EY659896

Overview
NameEY659896
Unique NameEY659896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH11_PSEAE (GTP cyclohydrolase 1 1 OS=Pseudomonas aeruginosa GN=folE1 PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.971e-16
Identity = 50/118 (42.37%), Postives = 69/118 (58.47%), Query Frame = 3
Query:  456 AIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            A+    + +L GLGED  REG+  TP R AKA++    GY Q +++IV GALF                 +VIVRD++L+S C+  LLPF  K HV Y+P+G +VLGLSK   ++  F
Sbjct:    4 ALSQHYREILVGLGEDPQREGLLDTPKRAAKAMQYLCHGYGQTLEEIVNGALFAS-----------DNDEMVIVRDIELYSLCEHHLLPFIGKAHVAYIPTG-KVLGLSKVARIVDMF 109          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CHRSD (GTP cyclohydrolase 1 OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=folE PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.390e-16
Identity = 46/117 (39.32%), Postives = 74/117 (63.25%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            + D  + ++ GLGED +REG++ TP R AKA++  T+GY Q ++ +V GA+F E+  D           +V+++D++L+S C+  LLPF  K H+ Y+P G RVLGLSK   ++  +
Sbjct:    5 LADNYRHIIAGLGEDPDREGLRDTPKRAAKAMQFLTQGYGQTLESLVNGAVF-ESQTD----------EMVLIKDIELYSMCEHHLLPFIGKCHIAYLPEG-RVLGLSKFARIVDMY 109          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CAMC5 (GTP cyclohydrolase 1 OS=Campylobacter curvus (strain 525.92) GN=folE PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.390e-16
Identity = 47/134 (35.07%), Postives = 84/134 (62.69%), Query Frame = 3
Query:  456 AIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            + E++VK +L+ +GED NREG+ KTP RV KA +  T GY ++ K+++  ALF  +  +           +V++R+++ +S C+  LLP   +VHV Y+P+G +V+GLSK P ++  +    + Q ++T+++ Q
Sbjct:    4 SFENSVKNILKIIGEDPNREGLLKTPSRVYKAFKFLTSGYEEDPKEVLNDALFTSSNNE-----------MVLMRNIEFYSLCEHHLLPIIGRVHVAYIPNG-KVVGLSKIPRMVNIYARRLQIQEQMTEQIAQ 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_COXBU (GTP cyclohydrolase 1 OS=Coxiella burnetii GN=folE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.733e-16
Identity = 50/133 (37.59%), Postives = 80/133 (60.15%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            I D VK +L  LGED NREG++ TP R  KAL   TKGY + +  +V+ A+F ++ +D           +VI++D++L+S C+  LLPF  + HV Y+PSG +++G+SK   ++  F    + Q  LT ++ +
Sbjct:    5 IADHVKAILIALGEDPNREGLRDTPKRYEKALEHLTKGYHEKLPSVVKKAVF-QSGMD----------EMVILKDIELYSLCEHHLLPFIGRCHVAYLPSG-KIIGISKLARIVDMFAKRLQVQENLTKQIAE 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_COXBR (GTP cyclohydrolase 1 OS=Coxiella burnetii (strain RSA 331 / Henzerling II) GN=folE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.733e-16
Identity = 50/133 (37.59%), Postives = 80/133 (60.15%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            I D VK +L  LGED NREG++ TP R  KAL   TKGY + +  +V+ A+F ++ +D           +VI++D++L+S C+  LLPF  + HV Y+PSG +++G+SK   ++  F    + Q  LT ++ +
Sbjct:    5 IADHVKAILIALGEDPNREGLRDTPKRYEKALEHLTKGYHEKLPSVVKKAVF-QSGMD----------EMVILKDIELYSLCEHHLLPFIGRCHVAYLPSG-KIIGISKLARIVDMFAKRLQVQENLTKQIAE 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_COXBN (GTP cyclohydrolase 1 OS=Coxiella burnetii (strain Dugway 5J108-111) GN=folE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.733e-16
Identity = 50/133 (37.59%), Postives = 80/133 (60.15%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            I D VK +L  LGED NREG++ TP R  KAL   TKGY + +  +V+ A+F ++ +D           +VI++D++L+S C+  LLPF  + HV Y+PSG +++G+SK   ++  F    + Q  LT ++ +
Sbjct:    5 IADHVKAILIALGEDPNREGLRDTPKRYEKALEHLTKGYHEKLPSVVKKAVF-QSGMD----------EMVILKDIELYSLCEHHLLPFIGRCHVAYLPSG-KIIGISKLARIVDMFAKRLQVQENLTKQIAE 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_AGRT5 (GTP cyclohydrolase 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=folE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.733e-16
Identity = 52/125 (41.60%), Postives = 72/125 (57.60%), Query Frame = 3
Query:  435 EQEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            E  P     E+AV+VLL+  GE+  REG+  TP RVAKA RE   GY  NV+D++ G  F E               +V+VRD+  FS+C+  ++P   K HV Y+P+G RVLGLSK   +++ F
