EY659896

Overview
NameEY659896
Unique NameEY659896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_BIFLO (GTP cyclohydrolase 1 OS=Bifidobacterium longum GN=folE PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.081e-14
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQLCTWY 869
            D   + +AV++ L+ +GED  REG+ +TP R+A+A RE   G   +  D +E        VD           LV+V+D++L+S C+  LLPF    HV Y+P+   V+GLSK   L++ +   P+ Q RLT ++      Y
Sbjct:   16 DEEGVREAVRLFLKSIGEDPEREGLVETPDRIARACRELFTGLQASPADALE----KHFDVDTDE--------LVLVKDIELYSVCEHHLLPFHGVAHVGYIPAKDGVMGLSKLARLVEVYARRPQVQERLTQQIADALVEY 145          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_AGRVS (GTP cyclohydrolase 1 OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=folE PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.081e-14
Identity = 56/149 (37.58%), Postives = 80/149 (53.69%), Query Frame = 3
Query:  444 PDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQR-LTDEVC-QLCTWYQPGSV 884
            P     E+AV+ LL+  G+D +REG+  TP RVAKA  E   GY  NV+D++ G  F E               +V+VRD+  FS+C+  +LP   K HV Y+P+G RVLGLSK   ++  F    + Q  +T ++   L  + QP  V
Sbjct:   15 PSREEAENAVRTLLRWAGDDPSREGLLDTPKRVAKAYGELFGGYNVNVEDVL-GTTFEEV---------GGYNDIVLVRDIPFFSHCEHHMLPVIGKAHVAYLPNG-RVLGLSKIARVVDLFARRLQTQETMTAQIADSLVQYLQPRGV 152          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_ONCMY (GTP cyclohydrolase 1 (Fragment) OS=Oncorhynchus mykiss GN=gch1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.412e-14
Identity = 47/144 (32.64%), Postives = 81/144 (56.25%), Query Frame = 3
Query:  435 EQEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQLCT 863
            + E    ++  A   +++GLG+D  R+G+ KTP R A A++  TKGY + + D++  A+  E               +VIV+D+D+FS C+  L+P   +VH+ Y+P+ +RVLGLSK   +++ +    + Q RLT ++    T
Sbjct:   71 DNEMSLPSLAAAYTTIIRGLGKDPQRQGLLKTPWRAATAMQFFTKGYQEKIIDVLNDAILDE-----------DHDEMVIVKDIDMFSMCEHHLVPIFGRVHIGYLPN-KRVLGLSKLARIVEIYSRRLQVQERLTKQIAVAIT 202          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_HYDS0 (GTP cyclohydrolase 1 OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=folE PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.412e-14
Identity = 48/138 (34.78%), Postives = 77/138 (55.80%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQL 857
            D   I + +K+ L+G+GEDI REGIK+TP RVAK   E  K  + + K   E + + E               ++IV+D+  +S C+  LLPF  K H+ Y+P+ +++ GLSK    +++    P+ Q RLT+E+  +
Sbjct:    3 DKEKIIEGIKLFLEGIGEDITREGIKETPERVAKMWEEFEKERSFDFKLFEEYSNYSE---------------MIIVKDIPFYSMCEHHLLPFFGKAHIAYIPN-KKICGLSKLVRTVRAMALKPQVQERLTEEIADI 124          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_THEYD (GTP cyclohydrolase 1 OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=folE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.844e-14
Identity = 47/141 (33.33%), Postives = 76/141 (53.90%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDI---VEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQL 857
            D   IE+ V+++L+G+GED+ R GIK TP R+A+   E  +G     +D+   +EG    E               +V+++D+  +S C+  LLPF    H+ Y+P G R++GLS+ P+ L      P+ Q RLT ++  L
Sbjct:    3 DRKKIEEGVRLILEGIGEDVERPGIKDTPIRIARMFEEIFRGLLPPDEDLLKSIEGETHDE---------------MVLIKDIPFYSVCEHHLLPFFGNAHIAYIPDG-RIVGLSELPKALDYLSKRPQVQERLTSQLANL 127          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_PSEHT (GTP cyclohydrolase 1 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=folE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.844e-14
Identity = 42/110 (38.18%), Postives = 66/110 (60.00%), Query Frame = 3
Query:  480 LLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            ++  +GED NREG+  TP R AKA+   T+GY Q +++I   A+F     D           +V+V+D++L+S C+  LLPF  + H+ Y+P+G +VLGLSK   ++  F
Sbjct:   12 IITAVGEDPNREGLLDTPKRAAKAMEYLTQGYRQTLEEITNNAVFTSDADD-----------MVLVQDIELYSMCEHHLLPFTGRCHIAYIPNG-KVLGLSKFARIVDMF 109          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_ENTFA (GTP cyclohydrolase 1 OS=Enterococcus faecalis GN=folE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.409e-14
Identity = 51/132 (38.64%), Postives = 66/132 (50.00%), Query Frame = 3
