EY659904

Overview
NameEY659904
Unique NameEY659904
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL7_ARATH (Probable pectate lyase 7 OS=Arabidopsis thaliana GN=At3g01270 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.206e-21
Identity = 55/120 (45.83%), Postives = 67/120 (55.83%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLN-AFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSM-VGSITSGAGALTCRKSRQC 397
            R G+ HVVNNDYT W +YAIGGS  PTI S GNR+ AP +    +EVTKR   + S+WK WNWRSE D+ +N AYF                     + M V  +T  AGAL CR  + C
Sbjct:  356 RWGFVHVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKQHYREVTKRDYASESEWKNWNWRSEKDVFMNNAYFRQSGNPHFKCSHSRQQMIKPKNGMAVSKLTKYAGALDCRVGKAC 475          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL19_ARATH (Putative pectate lyase 19 OS=Arabidopsis thaliana GN=At5g15110 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.206e-21
Identity = 55/120 (45.83%), Postives = 68/120 (56.67%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLN-AFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYF-TPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397
            R G+ HVVNNDYT W +YAIGGS  PTI S GNR+ AP +    +EVTKR   +  +WK WNWRS+ D+ +NGAYF                    K+   V  +T  AGAL CR  R+C
Sbjct:  353 RWGFVHVVNNDYTHWELYAIGGSQGPTILSHGNRFIAPPHKPHYREVTKRDYASEDEWKHWNWRSDKDVFMNGAYFRQSGNPQYKCAHTRQQMIKPKNGLAVSKLTKYAGALDCRVGRRC 472          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL_TOBAC (Pectate lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.971e-20
Identity = 56/121 (46.28%), Postives = 67/121 (55.37%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAAS--QWKGWNWRSEGDLLLNGAYFTP-XXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397
            R G+FH+VNNDYT W  YAIGGS+  TI SQGNR+ A      KEVT R    AS  +W  W W S+GD + NGA FTP                  + SS VG +T  +GAL+C K R C
Sbjct:  277 RFGFFHLVNNDYTHWERYAIGGSSGATIISQGNRFIAEDELLVKEVTYREKLTASVAEWMKWTWISDGDDMENGATFTPSGDQNLLDKIDHLNLIKPEPSSKVGILTKFSGALSCVKGRPC 397          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL56_SOLLC (Probable pectate lyase P56 OS=Solanum lycopersicum GN=LAT56 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.290e-19
Identity = 53/121 (43.80%), Postives = 67/121 (55.37%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAAS--QWKGWNWRSEGDLLLNGAYFTP-XXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397
            R G+FH+VNNDYT W  YAIGGS+  TI SQGNR+ A      KEVT R  + +S  +W  W W ++GD   NGA FTP                  + SS VG +T  +GAL+C+  R C
Sbjct:  278 RFGFFHLVNNDYTHWERYAIGGSSGATIISQGNRFIAEDKLLVKEVTYREKSTSSVEEWMKWTWITDGDDFENGATFTPSGDQNLLSKIDHLNLIQPEPSSKVGLLTKFSGALSCKIRRPC 398          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL4_ARATH (Probable pectate lyase 4 OS=Arabidopsis thaliana GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.317e-19
Identity = 51/118 (43.22%), Postives = 62/118 (52.54%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397
            R GY HV NN Y  W MYAIGGSANP I S+GN + AP    +K+VTKR+  A    K W W +  D+ +NGA+F P                    S+V S+TS AG L C   R C
Sbjct:  252 RRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEKRSSKQVTKRM-MAGPDSKRWKWGTSRDVFMNGAFFGPPGVIVRPLYKGGEGFRVAHGSLVPSLTSSAGPLRCYVGRIC 368          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: MPAA2_AMBAR (Pollen allergen Amb a 2 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.129e-18
Identity = 48/128 (37.50%), Postives = 63/128 (49.22%), Query Frame = 2
Query:   17 SAHS*LEKRRHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYF-TPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397
            + H  + + R G+F +VNN Y  W  YAIGGS+NPTI SQGN++ AP   + K V  R      +W  WNWR++ D+L NGA F                    +   MV  +T  AG LTC     C
Sbjct:  270 TVHERMPRCRFGFFQIVNNFYDRWDKYAIGGSSNPTILSQGNKFVAPDFIYKKNVCLRTGAQEPEWMTWNWRTQNDVLENGAIFVASGSDPVLTAEQNAGMMQAEPGDMVPQLTMNAGVLTCSPGAPC 397          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL17_ARATH (Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.781e-18
Identity = 48/119 (40.34%), Postives = 64/119 (53.78%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKS-SSMVGSITSGAGALTCRKSRQC 397
