EY659914

Overview
NameEY659914
Unique NameEY659914
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659914_ssr338 microsatellite EY659914_ssr338:338..349. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYBB_HUMAN (Myb-related protein B OS=Homo sapiens GN=MYBL2 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.528e-25
Identity = 49/105 (46.67%), Postives = 73/105 (69.52%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRL 469
            L KGPWT EEDQK+I+ ++K+G   W  + K+    R GK CR RW N+L P++K+  +  EE+  I + H +LGN+W+ IA  LPGRTDN +KN+WN+ I++++
Sbjct:   81 LVKGPWTKEEDQKVIELVKKYGTKQWTLIAKHLK-GRLGKQCRERWHNHLNPEVKKSCWTEEEDRIICEAHKVLGNRWAEIAKMLPGRTDNAVKNHWNSTIKRKV 184          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB_MOUSE (Myb proto-oncogene protein OS=Mus musculus GN=Myb PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.220e-25
Identity = 52/109 (47.71%), Postives = 74/109 (67.89%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG 481
            L KGPWT EEDQ++I+ +QK+G   W  + K+    R GK CR RW N+L P++K+  +  EE+  I Q H  LGN+W+ IA  LPGRTDN IKN+WN+ +R+++ + G
Sbjct:   90 LIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLK-GRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEG 197          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB_HUMAN (Myb proto-oncogene protein OS=Homo sapiens GN=MYB PE=1 SV=2)

HSP 1 Score: 114.775 bits (286), Expect = 7.220e-25
Identity = 52/109 (47.71%), Postives = 74/109 (67.89%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG 481
            L KGPWT EEDQ++I+ +QK+G   W  + K+    R GK CR RW N+L P++K+  +  EE+  I Q H  LGN+W+ IA  LPGRTDN IKN+WN+ +R+++ + G
Sbjct:   90 LIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLK-GRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEG 197          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB_CHICK (Myb proto-oncogene protein OS=Gallus gallus GN=MYB PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.220e-25
Identity = 52/109 (47.71%), Postives = 74/109 (67.89%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG 481
            L KGPWT EEDQ++I+ +QK+G   W  + K+    R GK CR RW N+L P++K+  +  EE+  I Q H  LGN+W+ IA  LPGRTDN IKN+WN+ +R+++ + G
Sbjct:   90 LIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLK-GRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEG 197          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB_BOVIN (Myb proto-oncogene protein OS=Bos taurus GN=MYB PE=2 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 7.220e-25
Identity = 52/109 (47.71%), Postives = 74/109 (67.89%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG 481
            L KGPWT EEDQ++I+ +QK+G   W  + K+    R GK CR RW N+L P++K+  +  EE+  I Q H  LGN+W+ IA  LPGRTDN IKN+WN+ +R+++ + G
Sbjct:   90 LIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLK-GRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRKVEQEG 197          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYBA_MOUSE (Myb-related protein A OS=Mus musculus GN=Mybl1 PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 9.429e-25
Identity = 51/109 (46.79%), Postives = 74/109 (67.89%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG 481
            L KGPWT EEDQ++I+ +QK+G   W  + K+    R GK CR RW N+L P++K+  +  EE+  I + H  LGN+W+ IA  LPGRTDN IKN+WN+ +R+++ + G
Sbjct:   85 LIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLK-GRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEG 192          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYBA_HUMAN (Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=1 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 9.429e-25
Identity = 51/109 (46.79%), Postives = 74/109 (67.89%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG 481
            L KGPWT EEDQ++I+ +QK+G   W  + K+    R GK CR RW N+L P++K+  +  EE+  I + H  LGN+W+ IA  LPGRTDN IKN+WN+ +R+++ + G
