EY659904
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 6.166e-34 Identity = 70/120 (58.33%), Postives = 80/120 (66.67%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYF--TPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397 RHGYFHVVNNDYT W MYAIGGSA PTINSQGNR+ AP + KEVTK D SQW+ WNWRSEGDL+LNGAYF T + SS+VGSIT+ AG + C+K +C Sbjct: 285 RHGYFHVVNNDYTHWEMYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFRQTGAGASSSSTYARASSLSARPSSLVGSITTNAGPVNCKKGSRC 404
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL_ZINEL (Pectate lyase OS=Zinnia elegans PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.374e-33 Identity = 68/118 (57.63%), Postives = 78/118 (66.10%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397 RHGYFHVVNNDYT W MYAIGGSA+PTI SQGNR+ AP F KEVTK + S+WK WNWRSEGDL+LNGAYF + S++V S+T AGAL CRK +C Sbjct: 284 RHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFDKEVTKHENAPESEWKNWNWRSEGDLMLNGAYFRESGGRAASSFARASSLSGRPSTLVASMTRSAGALVCRKGSRC 401
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.163e-32 Identity = 68/120 (56.67%), Postives = 80/120 (66.67%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFT--PXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397 RHGYFHVVNNDYT W MYAIGGSANPTINSQGNR+ AP ++ +KEVTK D +W+ WNWRSEGDLLLNGA+FT + SS VG IT +GAL+C++ C Sbjct: 313 RHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAFFTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL12_ARATH (Probable pectate lyase 12 OS=Arabidopsis thaliana GN=At3g53190 PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 4.419e-32 Identity = 65/110 (59.09%), Postives = 73/110 (66.36%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGAL 373 R GY HVVNND+T W MYAIGGS NPTINSQGNRY AP N FAKEVTKRV+T WKGWNWRSEGD+L+NGA+F KS+S + IT +G L Sbjct: 305 RRGYIHVVNNDFTQWEMYAIGGSGNPTINSQGNRYTAPTNPFAKEVTKRVETPDGDWKGWNWRSEGDILVNGAFFVASGEGAEMRYEKAYSVEPKSASFITQITFHSGVL 414
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL13_ARATH (Probable pectate lyase 13 OS=Arabidopsis thaliana GN=PMR6 PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.509e-27 Identity = 59/109 (54.13%), Postives = 71/109 (65.14%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTA-ASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAG 367 R GY HVVNND+T W MYAIGGS NPTINSQGNRY+AP + AKEVTKRVD+ +W WNWR+EGDL+ NGA+F K++S+V +T AG Sbjct: 302 RRGYIHVVNNDFTEWKMYAIGGSGNPTINSQGNRYSAPSDPSAKEVTKRVDSKDDGEWSNWNWRTEGDLMENGAFFVASGEGMSSMYSKASSVDPKAASLVDQLTRNAG 410
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL3_ARATH (Probable pectate lyase 3 OS=Arabidopsis thaliana GN=AT59 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.006e-25 Identity = 59/124 (47.58%), Postives = 69/124 (55.65%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYF------TPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397 R+G HVVNNDYT W MYAIGG+ NPTI SQGNR+ AP N AK++TKR T +WK WNW+SEGD LNGAYF K +MV +T AG L C+ C Sbjct: 336 RYGTIHVVNNDYTHWEMYAIGGNMNPTIISQGNRFIAPPNEEAKQITKREYTPYGEWKSWNWQSEGDYFLNGAYFVQSGKANAWSSKPKTPLPNKFTIRPKPGTMVRKLTMDAGVLGCKLGEAC 459
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL21_ARATH (Putative pectate lyase 21 OS=Arabidopsis thaliana GN=At5g55720 PE=2 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 6.833e-25 Identity = 56/119 (47.06%), Postives = 70/119 (58.82%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDT-AASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397 RHGYFH+VNN Y W MYAIGGSANPTI SQGN + A N F KEVTKR +WK WNW+SEGD ++NGA+FTP + +S++ + G L+C + C Sbjct: 274 RHGYFHIVNNIYRDWKMYAIGGSANPTIFSQGNVFIASNNQFTKEVTKRESADGDEEWKEWNWKSEGDEMVNGAFFTPSGKEDSPSYAKFSSMVARPASLLKTTHPSVGVLSCEIDQAC 392
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL_LILLO (Pectate lyase OS=Lilium longiflorum PE=2 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.429e-24 Identity = 53/118 (44.92%), Postives = 71/118 (60.17%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397 R+G+ HVVNNDYT W MYA+GGS +PTI SQGNRY AP AKEVTKR ++W W W+S+GDL ++GA+F K + V +T +GAL C+++ +C Sbjct: 317 RYGFVHVVNNDYTHWIMYAVGGSQHPTIISQGNRYIAPHIEAAKEVTKRDYAEPAEWSKWTWKSQGDLFVSGAFFVESGGPFENKYSKKDLIKAKPGTFVQRLTRFSGALNCKENMEC 434
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL59_SOLLC (Probable pectate lyase P59 OS=Solanum lycopersicum GN=LAT59 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.861e-22 Identity = 56/120 (46.67%), Postives = 67/120 (55.83%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSM--VGSITSGAGALTCRKSRQC 397 R GY HVVNNDYT W MYAIGGS +PTI QGNR+ AP + F K+VTKR S W W WRSEG+L +NGAYFT ++ V +T AG L C+ + C Sbjct: 330 RWGYIHVVNNDYTHWNMYAIGGSMHPTIIHQGNRFIAPPDIFKKQVTKREYNPESVWMQWTWRSEGNLFMNGAYFTESGDPEWSSKHKDLYDGISAAPAEDVTWMTRFAGVLGCKPGKPC 449
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL6_ARATH (Probable pectate lyase 6 OS=Arabidopsis thaliana GN=At2g02720 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 3.174e-22 Identity = 56/124 (45.16%), Postives = 66/124 (53.23%), Query Frame = 2 Query: 44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXK------SSSMVGSITSGAGALTCRKSRQC 397 R G HVVNNDYT W MYAIGG+ NPTI SQGNR+ AP +K+VTKR T +WK WNW+SE D LNGAYF K + V +T AG L C+ + C Sbjct: 332 RFGLVHVVNNDYTHWEMYAIGGNMNPTIISQGNRFIAPPIEDSKQVTKREYTPYPEWKSWNWQSEKDYFLNGAYFVQSGKANAWSATPKNPIPRKFAIRPQPGTKVRRLTKDAGTLGCKPGKSC 455 The following BLAST results are available for this feature:
BLAST of EY659904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659904 ID=EY659904; Name=EY659904; organism=Citrus sinensis; type=EST; length=890bpback to top |