EY659896

Overview
NameEY659896
Unique NameEY659896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CAMJJ (GTP cyclohydrolase 1 OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=folE PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.458e-19
Identity = 55/132 (41.67%), Postives = 84/132 (63.64%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            ED VK +L+ +GE+ NREG+ KTP+RV K     T GYTQNVK+I+  ALF  +  +           +V+VRD++ +S C+  LLPF  + HV Y+P+ ++V+GLSK P L++ F    + Q +LT+++ Q
Sbjct:    6 EDCVKTMLEIIGENPNREGLIKTPNRVFKTYEFLTSGYTQNVKEILNDALFESSNNE-----------MVLVRDIEFYSLCEHHLLPFFGRAHVAYIPN-KKVVGLSKIPRLVEVFARRLQIQEQLTEQIAQ 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH11_ANASP (GTP cyclohydrolase 1 1 OS=Anabaena sp. (strain PCC 7120) GN=folE1 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.242e-19
Identity = 54/145 (37.24%), Postives = 89/145 (61.38%), Query Frame = 3
Query:  423 ELGFEQEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            EL    E D  ++  AV+ +L G+GED  REG+ KTP RVA+A+R  T GY Q++++++ GA+F E   +           +V+VRD++ FS C+  +LPF  + HV Y+P+ Q+V+GLSK   +++ +    + Q RLT ++ +
Sbjct:   39 ELHQPSEEDMESMMGAVRSILVGVGEDPEREGLLKTPKRVAEAMRFLTSGYNQSLEELLNGAVFDEGHNE-----------MVLVRDINFFSLCEHHMLPFMGRAHVAYIPN-QKVVGLSKLARIVEMYSRRLQVQERLTRQIAE 171          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_SYNJB (GTP cyclohydrolase 1 OS=Synechococcus sp. GN=folE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.540e-19
Identity = 59/164 (35.98%), Postives = 94/164 (57.32%), Query Frame = 3
Query:  369 DEGHFDLE-LENGVKLSSLELGFEQEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            D+ HF    + +    +  ELG     D  A+  AV+ LL+G+GED  REG++KTP RV  AL+  T GY Q++++++  A+F E   +           +V++RD+ LFS C+  LLPF  K HV Y+P  Q+V+GLSK   +++ +    + Q RLT ++ +
Sbjct:   16 DKAHFKSRVIRDRATFAEEELGSSDVSDP-AMVAAVETLLRGIGEDPQREGLRKTPERVVAALKFLTSGYRQSLEELLNSAIFDEGHDE-----------MVLLRDVSLFSLCEHHLLPFIGKAHVAYIPK-QKVVGLSKIARIVEMYSRRLQVQERLTRQIAE 166          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_GLOVI (GTP cyclohydrolase 1 OS=Gloeobacter violaceus GN=folE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.236e-19
Identity = 53/131 (40.46%), Postives = 83/131 (63.36%), Query Frame = 3
Query:  465 DAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            DAV+ LL G+GED  R G+++TP RVA+AL+  TKGY Q++++++ GA+F                 LV+VRD+DLFS C+  +LPF  + HV Y+P  Q+V+GLSK   +++ +    + Q RLT ++ +
Sbjct:   33 DAVRTLLVGVGEDPERNGLERTPKRVAEALKFLTKGYGQSLEELLNGAIF-----------DLGHDELVLVRDIDLFSMCEHHMLPFIGRAHVGYIPD-QKVVGLSKLARIVEMYARRLQVQERLTRQIAE 151          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CHLTE (GTP cyclohydrolase 1 OS=Chlorobium tepidum GN=folE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.236e-19
Identity = 53/132 (40.15%), Postives = 85/132 (64.39%), Query Frame = 3