Sbjct:   85 LIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLK-GRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEG 192          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYB_XENLA (Myb protein OS=Xenopus laevis GN=myb PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.608e-24
Identity = 50/104 (48.08%), Postives = 71/104 (68.27%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKR 466
            L KGPWT EEDQ++I+ + K+G   W  + K+    R GK CR RW N+L P++K+  +  EE+ TI + H  LGN+W+ IA  LPGRTDN IKN+WN+ +R++
Sbjct:   87 LIKGPWTKEEDQRVIELVHKYGPKRWSVIAKHLK-GRIGKQCRERWHNHLNPEVKKSSWTEEEDRTIYEAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 189          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYBA_CHICK (Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.583e-24
Identity = 50/109 (45.87%), Postives = 73/109 (66.97%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG 481
            L KGPWT EEDQ++I+ +QK+G   W  + K+    R GK CR RW N+L P++K+  +   E+  I + H  LGN+W+ IA  LPGRTDN IKN+WN+ +R+++ + G
Sbjct:   85 LIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLK-GRIGKQCRERWHNHLNPEVKKSSWTEAEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRKVEQEG 192          
BLAST of EY659914 vs. ExPASy Swiss-Prot
Match: MYBA_XENLA (Myb-related protein A OS=Xenopus laevis GN=mybl1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 6.112e-24
Identity = 49/109 (44.95%), Postives = 72/109 (66.06%), Query Frame = 2
Query:  155 LKKGPWTPEEDQKLIDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFAFEEEETIIQLHSILGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMG 481
            L KGPWT EEDQ++I+ + K+G   W  + K+    R GK CR RW N+L PD+K+  +  EE+  I   H  +GN+W+ IA  LPGRTDN IKN+WN+ +++++ + G
Sbjct:   84 LVKGPWTKEEDQRVIELVHKYGPKKWSIIAKHLK-GRIGKQCRERWHNHLNPDVKKSSWTEEEDRIIYSAHKRMGNRWAEIAKLLPGRTDNSIKNHWNSTMKRKVEQEG 191          
The following BLAST results are available for this feature:
BLAST of EY659914 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 74
Match NameE-valueIdentityDescription
MYBB_HUMAN5.528e-2546.67Myb-related protein B OS=Homo sapiens GN=MYBL2 PE=... [more]
MYB_MOUSE7.220e-2547.71Myb proto-oncogene protein OS=Mus musculus GN=Myb ... [more]
MYB_HUMAN7.220e-2547.71Myb proto-oncogene protein OS=Homo sapiens GN=MYB ... [more]
MYB_CHICK7.220e-2547.71Myb proto-oncogene protein OS=Gallus gallus GN=MYB... [more]
MYB_BOVIN7.220e-2547.71Myb proto-oncogene protein OS=Bos taurus GN=MYB PE... [more]
MYBA_MOUSE9.429e-2546.79Myb-related protein A OS=Mus musculus GN=Mybl1 PE=... [more]
MYBA_HUMAN9.429e-2546.79Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=... [more]
MYB_XENLA1.608e-2448.08Myb protein OS=Xenopus laevis GN=myb PE=2 SV=1[more]
MYBA_CHICK3.583e-2445.87Myb-related protein A OS=Gallus gallus GN=MYBL1 PE... [more]
MYBA_XENLA6.112e-2444.95Myb-related protein A OS=Xenopus laevis GN=mybl1 P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-E04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659914 ID=EY659914; Name=EY659914; organism=Citrus sinensis; type=EST; length=926bp
AAGTGGTAGCCTGCAGTACGGNNAGGAATTTTTCATATGGGGGNGTNNGT
AAAAATATTCCTAAACAGGAGGTTAATTAAATTAGAAGATTTCTAGAGGA
ACTCTTACTAGTTTTAACCCGATGGGAAGAGCACCGTGCTGTGATAAAAG
CGGGCTTAAGAAAGGGCCATGGACACCAGAGGAAGATCAGAAGTTGATAG
ATTACATTCAAAAACACGGCTACGGGAATTGGAGAACACTTCCAAAGAAT
GCCGGTTTGCAAAGATGTGGAAAGAGCTGCCGTCTCCGCTGGACTAACTA
TTTGCGACCGGATATCAAGAGAGGCAGATTTGCTTTTGAAGAAGAAGAAA
CAATAATTCAGCTACATAGTATATTGGGGAACAAGTGGTCTGCAATTGCT
GCTCGCTTGCCTGGAAGAACAGACAATGAAATCAAGAACTACTGGAACAC
TCACATTAGAAAAAGGCTTCTTCGTATGGGAATCGATCCAGTTACTCATA
GCCCTCGTCTTGATCTCCTTGATCTATCTTCGATTCTAAGCTCATCTTTT
TACAGTTCATCTCAAATGAACATTTCGAGGCTTGTCGGGGCGCAGACTTT
AGTTAACCCAGAGCTACTAAGATTGGCCACATCTCTTATGTCAACGCATC
ATCACCGCGAAAACCAAAACCAAATCCAAAAATTTATTTATCAAAATTTT
CAAGAAACCAATATCAGCAATTAGTCCAACCTGATAGTCACCAACTTCAG
ATTCCACTTGAAGCTTGCTGCACATTGACTCCTCCTCCCTCCTCTTGTGG
TTCTCATTCTAATGATCAAGCACAACTAATGAACTCTAATGTAGAGGCAT
TCCCAACAATTTCACCAACTTTAGCAACAAAATTGTCAACAAAGTGATGG
GAGAGCATGGGATTGCCTCGAACTGA
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