EY659896

Overview
NameEY659896
Unique NameEY659896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_TERTT (GTP cyclohydrolase 1 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=folE PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.277e-15
Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = 3
Query:  480 LLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            L+   GED+ R G++ TP R A A    T GY Q+V+++V  ALFP    D           +V+VRD++LFS C+  +LPF  K HV Y+P+G +VLGLSK   ++  +
Sbjct:   12 LISSTGEDLQRPGLQGTPARAATAFEYLTSGYKQSVQEVVNDALFPSDSND-----------MVVVRDIELFSLCEHHMLPFIGKAHVGYIPTG-KVLGLSKVARIIDMY 109          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_MOUSE (GTP cyclohydrolase 1 OS=Mus musculus GN=Gch1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.277e-15
Identity = 49/133 (36.84%), Postives = 76/133 (57.14%), Query Frame = 3
Query:  468 AVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQLCT 863
            A   +L  LGED  R+G+ KTP R A A++  TKGY + + D++  A+F E               +VIV+D+D+FS C+  L+PF  +VH+ Y+P+ Q VLGLSK   +++ +    + Q RLT ++    T
Sbjct:   65 AYSSILLSLGEDPQRQGLLKTPWRAATAMQYFTKGYQETISDVLNDAIFDE-----------DHDEMVIVKDIDMFSMCEHHLVPFVGRVHIGYLPNKQ-VLGLSKLARIVEIYSRRLQVQERLTKQIAVAIT 185          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_LYSSC (GTP cyclohydrolase 1 OS=Lysinibacillus sphaericus (strain C3-41) GN=folE PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.277e-15
Identity = 51/135 (37.78%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            D L IE+AVK++L+ +GED+NREG+  TP RVAK   E   G  ++ KD     +F E   +           LV+V+D+  +S C+  L+PF  K HV Y+P+   V GLSK    +++    P+ Q R+T  V
Sbjct:    5 DLLKIEEAVKMILEAVGEDVNREGLLDTPKRVAKMYAEMFSGLHEDAKDYFR-TVFHEDHEE-----------LVLVKDIPFYSMCEHHLVPFYGKAHVAYIPNDGIVAGLSKLGRAVETIARRPQLQERITSSV 127          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_HUMAN (GTP cyclohydrolase 1 OS=Homo sapiens GN=GCH1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.277e-15
Identity = 49/133 (36.84%), Postives = 76/133 (57.14%), Query Frame = 3
Query:  468 AVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQLCT 863
            A   +L  LGE+  R+G+ KTP R A A++  TKGY + + D++  A+F E               +VIV+D+D+FS C+  L+PF  KVH+ Y+P+ Q VLGLSK   +++ +    + Q RLT ++    T
Sbjct:   74 AYSSILSSLGENPQRQGLLKTPWRAASAMQFFTKGYQETISDVLNDAIFDE-----------DHDEMVIVKDIDMFSMCEHHLVPFVGKVHIGYLPNKQ-VLGLSKLARIVEIYSRRLQVQERLTKQIAVAIT 194          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_AZOVD (GTP cyclohydrolase 1 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=folE PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.277e-15
Identity = 44/119 (36.97%), Postives = 73/119 (61.34%), Query Frame = 3
Query:  453 LAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            +++E     +L  LGED++REG+  TP R AKA++   +GY Q ++++V GALF     +           +V+V++++L+S C+  +LPF  K HV Y+P+G +VLGLSK   ++  F
Sbjct:    1 MSLEQQYTAILAQLGEDVSREGLVDTPKRAAKAMQYLCRGYQQTLEEVVNGALFSSDNSE-----------MVMVKNIELYSLCEHHMLPFIGKAHVAYLPNG-KVLGLSKVARIVDMF 107          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH12_PSESM (GTP cyclohydrolase 1 2 OS=Pseudomonas syringae pv. tomato GN=folE2 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.277e-15
Identity = 44/119 (36.97%), Postives = 71/119 (59.66%), Query Frame = 3
Query:  453 LAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            + +E     +L  LGED++REG+  TP R AKA++   +GY Q ++++  GALF     +           +V+V+D++L+S C+  LLPF  K HV Y+P+G +VLGLSK   ++  +
Sbjct:    1 MTLEQNYTAILGQLGEDVSREGLLDTPKRAAKAMQYLCRGYAQTLEEVTNGALFSSDASE-----------MVMVKDIELYSLCEHHLLPFIGKAHVAYIPNG-KVLGLSKVARIVDMY 107          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CHICK (GTP cyclohydrolase 1 OS=Gallus gallus GN=GCH1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.668e-15
Identity = 48/128 (37.50%), Postives = 76/128 (59.38%), Query Frame = 3
Query:  468 AVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            A   +L+ LGED  R+G+ KTP R A A++  TKGY + + D++  A+F E               +VIV+++D+FS C+  L+PF  KVH+ Y+P+ Q VLGLSK   +++ +    + Q RLT ++
