EY659914

Overview
NameEY659914
Unique NameEY659914
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659914_ssr338 microsatellite EY659914_ssr338:338..349. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB30_ANTMA (Myb-related protein 330 OS=Antirrhinum majus GN=MYB330 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.928e-52
Identity = 90/126 (71.43%), Postives = 105/126 (83.33%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTH 499
            MGR+PCC+K+   KG WT EEDQ+LI+YI+ HG G WR+LPK AGL RCGKSCRLRW NYLRPD+KRG F  EE+E II+LHS+LGNKWS IA  LPGRTDNEIKNYWNTHI+++L+  GIDP TH
Sbjct:    1 MGRSPCCEKAHTNKGAWTKEEDQRLINYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDEIIIKLHSLLGNKWSLIAGALPGRTDNEIKNYWNTHIKRKLVSRGIDPQTH 126          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB5_ARATH (Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.229e-50
Identity = 84/124 (67.74%), Postives = 101/124 (81.45%), Query Frame = 2
Query:  134 PCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSP 505
            PCC K G+K+GPWT EED+ L+ +I+K G G WR+LPK AGL RCGKSCRLRW NYLRP +KRG    +EE+ I++LH +LGN+WS IA R+PGRTDNEIKNYWNTH+RK+LLR GIDP TH P
Sbjct:   16 PCCTKMGMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKLLRQGIDPQTHKP 139          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB2_PHYPA (Myb-related protein Pp2 OS=Physcomitrella patens GN=PP2 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.445e-49
Identity = 86/128 (67.19%), Postives = 102/128 (79.69%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSP 505
            MGR PCC+K GL++GPWT EEDQKL+ +I  +G   WR +PK AGL RCGKSCRLRWTNYLRPD+KRG F+  EE  I+ LH+ LGN+WS IAA+LPGRTDNEIKNYWNT ++KRL   G+DP TH P
Sbjct:    1 MGRKPCCEKVGLRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNYLRPDLKRGIFSEAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRSQGLDPNTHLP 128          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB86_ARATH (Transcription factor MYB86 OS=Arabidopsis thaliana GN=MYB86 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.887e-49
Identity = 85/128 (66.41%), Postives = 105/128 (82.03%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSP 505
            MGR  CC K  L+KG W+PEED+KL++YI +HG+G W ++PK AGLQRCGKSCRLRW NYLRPD+KRG F+ +EE  II+LH+ LGN+WS IA RLPGRTDNEIKN+WN+ ++K+L R GIDP TH P
Sbjct:    1 MGRHSCCFKQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGAFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLRRKGIDPTTHKP 128          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB1_MAIZE (Myb-related protein Zm1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 9.364e-49
Identity = 85/115 (73.91%), Postives = 96/115 (83.48%), Query Frame = 2
Query:  125 GRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRL 469
            GRAPCC K GL +G WTP+ED +LI YIQKHG+ NWR LPK AGL RCGKSCRLRW NYLRPD+KRG F  EEEE II+LH +LGNKWS IAA LPGRTDNEIKN WNTH++K++
Sbjct:    4 GRAPCCAKVGLNRGSWTPQEDMRLIAYIQKHGHTNWRALPKQAGLLRCGKSCRLRWINYLRPDLKRGNFTDEEEEAIIRLHGLLGNKWSKIAACLPGRTDNEIKNVWNTHLKKKV 118          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB06_ANTMA (Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 6.711e-47
Identity = 81/119 (68.07%), Postives = 97/119 (81.51%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRM 478
            MGR PCCDK G+KKGPWTPEED  L+ YIQ+HG GNWR +P N GL RC KSCRLRWTNYLRP IKRG F   EE+ II L ++LGN+W+AIA+ LP RTDN+IKNYWNTH++K+L ++
Sbjct:    1 MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAIPSNTGLLRCSKSCRLRWTNYLRPGIKRGDFTEHEEKMIIHLQALLGNRWAAIASYLPHRTDNDIKNYWNTHLKKKLEKL 119          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB15_ANTMA (Myb-related protein 315 OS=Antirrhinum majus GN=MYB315 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.145e-46
Identity = 83/128 (64.84%), Postives = 97/128 (75.78%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGIDPVTHSP 505
