EY659896

Overview
NameEY659896
Unique NameEY659896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_METCA (GTP cyclohydrolase 1 OS=Methylococcus capsulatus GN=folE PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.109e-14
Identity = 47/131 (35.88%), Postives = 74/131 (56.49%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            +E     L+Q +GED++REG+  TP R A A R    GY Q++  ++  A+F     D           +VIV+D++L+S C+  LLPF  K HV Y+P G +V+GLSK   +++ +    + Q RLT ++
Sbjct:    5 METLFSQLIQEIGEDVSREGLVDTPKRAASAFRFLNSGYHQSLDHVLNNAVFEADSED-----------MVIVKDIELYSLCEHHLLPFIGKCHVGYLPQG-KVIGLSKIARIVEMYARRLQIQERLTKQI 123          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_BACTN (GTP cyclohydrolase 1 OS=Bacteroides thetaiotaomicron GN=folE PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.109e-14
Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 3
Query:  492 LGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            LGED  REG+ KTP RVAKA+   TKGY  +  +++  A F E               +VIV+D+D FS C+  +LPF  K HV Y+P+G  + GLSK   ++  F
Sbjct:   26 LGEDAGREGLLKTPERVAKAMLSLTKGYHMDPHEVLRSAKFQE-----------EYSQMVIVKDIDFFSLCEHHMLPFYGKAHVAYIPNGY-ITGLSKIARVVDIF 119          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CLOPE (GTP cyclohydrolase 1 OS=Clostridium perfringens GN=folE PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.366e-14
Identity = 45/135 (33.33%), Postives = 74/135 (54.81%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            D   I++ +K++L+ +GED+NREG+ +TP R+A+   E   G   N K+ +                      LV+ +D+  +S C+  L+PF  KVH+ Y+P+G RV+GLSK    ++ +   P+ Q RLT E+
Sbjct:    3 DKEKIKEGMKLILEAIGEDVNREGLIETPDRIARMYEEIFSGIGMNAKEHLSKTF------------EVHSNDLVLEKDITFYSMCEHHLVPFYGKVHIAYIPNG-RVVGLSKLARCVEVYSKKPQLQERLTKEI 124          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_BACFR (GTP cyclohydrolase 1 OS=Bacteroides fragilis GN=folE PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.366e-14
Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 3
Query:  492 LGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            LGED  REG+ KTP RVAKA+   TKGY  +  +++  A F E               +VIV+D+D FS C+  +LPF  K HV Y+P+G  + GLSK   ++  F
Sbjct:   26 LGEDAEREGLLKTPERVAKAMLTLTKGYHMDPHEVLRSAKFQE-----------EYSQMVIVKDIDFFSLCEHHMLPFYGKAHVAYIPNGY-ITGLSKIARVVDIF 119          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_BACFN (GTP cyclohydrolase 1 OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=folE PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.366e-14
Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 3
Query:  492 LGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSF 809
            LGED  REG+ KTP RVAKA+   TKGY  +  +++  A F E               +VIV+D+D FS C+  +LPF  K HV Y+P+G  + GLSK   ++  F
Sbjct:   26 LGEDAEREGLLKTPERVAKAMLTLTKGYHMDPHEVLRSAKFQE-----------EYSQMVIVKDIDFFSLCEHHMLPFYGKAHVAYIPNGY-ITGLSKIARVVDIF 119          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CLOP1 (GTP cyclohydrolase 1 OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=folE PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.009e-14
Identity = 45/131 (34.35%), Postives = 72/131 (54.96%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            I + +K++L+ +GEDINREG+ +TP R+A+   E   G   N K+ +                      LV+ +D+  +S C+  L+PF  KVH+ Y+P+G RV+GLSK    ++ +   P+ Q RLT E+
Sbjct:    7 IREGMKLILEAIGEDINREGLIETPDRIARMYEEIFSGIGMNAKEHLSKTF------------EVHSNDLVLEKDITFYSMCEHHLVPFYGKVHIAYIPNG-RVVGLSKLARCVEVYSKKPQLQERLTTEI 124          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_THEPX (GTP cyclohydrolase 1 OS=Thermoanaerobacter sp. (strain X514) GN=folE PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.154e-14
Identity = 48/135 (35.56%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            D   I+ AV+ +L+ +GED +REG+ +TP RVA+   E   G   +VKD+++  +F E               +++V+D+ L+S C+  LLPF    HV Y+P   R+LGLSK   ++      P+ Q RLT E+