Sbjct:   19 EARPSQAEAEEAVRVLLRWAGENPAREGLLDTPKRVAKAYRELFAGYELNVQDVL-GTTFEEV---------GGYDDVVLVRDIPFFSHCEHHMVPIVGKAHVAYLPAG-RVLGLSKIARVVEIF 132          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_RAT (GTP cyclohydrolase 1 OS=Rattus norvegicus GN=Gch1 PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.488e-16
Identity = 49/133 (36.84%), Postives = 77/133 (57.89%), Query Frame = 3
Query:  468 AVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQLCT 863
            A   +L+ LGED  R+G+ KTP R A A++  TKGY + + D++  A+F E               +VIV+D+D+FS C+  L+PF  +VH+ Y+P+ Q VLGLSK   +++ +    + Q RLT ++    T
Sbjct:   65 AYSSILRSLGEDPQRQGLLKTPWRAATAMQFFTKGYQETISDVLNDAIFDE-----------DHDEMVIVKDIDMFSMCEHHLVPFVGRVHIGYLPNKQ-VLGLSKLARIVEIYSRRLQVQERLTKQIAVAIT 185          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_LEPIN (GTP cyclohydrolase 1 OS=Leptospira interrogans GN=folE PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.780e-16
Identity = 48/131 (36.64%), Postives = 77/131 (58.78%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            +E+ V  +L+ +GED  REG+  TP RV KA    T GY  ++  IV GA+F E               +V+VRD++++S C+  LLPF  K HV Y+P+ ++++G+SK P ++  F    + Q RLT+++
Sbjct:    1 MEEDVINILKSIGEDPTREGLLNTPKRVKKAYEFLTSGYRADITKIVNGAIFEE-----------PTEGMVLVRDIEMYSLCEHHLLPFYGKAHVAYLPN-KKIIGISKIPRIVDVFARRLQVQERLTEQI 119          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_LEPIC (GTP cyclohydrolase 1 OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=folE PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.780e-16
Identity = 48/131 (36.64%), Postives = 77/131 (58.78%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            +E+ V  +L+ +GED  REG+  TP RV KA    T GY  ++  IV GA+F E               +V+VRD++++S C+  LLPF  K HV Y+P+ ++++G+SK P ++  F    + Q RLT+++
Sbjct:    1 MEEDVINILKSIGEDPTREGLLNTPKRVKKAYEFLTSGYRADITKIVNGAIFEE-----------PTEGMVLVRDIEMYSLCEHHLLPFYGKAHVAYLPN-KKIIGISKIPRIVDVFARRLQVQERLTEQI 119          
The following BLAST results are available for this feature:
BLAST of EY659896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
GCH11_PSEAE1.971e-1642.37GTP cyclohydrolase 1 1 OS=Pseudomonas aeruginosa G... [more]
GCH1_CHRSD4.390e-1639.32GTP cyclohydrolase 1 OS=Chromohalobacter salexigen... [more]
GCH1_CAMC54.390e-1635.07GTP cyclohydrolase 1 OS=Campylobacter curvus (stra... [more]
GCH1_COXBU5.733e-1637.59GTP cyclohydrolase 1 OS=Coxiella burnetii GN=folE ... [more]
GCH1_COXBR5.733e-1637.59GTP cyclohydrolase 1 OS=Coxiella burnetii (strain ... [more]
GCH1_COXBN5.733e-1637.59GTP cyclohydrolase 1 OS=Coxiella burnetii (strain ... [more]
GCH1_AGRT55.733e-1641.60GTP cyclohydrolase 1 OS=Agrobacterium tumefaciens ... [more]
GCH1_RAT7.488e-1636.84GTP cyclohydrolase 1 OS=Rattus norvegicus GN=Gch1 ... [more]
GCH1_LEPIN9.780e-1636.64GTP cyclohydrolase 1 OS=Leptospira interrogans GN=... [more]
GCH1_LEPIC9.780e-1636.64GTP cyclohydrolase 1 OS=Leptospira interrogans ser... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659896 ID=EY659896; Name=EY659896; organism=Citrus sinensis; type=EST; length=885bp
TCAAACAACGCCGCGTCCGAATAATCATTCCCAAAAAACGTATCCTCTTT
CTTTTCCCTTACCCTCTCCCTCTACTGCTTCTGCTCCCTATCTCTTCACA
TCTCTCTTCTTCTCGCTGTTCTTATTGTCTCTGGCTACCTCTTCTTTTCT
TTTTTCCTCTCTCTCCCCTTTTTTTCTTAATTGACAGTTTTACAAAAAAT
TGATTTTTTATTTTTGTGTGTTCCAGAACCAATCTCTTTTCGAGTTTCCA
ATATCAATATCAATATCAATATCAAAGTTGTTTTGTGTGTACTTTTTTGG
GTTTTTGATTGGTTTGTTTATCTGGGTTGTTGTTATTTTGTGTGTCTCTC
AATCAAATGGGCGCTTTGGATGAGGGACATTTCGATTTGGAGCTTGAGAA
TGGAGTGAAACTGAGTAGCCTTGAGCTTGGCTTTGAGCAAGAACCAGACG
CGCTCGCTATTGAGGATGCCGTCAAAGTTCTCTTGCAAGGATTAGGTGAA
GATATTAATAGAGAAGGCATCAAGAAGACTCCTCATCGCGTTGCCAAAGC
TCTTCGTGAAGGAACCAAAGGTTACACACAAAATGTAAAAGACATTGTTG
AAGGTGCTTTGTTCCCTGAAGCANGTGTGGATCATGGAATTGGTCATGCC
GGAGGAGCAGGTGGGCTTGTGATTGTTCGAGATCTTGACCTCTTCTCATA
CTGCCAGTCTTGTTTGCTTCCTTTTCAGGTTAAAGTTCATGTANGCTATG
TGCCATCTGGTCAACGAGTTTTGGGATTAAGCAAGTCTCCAGAGTTGCTG
AAGTCTTTTCAAACGACTCCAAAACCACAGCGTCTAACAGATGAAGTGTG
TCAGCTTTGCACATGGTATCAGCCGGGCAGTGTTG
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