EY659896

Overview
NameEY659896
Unique NameEY659896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRP2 (GTP cyclohydrolase 1 OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN=folE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 43/135 (31.85%), Postives = 70/135 (51.85%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            D   IE AVK++++ +GED NREG+++TP RVA+  +E   G  Q  ++ +  +                   +V+ +D+   + C+   LPF  + H+ Y+P G RV GLSK    ++ +   P+ Q RL  EV
Sbjct:    2 DTQKIEAAVKMIIEAVGEDANREGLQETPARVARMYQEIFSGLGQTAEEHLSKSF------------EIIDDNMVVEKDIFFHTMCEHHFLPFYGRAHIAYIPDG-RVAGLSKLARTVEVYSKKPQIQERLNIEV 123          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_RHOPB (GTP cyclohydrolase 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=folE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 43/125 (34.40%), Postives = 62/125 (49.60%), Query Frame = 3
Query:  435 EQEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            +  P     E AVK LL  +GED  REG+  TP RV +A  E  +GY Q   +++       A  D            V++RD+   S+C+  ++PF  K H+ Y P  +RV+GLSK   L+  F
Sbjct:   44 QPRPSRGEAEQAVKTLLAYIGEDTAREGLLDTPRRVVEAYDELFQGYHQCPAEVLNRTFGETAGYD----------DFVLIRDMSFTSHCEHHVMPFYGKAHIAYTPV-ERVVGLSKLARLVDIF 157          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_BRAJA (GTP cyclohydrolase 1 OS=Bradyrhizobium japonicum GN=folE PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.256e-11
Identity = 46/140 (32.86%), Postives = 68/140 (48.57%), Query Frame = 3
Query:  390 ELENGVKLSSLELGFEQEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            EL+    L++     +  P     E AVK LL  +GE+  REG+  TP RV +A  E  +GY Q   ++++      A  D            V+VRD++  S C+  ++PF  K H+ Y P  +RV+GLSK   L   F
Sbjct:   24 ELDPAEFLAAAVRADQPRPARAQAEAAVKTLLAYIGENTEREGLLDTPRRVVEAFDELYQGYHQCPAEVLDRTFGETAGYD----------DFVLVRDIEFTSQCEHHMMPFYGKAHIAYTPV-ERVVGLSKLARLTDIF 152          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRZT (GTP cyclohydrolase 1 OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=folE PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11
Identity = 42/135 (31.11%), Postives = 71/135 (52.59%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            D   IE AVK++++ +GE++NREG+++TP RVA+  +E   G  Q  ++ +  +                   +V+ +D+   + C+   LPF  + H+ Y+P G RV GLSK    ++ +   P+ Q RL  EV
Sbjct:    2 DTQKIEAAVKMIIEAVGENVNREGLQETPARVARMYQEIFSGLGQTAEEHLSKSF------------EIIDDNMVVEKDIFFHTMCEHHFLPFYGRAHIAYIPDG-RVAGLSKLARTVEVYSKKPQIQERLNIEV 123          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRSV (GTP cyclohydrolase 1 OS=Streptococcus sanguinis (strain SK36) GN=folE PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11
Identity = 44/137 (32.12%), Postives = 72/137 (52.55%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            D   IE AV  +++ +GED +REG+++TP R+AK  +E   G  +  ++ +  +                   +V+ +D+   S C+   LPF  KVH+ YVP+G RV GLSK    ++ +   P+ Q RLT E+ +
Sbjct:    2 DTKKIEAAVAQIIEAVGEDGSREGLQETPQRIAKMYQEIFAGLGETAEEHLAKSF------------EIIDNNMVVEKDIFFHSMCEHHFLPFYGKVHIAYVPNG-RVAGLSKLARTVEVYAKKPQIQERLTVEIAE 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_DEHSC (GTP cyclohydrolase 1 OS=Dehalococcoides sp. (strain CBDB1) GN=folE PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11
Identity = 40/129 (31.01%), Postives = 69/129 (53.49%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPS-GQRVLGLSKSPELLKSFQTTPKPQ 830
            D  AI+ +V+ +L  +GED +REG+K+TP RVA+   E   G  Q+  +++                      +VI++D+  +S C+  LLPF   VH+ Y+P+   RV+G+SK   +++ +   P+ Q
Sbjct:    3 DEQAIKQSVQNILVAIGEDPDREGLKETPRRVAQMYTELFSGMNQDPAEVLR------------VGYELGHREMVIIKDIPFYSMCEHHLLPFSGVVHIGYIPNIDGRVVGISKLARVVEIYAKRPQIQ 119          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_DEHSB (GTP cyclohydrolase 1 OS=Dehalococcoides sp. (strain BAV1) GN=folE PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.252e-11
Identity = 40/129 (31.01%), Postives = 69/129 (53.49%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPS-GQRVLGLSKSPELLKSFQTTPKPQ 830