Query:  435 EQEPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ 830
            EQE  A  IE AV  +L+ +GED  R G+  TP RVAK   E   G T+   D            D           +V+V+D+  +S C+  LLPF  KVHV Y+P G +VLGLSK P L++     P  Q
Sbjct:    2 EQEKQA-QIEQAVTTILEAVGEDTQRAGLIDTPKRVAKMYAEVFSGLTEPEFD------------DYKLFDSLNEGEMVLVKDIAFYSMCEHHLLPFYGKVHVAYLPEGGKVLGLSKLPRLVEHCAKRPTVQ 120          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH11_PSESM (GTP cyclohydrolase 1 1 OS=Pseudomonas syringae pv. tomato GN=folE1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.409e-14
Identity = 46/110 (41.82%), Postives = 66/110 (60.00%), Query Frame = 3
Query:  480 LLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            +L  LGE+  REG+  TP R +KA++    GYTQ V++IV GALF                 +VIV++++L+S C+  LLPF  K HV Y+P+G +VLGLSK   ++  F
Sbjct:   12 ILLELGENPEREGLLDTPKRASKAMQYLCHGYTQTVEEIVNGALFAS-----------DNDEMVIVQNIELYSLCEHHLLPFIGKAHVAYIPTG-KVLGLSKIARIVDMF 109          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_PELTS (GTP cyclohydrolase 1 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=folE PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.146e-14
Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            D   IE AV+++L+ +GE+  REG+K TP RVA+   E   G  ++ ++ ++  +F E   +           +VIV+D+ L+S C+  LLPF  K HV Y+P   +V GLSK   +++ F   P+ Q RLT ++
Sbjct:    3 DQHKIEKAVRLILEAIGENPEREGLKGTPARVARMYEEIFSGLQEDPEEHLQ-KIFSEEHEE-----------MVIVKDIPLYSICEHHLLPFYGKAHVAYIPRKGKVTGLSKLARVVEGFAKRPQLQERLTSQI 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_THETN (GTP cyclohydrolase 1 OS=Thermoanaerobacter tengcongensis GN=folE PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.109e-14
Identity = 48/135 (35.56%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            D   I+ AV+ +L+ +GED +REG+ +TP RVA+   E   G   +VKD+++  +F E               +++V+D+ L+S C+  LLPF    HV Y+P   R+LGLSK   ++      P+ Q RLT E+
Sbjct:    3 DKEKIKKAVREILEAIGEDPDREGLLETPDRVARMYEEIFSGLHTDVKDVIK--IFQE----------DEHQEIILVKDIPLYSMCEHHLLPFIGVAHVAYLPRKGRILGLSKVARIVDVLSKRPQLQERLTSEI 125          
The following BLAST results are available for this feature:
BLAST of EY659896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
GCH1_BIFLO1.081e-1434.51GTP cyclohydrolase 1 OS=Bifidobacterium longum GN=... [more]
GCH1_AGRVS1.081e-1437.58GTP cyclohydrolase 1 OS=Agrobacterium vitis (strai... [more]
GCH1_ONCMY1.412e-1432.64GTP cyclohydrolase 1 (Fragment) OS=Oncorhynchus my... [more]
GCH1_HYDS01.412e-1434.78GTP cyclohydrolase 1 OS=Hydrogenobaculum sp. (stra... [more]
GCH1_THEYD1.844e-1433.33GTP cyclohydrolase 1 OS=Thermodesulfovibrio yellow... [more]
GCH1_PSEHT1.844e-1438.18GTP cyclohydrolase 1 OS=Pseudoalteromonas haloplan... [more]
GCH1_ENTFA2.409e-1438.64GTP cyclohydrolase 1 OS=Enterococcus faecalis GN=f... [more]
GCH11_PSESM2.409e-1441.82GTP cyclohydrolase 1 1 OS=Pseudomonas syringae pv.... [more]
GCH1_PELTS3.146e-1435.56GTP cyclohydrolase 1 OS=Pelotomaculum thermopropio... [more]
GCH1_THETN4.109e-1435.56GTP cyclohydrolase 1 OS=Thermoanaerobacter tengcon... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659896 ID=EY659896; Name=EY659896; organism=Citrus sinensis; type=EST; length=885bp
TCAAACAACGCCGCGTCCGAATAATCATTCCCAAAAAACGTATCCTCTTT
CTTTTCCCTTACCCTCTCCCTCTACTGCTTCTGCTCCCTATCTCTTCACA
TCTCTCTTCTTCTCGCTGTTCTTATTGTCTCTGGCTACCTCTTCTTTTCT
TTTTTCCTCTCTCTCCCCTTTTTTTCTTAATTGACAGTTTTACAAAAAAT
TGATTTTTTATTTTTGTGTGTTCCAGAACCAATCTCTTTTCGAGTTTCCA
ATATCAATATCAATATCAATATCAAAGTTGTTTTGTGTGTACTTTTTTGG
GTTTTTGATTGGTTTGTTTATCTGGGTTGTTGTTATTTTGTGTGTCTCTC
AATCAAATGGGCGCTTTGGATGAGGGACATTTCGATTTGGAGCTTGAGAA
TGGAGTGAAACTGAGTAGCCTTGAGCTTGGCTTTGAGCAAGAACCAGACG
CGCTCGCTATTGAGGATGCCGTCAAAGTTCTCTTGCAAGGATTAGGTGAA
GATATTAATAGAGAAGGCATCAAGAAGACTCCTCATCGCGTTGCCAAAGC
TCTTCGTGAAGGAACCAAAGGTTACACACAAAATGTAAAAGACATTGTTG
AAGGTGCTTTGTTCCCTGAAGCANGTGTGGATCATGGAATTGGTCATGCC
GGAGGAGCAGGTGGGCTTGTGATTGTTCGAGATCTTGACCTCTTCTCATA
CTGCCAGTCTTGTTTGCTTCCTTTTCAGGTTAAAGTTCATGTANGCTATG
TGCCATCTGGTCAACGAGTTTTGGGATTAAGCAAGTCTCCAGAGTTGCTG
AAGTCTTTTCAAACGACTCCAAAACCACAGCGTCTAACAGATGAAGTGTG
TCAGCTTTGCACATGGTATCAGCCGGGCAGTGTTG
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