            R GY HV NN Y  W MYAIGGSA+PTI S+GN + A   +++KEVTKR       W  W WR+  D+  NGA+F P                  +  ++V S+T+ AG L C ++  C
Sbjct:  277 RRGYAHVANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKR--EVKGGWNNWRWRTSNDVFKNGAFFVPSGYGSIPLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: MPAC1_CHAOB (Major pollen allergen Cha o 1 OS=Chamaecyparis obtusa PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.743e-18
Identity = 52/132 (39.39%), Postives = 70/132 (53.03%), Query Frame = 2
Query:   11 GASAHS*LEKRRHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVD-TAASQWKGWNWRSEGDLLLNGAYF-TPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQCS 400
            G +A   + + R+G  HV NN+Y  W +YAIGGS+NPTI S+GN + AP ++  KEVT+RV   + S    W WRS  D   NGAYF +                  ++ S    +T  AG LTC  S+ CS
Sbjct:  244 GPNAGQRMPRARYGLIHVANNNYDPWSIYAIGGSSNPTILSEGNSFTAPNDSDKKEVTRRVGCESPSTCANWVWRSTQDSFNNGAYFVSSGKNEGTNIYNNNEAFKVENGSAAPQLTKNAGVLTCILSKPCS 375          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL16_ARATH (Probable pectate lyase 16 OS=Arabidopsis thaliana GN=At4g22080 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.090e-18
Identity = 49/119 (41.18%), Postives = 63/119 (52.94%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKS-SSMVGSITSGAGALTCRKSRQC 397
            R GY HV NN Y  W MYAIGGSA+PTI S+GN + A   + +KEVTKR       W  W WR+  D+  NGAYF P                  +  ++V S+T+ AG L C ++  C
Sbjct:  277 RRGYAHVANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKR--EVKGGWNNWRWRTSKDVFKNGAYFVPSGYGSISLPYSSAQRFTVAPGNLVPSLTADAGPLNCNRNGPC 393          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: MPA12_AMBAR (Pollen allergen Amb a 1.2 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.057e-17
Identity = 49/119 (41.18%), Postives = 62/119 (52.10%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYFTP-XXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397
            R G+F VVNN+Y  W  YAIGGS+ PTI SQGNR+ AP +   K V  R  T  ++   WNWR++ DLL NGA F P                  +    V  +TS AG L+C +   C
Sbjct:  280 RFGFFQVVNNNYDRWGTYAIGGSSAPTILSQGNRFFAPDDIIKKNVLARTGTGNAESMSWNWRTDRDLLENGAIFLPSGSDPVLTPEQKAGMIPAEPGEAVLRLTSSAGVLSCHQGAPC 398          
The following BLAST results are available for this feature:
BLAST of EY659904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
PEL7_ARATH1.206e-2145.83Probable pectate lyase 7 OS=Arabidopsis thaliana G... [more]
PEL19_ARATH1.206e-2145.83Putative pectate lyase 19 OS=Arabidopsis thaliana ... [more]
PEL_TOBAC2.971e-2046.28Pectate lyase OS=Nicotiana tabacum PE=2 SV=1[more]
PEL56_SOLLC4.290e-1943.80Probable pectate lyase P56 OS=Solanum lycopersicum... [more]
PEL4_ARATH7.317e-1943.22Probable pectate lyase 4 OS=Arabidopsis thaliana G... [more]
MPAA2_AMBAR2.129e-1837.50Pollen allergen Amb a 2 OS=Ambrosia artemisiifolia... [more]
PEL17_ARATH2.781e-1840.34Putative pectate lyase 17 OS=Arabidopsis thaliana ... [more]
MPAC1_CHAOB4.743e-1839.39Major pollen allergen Cha o 1 OS=Chamaecyparis obt... [more]
PEL16_ARATH8.090e-1841.18Probable pectate lyase 16 OS=Arabidopsis thaliana ... [more]
MPA12_AMBAR1.057e-1741.18Pollen allergen Amb a 1.2 OS=Ambrosia artemisiifol... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-D06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659904 ID=EY659904; Name=EY659904; organism=Citrus sinensis; type=EST; length=890bp
TTTCAAAGAAGGCGCGTCCGCTCATTCTTGACTAGAAAAGAGGAGACATG
GTTATTTCCATGTGGTGAACAATGACTACACTCTCTGGCCCATGTATGCC
ATTGGTGGAAGTGCAAACCCCACCATCAACAGCCAGGGAAACAGATACAA
TGCTCCATTGAATGCCTTCGCAAAGGAGGTAACAAAGAGGGTGGACACAG
CTGCAAGCCAGTGGAAGGGCTGGAACTGGAGATCTGAAGGAGACCTCTTG
CTGAACGGTGCCTACTTTACCCCATCCGGAGCAGGAGCCTCAGCTAGCTA
TGCTCGTGCTTCAAGCTTGGGAGCCAAGTCTTCCTCCATGGTTGGATCCA
TTACTTCTGGTGCTGGTGCTCTTACTTGCCGCAAGAGCCGTCAGTGCTCA
TAGTATTCATCATTAAATTGGCCGAAAAAAGAAATGGCCATCGAATTTCT
GTTTTGTTTTTCATTTTTCTTCTATATAGTATATCACCTATCCAATTTAT
CCACAATCTGGTCATTGTTTCAATCTCTACCGTATATCTGCTTCACATAT
TTTGACAAGTGTACATTATTGCACATGTCATTGTATTGCCTCACCCAGTT
TGTTTATCAGTTACTTGCTCAACCTCGGCCTGCTTCAACTGAAAAAACAA
ACATTTGCATTCCCAGAAGCAGGTGCGGAAGTGTTGTTCATTTTATTTTC
CCTCTTTGGCCTCTTTTTTCAGCCTCAATTCTCATTTCCTTCTAACTAGC
ACTTGNCTATTTGTGTCCAGTGTCAGTCAGCTGTCAACTGTCAATCTTGG
TCTCTCTACATACTCTCTTTTTCATTTTTGGCTTTTGGGGTTATAGGGTC
GGAATGATTTTGTGCTTTTTCTCCCGCCTCTTTGTTGTGC
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