            D  AI+ +V+ +L  +GED +REG+K+TP RVA+   E   G  Q+  +++                      +VI++D+  +S C+  LLPF   VH+ Y+P+   RV+G+SK   +++ +   P+ Q
Sbjct:    3 DEQAIKQSVQNILVAIGEDPDREGLKETPRRVAQMYTELFSGMNQDPAEVLR------------VGYELGHREMVIIKDIPFYSMCEHHLLPFSGVVHIGYIPNIDGRVVGISKLARVVEIYAKRPQIQ 119          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_XANCP (GTP cyclohydrolase 1 OS=Xanthomonas campestris pv. campestris GN=folE PE=3 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 42/132 (31.82%), Postives = 71/132 (53.79%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            E+AV+ LL+  GED  REG+  TP RVA+A  +   GY +           P A ++           L+++RD+   S+C+  + P   KVHV Y+P G +V+G+SK   +++S+    + Q ++T ++ Q
Sbjct:   17 EEAVRTLLRWAGEDPAREGLLDTPRRVAEAYGDWFSGYREE----------PRAYLERTFEEVAGYDELIVLRDISYESHCEHHMAPIIGKVHVGYLPRG-KVVGISKLARVVESYARRFQVQEKMTAQIAQ 137          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRPZ (GTP cyclohydrolase 1 OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=folE PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            E A+   L+ +GE+ NREG+  TP RVAK   E   G  ++ K+    A+F E   D           +VIV+ +  +S C+  L+PF  K H+ Y+PS  RV GLSK    ++     P+ Q RLT ++
Sbjct:   15 EAAIYQFLEAIGENPNREGLLDTPKRVAKMYAEMFLGLGKDPKEEFT-AVFKEQHED-----------VVIVKGISFYSICEHHLVPFYGKAHIAYLPSDGRVTGLSKLARAVEVASKRPQLQERLTSQI 132          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRPY (GTP cyclohydrolase 1 OS=Streptococcus pyogenes GN=folE PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 46/130 (35.38%), Postives = 68/130 (52.31%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            E A+   L+ +GE+ NREG+  TP RVAK   E   G  ++ K+    A+F E   D           +VIV+D+  +S C+   +PF  K H+ Y+PS  RV GLSK    ++     P+ Q RLT ++
Sbjct:   15 EAAIYQFLEAIGENPNREGLLDTPKRVAKMYAEMFAGLKKDPKEEFT-AVFTEHHED-----------VVIVKDISFYSMCEHHQVPFYGKAHIAYLPSDGRVTGLSKLARAVEVASKRPQLQERLTAQI 132          
The following BLAST results are available for this feature:
BLAST of EY659896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
GCH1_STRP23.256e-1131.85GTP cyclohydrolase 1 OS=Streptococcus pneumoniae s... [more]
GCH1_RHOPB3.256e-1134.40GTP cyclohydrolase 1 OS=Rhodopseudomonas palustris... [more]
GCH1_BRAJA3.256e-1132.86GTP cyclohydrolase 1 OS=Bradyrhizobium japonicum G... [more]
GCH1_STRZT4.252e-1131.11GTP cyclohydrolase 1 OS=Streptococcus pneumoniae (... [more]
GCH1_STRSV4.252e-1132.12GTP cyclohydrolase 1 OS=Streptococcus sanguinis (s... [more]
GCH1_DEHSC4.252e-1131.01GTP cyclohydrolase 1 OS=Dehalococcoides sp. (strai... [more]
GCH1_DEHSB4.252e-1131.01GTP cyclohydrolase 1 OS=Dehalococcoides sp. (strai... [more]
GCH1_XANCP5.553e-1131.82GTP cyclohydrolase 1 OS=Xanthomonas campestris pv.... [more]
GCH1_STRPZ5.553e-1135.38GTP cyclohydrolase 1 OS=Streptococcus pyogenes ser... [more]
GCH1_STRPY5.553e-1135.38GTP cyclohydrolase 1 OS=Streptococcus pyogenes GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659896 ID=EY659896; Name=EY659896; organism=Citrus sinensis; type=EST; length=885bp
TCAAACAACGCCGCGTCCGAATAATCATTCCCAAAAAACGTATCCTCTTT
CTTTTCCCTTACCCTCTCCCTCTACTGCTTCTGCTCCCTATCTCTTCACA
TCTCTCTTCTTCTCGCTGTTCTTATTGTCTCTGGCTACCTCTTCTTTTCT
TTTTTCCTCTCTCTCCCCTTTTTTTCTTAATTGACAGTTTTACAAAAAAT
TGATTTTTTATTTTTGTGTGTTCCAGAACCAATCTCTTTTCGAGTTTCCA
ATATCAATATCAATATCAATATCAAAGTTGTTTTGTGTGTACTTTTTTGG
GTTTTTGATTGGTTTGTTTATCTGGGTTGTTGTTATTTTGTGTGTCTCTC
AATCAAATGGGCGCTTTGGATGAGGGACATTTCGATTTGGAGCTTGAGAA
TGGAGTGAAACTGAGTAGCCTTGAGCTTGGCTTTGAGCAAGAACCAGACG
CGCTCGCTATTGAGGATGCCGTCAAAGTTCTCTTGCAAGGATTAGGTGAA
GATATTAATAGAGAAGGCATCAAGAAGACTCCTCATCGCGTTGCCAAAGC
TCTTCGTGAAGGAACCAAAGGTTACACACAAAATGTAAAAGACATTGTTG
AAGGTGCTTTGTTCCCTGAAGCANGTGTGGATCATGGAATTGGTCATGCC
GGAGGAGCAGGTGGGCTTGTGATTGTTCGAGATCTTGACCTCTTCTCATA
CTGCCAGTCTTGTTTGCTTCCTTTTCAGGTTAAAGTTCATGTANGCTATG
TGCCATCTGGTCAACGAGTTTTGGGATTAAGCAAGTCTCCAGAGTTGCTG
AAGTCTTTTCAAACGACTCCAAAACCACAGCGTCTAACAGATGAAGTGTG
TCAGCTTTGCACATGGTATCAGCCGGGCAGTGTTG
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