EY659904

Overview
NameEY659904
Unique NameEY659904
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: PEL2_ARATH (Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.380e-17
Identity = 53/125 (42.40%), Postives = 64/125 (51.20%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKE------VTKRVDTAASQWKGWNWRSEGDLLLNGAYFTPXXXXXXXXXXXXXXXXXKS-SSMVGSITSGAGALTCRKSRQC 397
            R GY HV NN Y  W MYAIGGSA+PTI S+GN + A  +   K+      VTKR+D +   WK W WR+  D+  NGAYF P                  S  S+V  +TS AG L C   R C
Sbjct:  267 RRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFVASDDPSKKQVSSFKIVTKRID-SGYDWKRWKWRTSKDVFKNGAYFVPSGYGTVTPLYGRAERFPVSHGSLVPLLTSSAGPLHCYSGRIC 390          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: MPA11_AMBAR (Pollen allergen Amb a 1.1 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.802e-17
Identity = 50/119 (42.02%), Postives = 62/119 (52.10%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYF-TPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397
            RHG+F VVNN+Y  W  YAIGGSA+PTI SQGNR+ AP     K V  R   AA++   WNWR+  D+L NGA F                    +      S+TS AG L+C+    C
Sbjct:  278 RHGFFQVVNNNYDKWGSYAIGGSASPTILSQGNRFCAPDERSKKNVLGRHGEAAAESMKWNWRTNKDVLENGAIFVASGVDPVLTPEQSAGMIPAEPGESALSLTSSAGVLSCQPGAPC 396          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: SBP_CRYJA (Sugi basic protein OS=Cryptomeria japonica PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.015e-17
Identity = 45/124 (36.29%), Postives = 67/124 (54.03%), Query Frame = 2
Query:   32 LEKRRHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVD-TAASQWKGWNWRSEGDLLLNGAYF-TPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397
            + + R+G  HV NN+Y  W +YAIGGS+NPTI S+GN + AP  ++ K+VT R+    +S    W W+S  D+  NGAYF +                  ++ +    +T  AG LTC  S++C
Sbjct:  251 MPRARYGLVHVANNNYDPWTIYAIGGSSNPTILSEGNSFTAPNESYKKQVTIRIGCKTSSSCSNWVWQSTQDVFYNGAYFVSSGKYEGGNIYTKKEAFNVENGNATPQLTKNAGVLTCSLSKRC 374          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNAS (Major pollen allergen Jun a 1 OS=Juniperus ashei PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.849e-17
Identity = 42/87 (48.28%), Postives = 56/87 (64.37%), Query Frame = 2
Query:   11 GASAHS*LEKRRHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVD-TAASQWKGWNWRSEGDLLLNGAYF 268
            G +A   + + R+G  HV NN+Y  W +YAIGGS+NPTI S+GN + AP  ++ KEVTKR+   + S    W WRS  D  +NGAYF
Sbjct:  244 GPNAGQRMPRARYGLVHVANNNYDPWNIYAIGGSSNPTILSEGNSFTAPSESYKKEVTKRIGCESPSACANWVWRSTRDAFINGAYF 330          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: MPA13_AMBAR (Pollen allergen Amb a 1.3 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.849e-17
Identity = 48/119 (40.34%), Postives = 59/119 (49.58%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVDTAASQWKGWNWRSEGDLLLNGAYF-TPXXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397
            R G+F VVNN+Y  W  YAIGGS+ PTI  QGNR+ AP +   K V  R  T A++   WNWRS+ DLL NGA F T                  +       +TS AG  +C     C
Sbjct:  279 RFGFFQVVNNNYDRWGTYAIGGSSAPTILCQGNRFLAPDDQIKKNVLARTGTGAAESMAWNWRSDKDLLENGAIFVTSGSDPVLTPVQSAGMIPAEPGEAAIKLTSSAGVFSCHPGAPC 397          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: MPAC1_CUPAR (Major pollen allergen Cup a 1 OS=Cupressus arizonica PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.526e-16
Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = 2