Query:  456 AIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            ++ DAV  LL+G+GED  REG+  TP RVAK+LR  TKGY Q+ + +++ A+F E+  +           +V+V+D+D++S C+  +LPF  K HV Y+P G +++GLSK P +++ F    + Q RLT ++
Sbjct:   43 SMTDAVYSLLKGVGEDPEREGLLLTPERVAKSLRFLTKGYRQDPEQLLKKAVFTESYDE-----------MVLVKDIDIYSMCEHHMLPFFGKAHVAYIPDG-KIVGLSKIPRVVEVFARRLQVQERLTQQI 162          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_DICDI (GTP cyclohydrolase 1 OS=Dictyostelium discoideum GN=gchA PE=1 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 9.451e-19
Identity = 60/162 (37.04%), Postives = 93/162 (57.41%), Query Frame = 3
Query:  390 ELENGVKLSSLELGFEQEP-----DAL-AIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            E  NG     ++ G ++EP     + L  ++ +VK LL  LGED +REG+ KTP R++KAL   T+GY Q+V +++  A+F E               +V+VRD+D+FS C+  ++PF  K H+ Y+P  Q+VLGLSK   + + F    + Q RLT ++ Q
Sbjct:   22 ERSNGKGKELVDFGKKREPLIHNHEVLNTMQSSVKTLLSSLGEDPDREGLLKTPLRMSKALLFFTQGYEQSVDEVIGEAIFNE-----------NHHEMVVVRDIDIFSLCEHHMVPFHGKCHIGYIPD-QKVLGLSKLARVAEIFARRLQVQERLTRQIAQ 171          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_SCHPO (GTP cyclohydrolase 1 OS=Schizosaccharomyces pombe GN=SPAC17A5.13 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.234e-18
Identity = 55/140 (39.29%), Postives = 81/140 (57.86%), Query Frame = 3
Query:  438 QEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            +E     I +A+  +L+ LGED  R+G+  TP R AKA+   TKGY QN+ +++  A+F E   +           +VIVRD+D+FS C+  L+PF  K+H+ Y+P  +RVLGLSK   +   F    + Q RLT +V Q
Sbjct:   48 EEEKVKKISNAISTILECLGEDPERQGLLGTPERYAKAMLYFTKGYEQNLTEVINEAVFQEDHEE-----------MVIVRDIDVFSLCEHHLVPFIGKIHIGYIPR-KRVLGLSKLARIANMFSRRLQVQERLTKQVAQ 175          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_NOSP7 (GTP cyclohydrolase 1 OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=folE PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.612e-18
Identity = 50/133 (37.59%), Postives = 85/133 (63.91%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            ++DAV+ ++ G+GED  REG+ KTP RVA+A+R  T GY Q+++++V  A+F E   +           +V+VRD++ FS C+  +LPF  + HV Y+P+ Q+V+GLSK   +++ +    + Q RLT ++ +
Sbjct:   51 MKDAVRKIILGVGEDPEREGLLKTPKRVAEAMRFLTSGYNQSLEELVNDAIFDEGHNE-----------MVLVRDINFFSLCEHHMLPFMGRAHVAYIPN-QKVVGLSKLARIVEMYSRRLQVQERLTRQIAE 171          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_LEPBP (GTP cyclohydrolase 1 OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=folE PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.591e-18
Identity = 49/133 (36.84%), Postives = 82/133 (61.65%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            +E+ ++ +L+ +GED NREG+ KTP+RV KA    T GY  ++  +V GA+F E               +V+VRD++++S C+  LLPF  + HV Y+P+ ++++G+SK P ++  F    + Q RLTD++ Q