Sbjct:   60 AYTTILRALGEDPERQGLLKTPWRAATAMQFFTKGYQETIADVLNDAIFDE-----------DHDEMVIVKNIDMFSLCEHHLVPFVGKVHIGYLPNKQ-VLGLSKLARIVEIYSRRLQVQERLTKQI 175          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CAMLR (GTP cyclohydrolase 1 OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=folE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.668e-15
Identity = 50/132 (37.88%), Postives = 79/132 (59.85%), Query Frame = 3
Query:  462 EDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            E +VK +L+ +GE+  REG+ KTP RV KA      GY Q+ K I+  ALF  +  +           +V+VRD++ +S C+  LLPF  +VHV Y+P  ++V+GLSK P L++ F    + Q +LT+++ +
Sbjct:    6 EQSVKNMLEIIGENPQREGLLKTPTRVFKAFEFLNSGYKQDPKQILNDALFESSNNE-----------MVLVRDIEFYSLCEHHLLPFFGRVHVAYIPD-KKVVGLSKIPRLVEVFARRLQIQEQLTEQIAE 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CAMC1 (GTP cyclohydrolase 1 OS=Campylobacter concisus (strain 13826) GN=folE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.668e-15
Identity = 47/134 (35.07%), Postives = 83/134 (61.94%), Query Frame = 3
Query:  456 AIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            + E++VK +L  +GED NREG+ KTP RV KA +  T GY Q+ K+++  ALF  +  +           +V++R+++ +S C+  LLP   +VHV Y+P+G +V+GLSK P ++  +    + Q ++T+++ +
Sbjct:    4 SFENSVKNMLTIIGEDPNREGLIKTPERVYKAFKFLTSGYEQDPKEVLGDALFTSSNNE-----------MVLMRNIEFYSLCEHHLLPIIGRVHVAYIPNG-KVVGLSKIPRMVNIYARRLQIQEQMTEQIAK 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_PORGI (GTP cyclohydrolase 1 OS=Porphyromonas gingivalis GN=folE PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.845e-15
Identity = 52/139 (37.41%), Postives = 78/139 (56.12%), Query Frame = 3
Query:  435 EQEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            E+E     ++     +L  LGED  REG+ KTP RVAKA++  TKGY ++ + I+  A+F E               +VIV+D+D FS C+  +LPF  K HV Y+P+ + + GLSK P ++  F    + Q RLT ++
Sbjct:    5 EKEEACSRLQQHYAQVLSLLGEDPKREGLLKTPLRVAKAMQFLTKGYNEDPEAILRAAMFEE-----------DYQQMVIVKDIDFFSMCEHHMLPFFGKAHVGYIPN-RYITGLSKLPRVVDVFARRLQVQERLTTQI 131          
The following BLAST results are available for this feature:
BLAST of EY659896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
GCH1_TERTT1.277e-1540.91GTP cyclohydrolase 1 OS=Teredinibacter turnerae (s... [more]
GCH1_MOUSE1.277e-1536.84GTP cyclohydrolase 1 OS=Mus musculus GN=Gch1 PE=2 ... [more]
GCH1_LYSSC1.277e-1537.78GTP cyclohydrolase 1 OS=Lysinibacillus sphaericus ... [more]
GCH1_HUMAN1.277e-1536.84GTP cyclohydrolase 1 OS=Homo sapiens GN=GCH1 PE=1 ... [more]
GCH1_AZOVD1.277e-1536.97GTP cyclohydrolase 1 OS=Azotobacter vinelandii (st... [more]
GCH12_PSESM1.277e-1536.97GTP cyclohydrolase 1 2 OS=Pseudomonas syringae pv.... [more]
GCH1_CHICK1.668e-1537.50GTP cyclohydrolase 1 OS=Gallus gallus GN=GCH1 PE=2... [more]
GCH1_CAMLR1.668e-1537.88GTP cyclohydrolase 1 OS=Campylobacter lari (strain... [more]
GCH1_CAMC11.668e-1535.07GTP cyclohydrolase 1 OS=Campylobacter concisus (st... [more]
GCH1_PORGI2.845e-1537.41GTP cyclohydrolase 1 OS=Porphyromonas gingivalis G... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659896 ID=EY659896; Name=EY659896; organism=Citrus sinensis; type=EST; length=885bp
TCAAACAACGCCGCGTCCGAATAATCATTCCCAAAAAACGTATCCTCTTT
CTTTTCCCTTACCCTCTCCCTCTACTGCTTCTGCTCCCTATCTCTTCACA
TCTCTCTTCTTCTCGCTGTTCTTATTGTCTCTGGCTACCTCTTCTTTTCT
TTTTTCCTCTCTCTCCCCTTTTTTTCTTAATTGACAGTTTTACAAAAAAT
TGATTTTTTATTTTTGTGTGTTCCAGAACCAATCTCTTTTCGAGTTTCCA
ATATCAATATCAATATCAATATCAAAGTTGTTTTGTGTGTACTTTTTTGG
GTTTTTGATTGGTTTGTTTATCTGGGTTGTTGTTATTTTGTGTGTCTCTC
AATCAAATGGGCGCTTTGGATGAGGGACATTTCGATTTGGAGCTTGAGAA
TGGAGTGAAACTGAGTAGCCTTGAGCTTGGCTTTGAGCAAGAACCAGACG
CGCTCGCTATTGAGGATGCCGTCAAAGTTCTCTTGCAAGGATTAGGTGAA
GATATTAATAGAGAAGGCATCAAGAAGACTCCTCATCGCGTTGCCAAAGC
TCTTCGTGAAGGAACCAAAGGTTACACACAAAATGTAAAAGACATTGTTG
AAGGTGCTTTGTTCCCTGAAGCANGTGTGGATCATGGAATTGGTCATGCC
GGAGGAGCAGGTGGGCTTGTGATTGTTCGAGATCTTGACCTCTTCTCATA
CTGCCAGTCTTGTTTGCTTCCTTTTCAGGTTAAAGTTCATGTANGCTATG
TGCCATCTGGTCAACGAGTTTTGGGATTAAGCAAGTCTCCAGAGTTGCTG
AAGTCTTTTCAAACGACTCCAAAACCACAGCGTCTAACAGATGAAGTGTG
TCAGCTTTGCACATGGTATCAGCCGGGCAGTGTTG
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