGTTGGCCCTCTCTAGCTTAGCTGGTGTTATTATATC
CCTCGTCTTACTCTCTTGGGCATTCATCAGTGGATCATCTGCTTCTTCAA
GTGGAGTCTATGGTTGGATTGCAGTCATCGGGTTAGCCCTATATATTGCT
TTCTTTGCACCTGGAATGGGACCTGTGCCATGGACTCTGAACTCTGAGGT
GTATCCTGAGCAATACCGTGGAATTTGTGGAGGTATGTCAGCTACTGTGA
ACTGGATCTCAAATTTGATCGTGGCCCAAACCTTCCTGACGGTTGCTGAA
CTAGTGGGCACTGGAGCCACTTTCTTGATTCTTGCTGGCATTGCTGTACT
TGCAGTTGTGTTTGTGATTCTGTTTGTGCCAGAAACTCAGGGACTGACAT
TTTTGGAAGTAGAGCAGATGTGGAAAGAGAGGGCATGGGGAAGTAGTTGC
AACACAGAAAGCCTTCTCGAGCATGGAAACATTTCTTGAGACTCGTTGGT
AACTTATGTAGCTTTGGAAGAACTTTCTACCTGTTTTACATCATCAAATA
TATGCCTATGTGCATTTACGATGATGTTTTTACAACTCAATACCCATTCC
ACTGAACTATGGAATCCTCTTTATATCCATGGNTTTAGAAAAGTGGTCAG
GGCATATAACCTTTTTG
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