            M R PC +K GLK+GPWT EEDQKL  Y+ K+G   WR +PK AGL RCGKSCRLRW NYLRPD+K+G     EE  II+LH+ LGN+WS IA  +PGRTDNEIKNYWNTHI+K+L  +GIDP  H P
Sbjct:    1 MERQPCREKFGLKRGPWTEEEDQKLTSYVLKNGIQGWRVIPKLAGLSRCGKSCRLRWMNYLRPDLKKGPLTEMEENQIIELHAHLGNRWSKIALHIPGRTDNEIKNYWNTHIKKKLKLLGIDPNNHQP 128          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB12_ARATH (Transcription factor MYB12 OS=Arabidopsis thaliana GN=MYB12 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.953e-46
Identity = 80/116 (68.97%), Postives = 97/116 (83.62%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRL 469
            MGRAPCC+K G+K+G WT EEDQ L +YIQ +G G+WR+LPKNAGL+RCGKSCRLRW NYLR D+KRG    EEEE +++LHS LGN+WS IA  LPGRTDNEIKNYWN+H+ ++L
Sbjct:    1 MGRAPCCEKVGIKRGRWTAEEDQILSNYIQSNGEGSWRSLPKNAGLKRCGKSCRLRWINYLRSDLKRGNITPEEEELVVKLHSTLGNRWSLIAGHLPGRTDNEIKNYWNSHLSRKL 116          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYBP_MAIZE (Myb-related protein P OS=Zea mays GN=P PE=2 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.681e-46
Identity = 79/116 (68.10%), Postives = 97/116 (83.62%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRL 469
            MGR PCC+K GLK+G WT EEDQ L +YI +HG G+WR+LPKNAGL RCGKSCRLRW NYLR D+KRG  + EEE+ II+LH+ LGN+WS IA+ LPGRTDNEIKNYWN+H+ +++
Sbjct:    1 MGRTPCCEKVGLKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNISKEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQI 116          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 1.185e-43
Identity = 79/123 (64.23%), Postives = 97/123 (78.86%), Query Frame = 2
Query:  122 MGRAPCCDKSGLKKGPWTPEEDQKLIDYIQKHGYG-NWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGID 487
            MGRAPCCDK+ +K+GPW+PEED KL DYI+K+G G NW + P  AGL+RCGKSCRLRW NYLRP+IK G F+ EE+  I  L + +G++WS IAA LPGRTDN+IKNYWNT +RK+LL    D
Sbjct:    1 MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSSSSD 123          
The following BLAST results are available for this feature:
BLAST of EY659914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
MYB30_ANTMA6.928e-5271.43Myb-related protein 330 OS=Antirrhinum majus GN=MY... [more]
MYB5_ARATH2.229e-5067.74Transcription repressor MYB5 OS=Arabidopsis thalia... [more]
MYB2_PHYPA1.445e-4967.19Myb-related protein Pp2 OS=Physcomitrella patens G... [more]
MYB86_ARATH1.887e-4966.41Transcription factor MYB86 OS=Arabidopsis thaliana... [more]
MYB1_MAIZE9.364e-4973.91Myb-related protein Zm1 OS=Zea mays PE=2 SV=1[more]
MYB06_ANTMA6.711e-4768.07Myb-related protein 306 OS=Antirrhinum majus GN=MY... [more]
MYB15_ANTMA1.145e-4664.84Myb-related protein 315 OS=Antirrhinum majus GN=MY... [more]
MYB12_ARATH1.953e-4668.97Transcription factor MYB12 OS=Arabidopsis thaliana... [more]
MYBP_MAIZE5.681e-4668.10Myb-related protein P OS=Zea mays GN=P PE=2 SV=1[more]
RAX1_ARATH1.185e-4364.23Transcription factor RAX1 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659914 ID=EY659914; Name=EY659914; organism=Citrus sinensis; type=EST; length=926bp
AAGTGGTAGCCTGCAGTACGGNNAGGAATTTTTCATATGGGGGNGTNNGT
AAAAATATTCCTAAACAGGAGGTTAATTAAATTAGAAGATTTCTAGAGGA
ACTCTTACTAGTTTTAACCCGATGGGAAGAGCACCGTGCTGTGATAAAAG
CGGGCTTAAGAAAGGGCCATGGACACCAGAGGAAGATCAGAAGTTGATAG
ATTACATTCAAAAACACGGCTACGGGAATTGGAGAACACTTCCAAAGAAT
GCCGGTTTGCAAAGATGTGGAAAGAGCTGCCGTCTCCGCTGGACTAACTA
TTTGCGACCGGATATCAAGAGAGGCAGATTTGCTTTTGAAGAAGAAGAAA
CAATAATTCAGCTACATAGTATATTGGGGAACAAGTGGTCTGCAATTGCT
GCTCGCTTGCCTGGAAGAACAGACAATGAAATCAAGAACTACTGGAACAC
TCACATTAGAAAAAGGCTTCTTCGTATGGGAATCGATCCAGTTACTCATA
GCCCTCGTCTTGATCTCCTTGATCTATCTTCGATTCTAAGCTCATCTTTT
TACAGTTCATCTCAAATGAACATTTCGAGGCTTGTCGGGGCGCAGACTTT
AGTTAACCCAGAGCTACTAAGATTGGCCACATCTCTTATGTCAACGCATC
ATCACCGCGAAAACCAAAACCAAATCCAAAAATTTATTTATCAAAATTTT
CAAGAAACCAATATCAGCAATTAGTCCAACCTGATAGTCACCAACTTCAG
ATTCCACTTGAAGCTTGCTGCACATTGACTCCTCCTCCCTCCTCTTGTGG
TTCTCATTCTAATGATCAAGCACAACTAATGAACTCTAATGTAGAGGCAT
TCCCAACAATTTCACCAACTTTAGCAACAAAATTGTCAACAAAGTGATGG
GAGAGCATGGGATTGCCTCGAACTGA
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