EY659914

Overview
NameEY659914
Unique NameEY659914
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659914_ssr338 microsatellite EY659914_ssr338:338..349. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.896e-33
Identity = 64/103 (62.14%), Postives = 79/103 (76.70%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRK 463
            ++KGPWT EED  LI+YI  HG G W +L K+AGL+R GKSCRLRW NYLRPD++RG    EE+  I++LH+  GN+WS IA  LPGRTDNEIKN+W T I+K
Sbjct:   20 VRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQK 122          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYBA2_ORYSJ (Myb-related protein MYBAS2 OS=Oryza sativa subsp. japonica GN=MYBAS2 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 5.162e-31
Identity = 59/104 (56.73%), Postives = 76/104 (73.08%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            ++KGPWT +ED +L+  ++  G   W  + K +GL R GKSCRLRW NYL P +KRGR +  EE  I++LH+  GN+WS IA RLPGRTDNEIKNYW TH+RK+
Sbjct:    8 IRKGPWTEQEDLQLVCTVRLFGERRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGRMSPHEERLILELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKK 111          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.742e-31
Identity = 57/107 (53.27%), Postives = 77/107 (71.96%), Query Frame = 2
Query:  146 KSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            + G +KGPWT +ED  L++++   G   W  + K +GL R GKSCRLRW NYL P +KRG+   +EE  +++LH+  GN+WS IA +LPGRTDNEIKNYW TH+RK+
Sbjct:    4 EEGNRKGPWTEQEDILLVNFVHLFGDRRWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK 110          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.502e-30
Identity = 59/104 (56.73%), Postives = 76/104 (73.08%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            ++KGPWT +ED +L+  ++  G   W  + K +GL R GKSCRLRW NYL P +K GR + +EE  II+LH+  GN+WS IA RLPGRTDNEIKNYW TH+RK+
Sbjct:    8 MRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKHGRMSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKK 111          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2)

HSP 1 Score: 132.88 bits (333), Expect = 2.562e-30
Identity = 56/103 (54.37%), Postives = 75/103 (72.82%), Query Frame = 2
Query:  158 KKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            +KGPWT +ED  L++++   G   W  + K +GL R GKSCRLRW NYL P +KRG+   +EE  +++LH+  GN+WS IA +LPGRTDNEIKNYW TH+RK+
Sbjct:    9 RKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKK 111          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 2.030e-27
Identity = 56/113 (49.56%), Postives = 73/113 (64.60%), Query Frame = 2
Query:  146 KSGLKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGI 484
            K    K  W PEED+ L DY+ ++G   W  +PK  GL     SCR RW N+L+P +K+G F  EEE+ ++QLH++LGNKWS +A   PGRTDNEIKN+WN   R RL   G+
Sbjct:   13 KKTFTKSKWKPEEDRILKDYVIQYGDRTWTHVPKRTGLPHNPASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFWNAR-RMRLKGKGL 124          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB_AVIMB (Transforming protein Myb OS=Avian myeloblastosis virus GN=V-MYB PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 2.481e-25
Identity = 51/109 (46.79%), Postives = 75/109 (68.81%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG 481
            L KGPWT EEDQ++I+++QK+G   W  + K+    R GK CR RW N+L P++K+  +  EE+  I Q H  LGN+W+ IA  LPGRTDN +KN+WN+ +R+++ + G
Sbjct:   19 LNKGPWTKEEDQRVIEHVQKYGPKRWSDIAKHLK-GRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAVKNHWNSTMRRKVEQEG 126          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYBB_CHICK (Myb-related protein B OS=Gallus gallus GN=MYBL2 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 3.241e-25
Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRL 469
            L KGPWT EEDQK+I+ ++K+G   W  + K+    R GK CR RW N+L P++K+  +  EE+  I + H +LGN+W+ IA  LPGRTDN +KN+WN+ I++++
Sbjct:   81 LVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLK-GRLGKQCRERWHNHLNPEVKKSSWTEEEDRIIFEAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKV 184          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYBB_XENLA (Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 4.233e-25
Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRL 469
            L KGPWT EED+K+I+ ++K+G  +W  + K     R GK CR RW N+L P++K+  +  EE+  I Q H +LGN+W+ IA  LPGRTDN +KN+WN+ I++++
Sbjct:   81 LVKGPWTKEEDEKVIELVKKYGTKHWTLIAKQLR-GRMGKQCRERWHNHLNPEVKKSSWTEEEDRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRKV 184          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYBB_MOUSE (Myb-related protein B OS=Mus musculus GN=Mybl2 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.528e-25
Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRL 469
            L KGPWT EEDQK+I+ ++K+G   W  + K+    R GK CR RW N+L P++K+  +  EE+  I + H +LGN+W+ IA  LPGRTDN +KN+WN+ I++++
Sbjct:   81 LVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLK-GRLGKQCRERWHNHLNPEVKKSCWTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNSTIKRKV 184          
The following BLAST results are available for this feature:
BLAST of EY659914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
MYB21_ARATH1.896e-3362.14Transcription factor MYB21 OS=Arabidopsis thaliana... [more]
MYBA2_ORYSJ5.162e-3156.73Myb-related protein MYBAS2 OS=Oryza sativa subsp. ... [more]
MYB48_ARATH6.742e-3153.27Transcription factor MYB48 OS=Arabidopsis thaliana... [more]
MYBA1_ORYSJ1.502e-3056.73Myb-related protein MYBAS1 OS=Oryza sativa subsp. ... [more]
MYB59_ARATH2.562e-3054.37Transcription factor MYB59 OS=Arabidopsis thaliana... [more]
MY104_ARATH2.030e-2749.56Transcription factor MYB104 OS=Arabidopsis thalian... [more]
MYB_AVIMB2.481e-2546.79Transforming protein Myb OS=Avian myeloblastosis v... [more]
MYBB_CHICK3.241e-2546.67Myb-related protein B OS=Gallus gallus GN=MYBL2 PE... [more]
MYBB_XENLA4.233e-2546.67Myb-related protein B OS=Xenopus laevis GN=mybl2 P... [more]
MYBB_MOUSE5.528e-2546.67Myb-related protein B OS=Mus musculus GN=Mybl2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659914 ID=EY659914; Name=EY659914; organism=Citrus sinensis; type=EST; length=926bp
AAGTGGTAGCCTGCAGTACGGNNAGGAATTTTTCATATGGGGGNGTNNGT
AAAAATATTCCTAAACAGGAGGTTAATTAAATTAGAAGATTTCTAGAGGA
ACTCTTACTAGTTTTAACCCGATGGGAAGAGCACCGTGCTGTGATAAAAG
CGGGCTTAAGAAAGGGCCATGGACACCAGAGGAAGATCAGAAGTTGATAG
ATTACATTCAAAAACACGGCTACGGGAATTGGAGAACACTTCCAAAGAAT
GCCGGTTTGCAAAGATGTGGAAAGAGCTGCCGTCTCCGCTGGACTAACTA
TTTGCGACCGGATATCAAGAGAGGCAGATTTGCTTTTGAAGAAGAAGAAA
CAATAATTCAGCTACATAGTATATTGGGGAACAAGTGGTCTGCAATTGCT
GCTCGCTTGCCTGGAAGAACAGACAATGAAATCAAGAACTACTGGAACAC
TCACATTAGAAAAAGGCTTCTTCGTATGGGAATCGATCCAGTTACTCATA
GCCCTCGTCTTGATCTCCTTGATCTATCTTCGATTCTAAGCTCATCTTTT
TACAGTTCATCTCAAATGAACATTTCGAGGCTTGTCGGGGCGCAGACTTT
AGTTAACCCAGAGCTACTAAGATTGGCCACATCTCTTATGTCAACGCATC
ATCACCGCGAAAACCAAAACCAAATCCAAAAATTTATTTATCAAAATTTT
CAAGAAACCAATATCAGCAATTAGTCCAACCTGATAGTCACCAACTTCAG
ATTCCACTTGAAGCTTGCTGCACATTGACTCCTCCTCCCTCCTCTTGTGG
TTCTCATTCTAATGATCAAGCACAACTAATGAACTCTAATGTAGAGGCAT
TCCCAACAATTTCACCAACTTTAGCAACAAAATTGTCAACAAAGTGATGG
GAGAGCATGGGATTGCCTCGAACTGA
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