Query:   11 GASAHS*LEKRRHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVD-TAASQWKGWNWRSEGDLLLNGAYF 268
            G +A   + + R+G  HV NN+Y  W +YAIGGS+NPTI S+GN + AP  ++ KEVTKR+     S    W WRS  D   NGAYF
Sbjct:  223 GPNAGQRMPRARYGLVHVANNNYDQWNIYAIGGSSNPTILSEGNSFTAPNESYKKEVTKRIGCETTSACANWVWRSTRDAFTNGAYF 309          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNVI (Major pollen allergen Jun v 1 OS=Juniperus virginiana PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 42/87 (48.28%), Postives = 54/87 (62.07%), Query Frame = 2
Query:   11 GASAHS*LEKRRHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRVD-TAASQWKGWNWRSEGDLLLNGAYF 268
            G +A   + + R+G  HV NN+Y  W +YAIGGS+NPTI S+GN + AP   + KEVTKR+   + S    W WRS  D   NGAYF
Sbjct:  244 GPNAGQRMPRARYGLVHVANNNYDPWNIYAIGGSSNPTILSEGNSFTAPNENYKKEVTKRIGCESTSACANWVWRSTRDAFSNGAYF 330          
BLAST of EY659904 vs. ExPASy Swiss-Prot
Match: MPA14_AMBAR (Pollen allergen Amb a 1.4 OS=Ambrosia artemisiifolia PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.410e-15
Identity = 49/120 (40.83%), Postives = 62/120 (51.67%), Query Frame = 2
Query:   44 RHGYFHVVNNDYTLWPMYAIGGSANPTINSQGNRYNAPLNAFAKEVTKRV-DTAASQWKGWNWRSEGDLLLNGAYFTP-XXXXXXXXXXXXXXXXXKSSSMVGSITSGAGALTCRKSRQC 397
            RHG+  VVNN+Y  W  YA+GGSA PTI SQGNR+ A  +   KEV  R  ++A S+   WNWRS  D+  NGA F P                  +    V  +TS AG L+C+    C
Sbjct:  275 RHGFVQVVNNNYERWGSYALGGSAGPTILSQGNRFLA--SDIKKEVVGRYGESAMSESINWNWRSYMDVFENGAIFVPSGVDPVLTPEQNAGMIPAEPGEAVLRLTSSAGVLSCQPGAPC 392          
The following BLAST results are available for this feature:
BLAST of EY659904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
PEL2_ARATH1.380e-1742.40Putative pectate lyase 2 OS=Arabidopsis thaliana G... [more]
MPA11_AMBAR1.802e-1742.02Pollen allergen Amb a 1.1 OS=Ambrosia artemisiifol... [more]
SBP_CRYJA4.015e-1736.29Sugi basic protein OS=Cryptomeria japonica PE=1 SV... [more]
MPAJ1_JUNAS6.849e-1748.28Major pollen allergen Jun a 1 OS=Juniperus ashei P... [more]
MPA13_AMBAR6.849e-1740.34Pollen allergen Amb a 1.3 OS=Ambrosia artemisiifol... [more]
MPAC1_CUPAR1.526e-1648.28Major pollen allergen Cup a 1 OS=Cupressus arizoni... [more]
MPAJ1_JUNVI4.439e-1648.28Major pollen allergen Jun v 1 OS=Juniperus virgini... [more]
MPA14_AMBAR6.410e-1540.83Pollen allergen Amb a 1.4 OS=Ambrosia artemisiifol... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-D06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659904 ID=EY659904; Name=EY659904; organism=Citrus sinensis; type=EST; length=890bp
TTTCAAAGAAGGCGCGTCCGCTCATTCTTGACTAGAAAAGAGGAGACATG
GTTATTTCCATGTGGTGAACAATGACTACACTCTCTGGCCCATGTATGCC
ATTGGTGGAAGTGCAAACCCCACCATCAACAGCCAGGGAAACAGATACAA
TGCTCCATTGAATGCCTTCGCAAAGGAGGTAACAAAGAGGGTGGACACAG
CTGCAAGCCAGTGGAAGGGCTGGAACTGGAGATCTGAAGGAGACCTCTTG
CTGAACGGTGCCTACTTTACCCCATCCGGAGCAGGAGCCTCAGCTAGCTA
TGCTCGTGCTTCAAGCTTGGGAGCCAAGTCTTCCTCCATGGTTGGATCCA
TTACTTCTGGTGCTGGTGCTCTTACTTGCCGCAAGAGCCGTCAGTGCTCA
TAGTATTCATCATTAAATTGGCCGAAAAAAGAAATGGCCATCGAATTTCT
GTTTTGTTTTTCATTTTTCTTCTATATAGTATATCACCTATCCAATTTAT
CCACAATCTGGTCATTGTTTCAATCTCTACCGTATATCTGCTTCACATAT
TTTGACAAGTGTACATTATTGCACATGTCATTGTATTGCCTCACCCAGTT
TGTTTATCAGTTACTTGCTCAACCTCGGCCTGCTTCAACTGAAAAAACAA
ACATTTGCATTCCCAGAAGCAGGTGCGGAAGTGTTGTTCATTTTATTTTC
CCTCTTTGGCCTCTTTTTTCAGCCTCAATTCTCATTTCCTTCTAACTAGC
ACTTGNCTATTTGTGTCCAGTGTCAGTCAGCTGTCAACTGTCAATCTTGG
TCTCTCTACATACTCTCTTTTTCATTTTTGGCTTTTGGGGTTATAGGGTC
GGAATGATTTTGTGCTTTTTCTCCCGCCTCTTTGTTGTGC
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