EY659922

Overview
NameEY659922
Unique NameEY659922
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659922 vs. ExPASy Swiss-Prot
Match: YKT6_SCHPO (Synaptobrevin homolog ykt6 OS=Schizosaccharomyces pombe GN=ykt6 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.773e-13
Identity = 46/156 (29.49%), Postives = 79/156 (50.64%), Query Frame = 3
Query:  282 KNLSRGQNEASRMSIETGPYVFH-YIIERRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNG-AQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNRQALI 743
            K ++   N   R  +E   YVFH Y     +C +   D+ YP ++A+  L  + +EF   N   + E+ A   +F + DT++ K    YQD +    I ++  EL E   ++ + ++ VL  GEKLD + + S  L+++SR++   AK  N   +I
Sbjct:   45 KTVAERTNPGQRQDVEQSNYVFHVYNRSDGLCGVIASDKEYPLRVAYTLLNKILDEFLTKNPRTKWESGAVTLSFPELDTYLSK----YQDPKQADTIMRVQQELDETKDVLHKTIESVLARGEKLDDLIQRSDNLSTQSRMFYKSAKKQNSCCII 196          
BLAST of EY659922 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.369e-12
Identity = 40/149 (26.85%), Postives = 81/149 (54.36%), Query Frame = 3
Query:  288 LSRGQNEASRMSIETGPYVFHYIIERRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNR 731
            L++  +E ++++   G Y+FHYI + R+ YL + D  + +  AF +L ++K  F+   G++ +TA  PYA   +F + +    K + +++    +A+   ++ E+  IM RN+  V   GEKL+ + + +  L   S  +   +++L R
Sbjct:   33 LAKIPSENNKLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKYHSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLAR 180          
BLAST of EY659922 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.420e-11
Identity = 38/154 (24.68%), Postives = 82/154 (53.25%), Query Frame = 3
Query:  288 LSRGQNEASRMSIETGPYVFHYIIERRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNRQALIR 746
            L++  +E ++++   G Y+FHYI + R+ YL + D  + +  AF +L ++K  F+   G++ +TA  PYA   +F + +    K + + ++   + +   ++ E+  IM RN+  V   GE+L+ + + +  L   S  +   +++L R   ++
Sbjct:   33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKHHSENQSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVK 185          
BLAST of EY659922 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.420e-11
Identity = 38/149 (25.50%), Postives = 80/149 (53.69%), Query Frame = 3
Query:  288 LSRGQNEASRMSIETGPYVFHYIIERRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNR 731
            L++  +E ++++   G Y+FHYI + R+ YL + D  + +  AF +L ++K  F+   G++ +TA  PYA   +F + +    K + + ++   + +   ++ E+  IM RN+  V   GE+L+ + + +  L   S  +   +++L R
Sbjct:   33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKHHSENKSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR 180          
BLAST of EY659922 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 5.834e-11
Identity = 38/149 (25.50%), Postives = 79/149 (53.02%), Query Frame = 3
Query:  288 LSRGQNEASRMSIETGPYVFHYIIERRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNR 731
            L++  +E ++++   G Y+FHYI + R+ YL + D  + +  AF +L ++K  F+   G++ +TA  PYA   +F + +    K + + +    + +   ++ E+  IM RN+  V   GE+L+ + + +  L   S  +   +++L R
Sbjct:   33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR 180          
BLAST of EY659922 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.834e-11
Identity = 38/149 (25.50%), Postives = 79/149 (53.02%), Query Frame = 3
Query:  288 LSRGQNEASRMSIETGPYVFHYIIERRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNR 731
            L++  +E ++++   G Y+FHYI + R+ YL + D  + +  AF +L ++K  F+   G++ +TA  PYA   +F + +    K + + +    + +   ++ E+  IM RN+  V   GE+L+ + + +  L   S  +   +++L R
Sbjct:   33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR 180          
BLAST of EY659922 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 7.620e-11
Identity = 38/149 (25.50%), Postives = 79/149 (53.02%), Query Frame = 3
Query:  288 LSRGQNEASRMSIETGPYVFHYIIERRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNR 731
            L++  +E ++++   G Y+FHYI + R+ YL + D  + +  AF +L ++K  F+   G++ +TA  PYA   +F + +    K + + +    + +   ++ E+  IM RN+  V   GE+L+ + + +  L   S  +   +++L R
Sbjct:   33 LAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR 180          
The following BLAST results are available for this feature:
BLAST of EY659922 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
YKT6_SCHPO4.773e-1329.49Synaptobrevin homolog ykt6 OS=Schizosaccharomyces ... [more]
VAMP7_CHICK2.369e-1226.85Vesicle-associated membrane protein 7 OS=Gallus ga... [more]
VAMP7_RAT3.420e-1124.68Vesicle-associated membrane protein 7 OS=Rattus no... [more]
VAMP7_MOUSE3.420e-1125.50Vesicle-associated membrane protein 7 OS=Mus muscu... [more]
VAMP7_HUMAN5.834e-1125.50Vesicle-associated membrane protein 7 OS=Homo sapi... [more]
VAMP7_BOVIN5.834e-1125.50Vesicle-associated membrane protein 7 OS=Bos tauru... [more]
VAMP7_PONAB7.620e-1125.50Vesicle-associated membrane protein 7 OS=Pongo abe... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-E12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659922 ID=EY659922; Name=EY659922; organism=Citrus sinensis; type=EST; length=911bp
TGCGGTACCGGTCCGGAATTCCTTCGATACAGAGGCGTNNGNTCTTTTCT
TTTCGTAAAAACGGGTCTTCTCTCTTCTTCAGATCGTTGAATTCGCGTAG
AAAATTTCAAACCCAAAAAGGGTGATTTGGTGTAGCAGAGGAATTTTAAA
GTGAGGCAAAAATGGTGAAGATGACGATGATTGCCCGTGTTACTGATGGT
CTTCCATTGGCGGAGGGACTGGATGATGGTCGTGATTTGAGAGATGCTGA
GATGTACAAGCAACAAGTCAAGGCCTTGTTTAAGAATCTCTCGAGAGGCC
AGAATGAGGCTTCAAGGATGTCAATTGAGACAGGACCTTATGTTTTCCAT
TATATCATTGAACGACGTGTTTGTTACTTGACAATGTGCGACCGTGCTTA
TCCCAAAAAGCTGGCCTTTCAATACTTGGAAGACCTCAAGAACGAATTTG
AGCGTGTTAATGGGGCTCAGATTGAAACTGCTGCCAGGCCTTATGCTTTC
ATAAAATTTGATACATTCATACAGAAAACAAAGAAATTGTACCAGGACAC
ACGTACCCAGCGGAATATTGCAAAGTTGAATGATGAACTTTATGAGGTCC
ACCAGATAATGACCCGGAATGTGCAGGAAGTTCTTGGTGTTGGTGAAAAG
TTGGACCAGGTCAGTGAAATGTCCAGTCGGTTGACATCAGAGTCGCGCAT
TTATGCTGATAAGGCAAAAGATTTGAATCGACAGGCTTTAATTCGGAAAT
GGGCTCCTGTGGCATTGGGGGTTGGGGGTGGGNCTCATTGTCTTTTGGCT
CAAAACAAGCTATGGTGATTTCAGTGCCCCTATGCGGNTCTAATAGTGCA
CATTGTGCCTGGGGTCTCTGCCTCAATGTGGGTTGCTGGTGTCCTGGCTC
GGTGTCACACT
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