Sbjct:    1 MENLIEEILKQIGEDPNREGLVKTPNRVKKAYDFLTSGYKADINQLVNGAIFEE-----------NTTGMVLVRDIEMYSLCEHHLLPFYGRAHVAYIPN-KKIIGISKIPRIVDVFARRLQVQERLTDQIAQ 121          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_LEPBA (GTP cyclohydrolase 1 OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=folE PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.591e-18
Identity = 49/133 (36.84%), Postives = 82/133 (61.65%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            +E+ ++ +L+ +GED NREG+ KTP+RV KA    T GY  ++  +V GA+F E               +V+VRD++++S C+  LLPF  + HV Y+P+ ++++G+SK P ++  F    + Q RLTD++ Q
Sbjct:    1 MENLIEEILKQIGEDPNREGLVKTPNRVKKAYDFLTSGYKADINQLVNGAIFEE-----------NTTGMVLVRDIEMYSLCEHHLLPFYGRAHVAYIPN-KKIIGISKIPRIVDVFARRLQVQERLTDQIAQ 121          
The following BLAST results are available for this feature:
BLAST of EY659896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
GCH1_CAMJJ1.458e-1941.67GTP cyclohydrolase 1 OS=Campylobacter jejuni subsp... [more]
GCH11_ANASP4.242e-1937.24GTP cyclohydrolase 1 1 OS=Anabaena sp. (strain PCC... [more]
GCH1_SYNJB5.540e-1935.98GTP cyclohydrolase 1 OS=Synechococcus sp. GN=folE ... [more]
GCH1_GLOVI7.236e-1940.46GTP cyclohydrolase 1 OS=Gloeobacter violaceus GN=f... [more]
GCH1_CHLTE7.236e-1940.15GTP cyclohydrolase 1 OS=Chlorobium tepidum GN=folE... [more]
GCH1_DICDI9.451e-1937.04GTP cyclohydrolase 1 OS=Dictyostelium discoideum G... [more]
GCH1_SCHPO1.234e-1839.29GTP cyclohydrolase 1 OS=Schizosaccharomyces pombe ... [more]
GCH1_NOSP71.612e-1837.59GTP cyclohydrolase 1 OS=Nostoc punctiforme (strain... [more]
GCH1_LEPBP3.591e-1836.84GTP cyclohydrolase 1 OS=Leptospira biflexa serovar... [more]
GCH1_LEPBA3.591e-1836.84GTP cyclohydrolase 1 OS=Leptospira biflexa serovar... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659896 ID=EY659896; Name=EY659896; organism=Citrus sinensis; type=EST; length=885bp
TCAAACAACGCCGCGTCCGAATAATCATTCCCAAAAAACGTATCCTCTTT
CTTTTCCCTTACCCTCTCCCTCTACTGCTTCTGCTCCCTATCTCTTCACA
TCTCTCTTCTTCTCGCTGTTCTTATTGTCTCTGGCTACCTCTTCTTTTCT
TTTTTCCTCTCTCTCCCCTTTTTTTCTTAATTGACAGTTTTACAAAAAAT
TGATTTTTTATTTTTGTGTGTTCCAGAACCAATCTCTTTTCGAGTTTCCA
ATATCAATATCAATATCAATATCAAAGTTGTTTTGTGTGTACTTTTTTGG
GTTTTTGATTGGTTTGTTTATCTGGGTTGTTGTTATTTTGTGTGTCTCTC
AATCAAATGGGCGCTTTGGATGAGGGACATTTCGATTTGGAGCTTGAGAA
TGGAGTGAAACTGAGTAGCCTTGAGCTTGGCTTTGAGCAAGAACCAGACG
CGCTCGCTATTGAGGATGCCGTCAAAGTTCTCTTGCAAGGATTAGGTGAA
GATATTAATAGAGAAGGCATCAAGAAGACTCCTCATCGCGTTGCCAAAGC
TCTTCGTGAAGGAACCAAAGGTTACACACAAAATGTAAAAGACATTGTTG
AAGGTGCTTTGTTCCCTGAAGCANGTGTGGATCATGGAATTGGTCATGCC
GGAGGAGCAGGTGGGCTTGTGATTGTTCGAGATCTTGACCTCTTCTCATA
CTGCCAGTCTTGTTTGCTTCCTTTTCAGGTTAAAGTTCATGTANGCTATG
TGCCATCTGGTCAACGAGTTTTGGGATTAAGCAAGTCTCCAGAGTTGCTG
AAGTCTTTTCAAACGACTCCAAAACCACAGCGTCTAACAGATGAAGTGTG
TCAGCTTTGCACATGGTATCAGCCGGGCAGTGTTG
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