Sbjct:    3 DKEKIKKAVRDILEAIGEDPDREGLLETPDRVARMYEEIFAGLHTDVKDVIK--IFQE----------DEHQEIILVKDIPLYSMCEHHLLPFIGVAHVAYLPRKGRILGLSKLARIVDILAKRPQLQERLTSEI 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_THEP3 (GTP cyclohydrolase 1 OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=folE PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.154e-14
Identity = 48/135 (35.56%), Postives = 75/135 (55.56%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            D   I+ AV+ +L+ +GED +REG+ +TP RVA+   E   G   +VKD+++  +F E               +++V+D+ L+S C+  LLPF    HV Y+P   R+LGLSK   ++      P+ Q RLT E+
Sbjct:    3 DKEKIKKAVRDILEAIGEDPDREGLLETPDRVARMYEEIFAGLHTDVKDVIK--IFQE----------DEHQEIILVKDIPLYSMCEHHLLPFIGVAHVAYLPRKGRILGLSKLARIVDILAKRPQLQERLTSEI 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRMU (GTP cyclohydrolase 1 OS=Streptococcus mutans GN=folE PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.196e-13
Identity = 52/135 (38.52%), Postives = 72/135 (53.33%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            D   IE+AV  LL+ LGED NREG+  TP RVAK  +E   G  ++ KD    A+F E   D           +V+V+D+  +S C+  L+PF    HV Y+PS   V GLSK    ++     P+ Q RLT ++
Sbjct:    8 DQKKIEEAVYQLLEALGEDPNREGLLDTPKRVAKMYQEMFAGLNEDPKDQFT-AVFSEEHED-----------VVLVKDIPFYSMCEHHLVPFHGLAHVAYIPSDGCVTGLSKLARAVEVVSKRPQLQERLTVQI 130          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_AQUAE (GTP cyclohydrolase 1 OS=Aquifex aeolicus GN=folE PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.196e-13
Identity = 47/135 (34.81%), Postives = 77/135 (57.04%), Query Frame = 3
Query:  447 DALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            D   I+ AV++ L+G+GED +REG+K+TP RVA+   E  +    ++K   E   + E               +V+V+D+  +S C+  LLPF  KVH+ Y+P  +++ GLSK    +++F   P+ Q RLT+E+
Sbjct:    4 DKEKIKQAVRLFLEGIGEDPDREGLKETPERVARMWEEFERMRNFDMKLFEEFGGYNE---------------MVLVKDIKFYSLCEHHLLPFFGKVHIAYIPD-KKISGLSKLVRTVRAFALRPQVQERLTEEI 122          
The following BLAST results are available for this feature:
BLAST of EY659896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
GCH1_METCA4.109e-1435.88GTP cyclohydrolase 1 OS=Methylococcus capsulatus G... [more]
GCH1_BACTN4.109e-1441.51GTP cyclohydrolase 1 OS=Bacteroides thetaiotaomicr... [more]
GCH1_CLOPE5.366e-1433.33GTP cyclohydrolase 1 OS=Clostridium perfringens GN... [more]
GCH1_BACFR5.366e-1441.51GTP cyclohydrolase 1 OS=Bacteroides fragilis GN=fo... [more]
GCH1_BACFN5.366e-1441.51GTP cyclohydrolase 1 OS=Bacteroides fragilis (stra... [more]
GCH1_CLOP17.009e-1434.35GTP cyclohydrolase 1 OS=Clostridium perfringens (s... [more]
GCH1_THEPX9.154e-1435.56GTP cyclohydrolase 1 OS=Thermoanaerobacter sp. (st... [more]
GCH1_THEP39.154e-1435.56GTP cyclohydrolase 1 OS=Thermoanaerobacter pseudet... [more]
GCH1_STRMU1.196e-1338.52GTP cyclohydrolase 1 OS=Streptococcus mutans GN=fo... [more]
GCH1_AQUAE1.196e-1334.81GTP cyclohydrolase 1 OS=Aquifex aeolicus GN=folE P... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659896 ID=EY659896; Name=EY659896; organism=Citrus sinensis; type=EST; length=885bp
TCAAACAACGCCGCGTCCGAATAATCATTCCCAAAAAACGTATCCTCTTT
CTTTTCCCTTACCCTCTCCCTCTACTGCTTCTGCTCCCTATCTCTTCACA
TCTCTCTTCTTCTCGCTGTTCTTATTGTCTCTGGCTACCTCTTCTTTTCT
TTTTTCCTCTCTCTCCCCTTTTTTTCTTAATTGACAGTTTTACAAAAAAT
TGATTTTTTATTTTTGTGTGTTCCAGAACCAATCTCTTTTCGAGTTTCCA
ATATCAATATCAATATCAATATCAAAGTTGTTTTGTGTGTACTTTTTTGG
GTTTTTGATTGGTTTGTTTATCTGGGTTGTTGTTATTTTGTGTGTCTCTC
AATCAAATGGGCGCTTTGGATGAGGGACATTTCGATTTGGAGCTTGAGAA
TGGAGTGAAACTGAGTAGCCTTGAGCTTGGCTTTGAGCAAGAACCAGACG
CGCTCGCTATTGAGGATGCCGTCAAAGTTCTCTTGCAAGGATTAGGTGAA
GATATTAATAGAGAAGGCATCAAGAAGACTCCTCATCGCGTTGCCAAAGC
TCTTCGTGAAGGAACCAAAGGTTACACACAAAATGTAAAAGACATTGTTG
AAGGTGCTTTGTTCCCTGAAGCANGTGTGGATCATGGAATTGGTCATGCC
GGAGGAGCAGGTGGGCTTGTGATTGTTCGAGATCTTGACCTCTTCTCATA
CTGCCAGTCTTGTTTGCTTCCTTTTCAGGTTAAAGTTCATGTANGCTATG
TGCCATCTGGTCAACGAGTTTTGGGATTAAGCAAGTCTCCAGAGTTGCTG
AAGTCTTTTCAAACGACTCCAAAACCACAGCGTCTAACAGATGAAGTGTG
TCAGCTTTGCACATGGTATCAGCCGGGCAGTGTTG
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