EY659896

Overview
NameEY659896
Unique NameEY659896
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRT2 (GTP cyclohydrolase 1 OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=folE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.561e-13
Identity = 50/131 (38.17%), Postives = 71/131 (54.20%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            +E AV  LL+ LGE+  REG+  TP RVAK   E   G  ++ KD    A+F E   +           +V+V+D+  +S C+  L+PF    HV Y+PSG +V GLSK    ++     P+ Q RLTD+V
Sbjct:    7 VEQAVYQLLEALGENPEREGLLDTPKRVAKMYAEMFSGLNEDPKDQFT-AVFSEVHDE-----------VVLVKDIPFYSMCEHHLVPFYGMAHVAYLPSGDKVTGLSKLARAVEVAARRPQLQERLTDQV 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRT1 (GTP cyclohydrolase 1 OS=Streptococcus thermophilus (strain CNRZ 1066) GN=folE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.561e-13
Identity = 50/131 (38.17%), Postives = 71/131 (54.20%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            +E AV  LL+ LGE+  REG+  TP RVAK   E   G  ++ KD    A+F E   +           +V+V+D+  +S C+  L+PF    HV Y+PSG +V GLSK    ++     P+ Q RLTD+V
Sbjct:    7 VEQAVYQLLEALGENPEREGLLDTPKRVAKMYAEMFSGLNEDPKDQFT-AVFSEVHDE-----------VVLVKDIPFYSMCEHHLVPFYGMAHVAYLPSGDKVTGLSKLARAVEVAARRPQLQERLTDQV 125          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRA5 (GTP cyclohydrolase 1 OS=Streptococcus agalactiae serotype V GN=folE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.561e-13
Identity = 51/138 (36.96%), Postives = 74/138 (53.62%), Query Frame = 3
Query:  444 PDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            P+   +E A+   L+ LGE+ NREG+K TP RVAK   E   G  Q+ K+    A+F E   +           +VIV+D+  +S C+  L+PF  K H+ Y+P+  RV GLSK    ++     P+ Q RLT +V Q
Sbjct:    2 PNQEKMEKAIYQFLEALGENPNREGLKDTPKRVAKMYIEMFSGLNQDPKEQFT-AVFSENHEE-----------VVIVKDIPFYSMCEHHLVPFYGKAHIAYLPNDGRVTGLSKLARAVEVASKRPQLQERLTAQVAQ 127          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_DEIRA (GTP cyclohydrolase 1 OS=Deinococcus radiodurans GN=folE PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.561e-13
Identity = 45/131 (34.35%), Postives = 73/131 (55.73%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            +E   +  L  +GED +REG+++TP RVAKA    T+GY Q +  +V   +F     +           +VIV+D++ +S C+  +LPF  + HV Y+P G R+LGLSK   ++  +    + Q R+T +V
Sbjct:   32 LEPLTREWLAAIGEDPDREGLQRTPQRVAKAWAYMTEGYGQTLAQVVGEGVFAAEGSE-----------MVIVKDIEFYSMCEHHMLPFYGRAHVAYIP-GTRILGLSKFARIVDLYSRRLQVQERITTQV 150          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_BACSU (GTP cyclohydrolase 1 OS=Bacillus subtilis GN=folE PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.039e-13
Identity = 47/133 (35.34%), Postives = 72/133 (54.14%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            IE AV+ +L+ +GED NREG+  TP RVAK   E   G  ++ K+  +  +F E   +           LV+V+D+   S C+  L+PF  K HV Y+P G +V GLSK    +++    P+ Q R+T  + +
Sbjct:    9 IEQAVRQILEAIGEDPNREGLLDTPKRVAKMYAEVFSGLNEDPKEHFQ-TIFGENHEE-----------LVLVKDIAFHSMCEHHLVPFYGKAHVAYIPRGGKVTGLSKLARAVEAVAKRPQLQERITSTIAE 129          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_CLOPS (GTP cyclohydrolase 1 OS=Clostridium perfringens (strain SM101 / Type A) GN=folE PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.663e-13
Identity = 44/131 (33.59%), Postives = 71/131 (54.20%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            I + +K++L+ +GED NREG+ +TP R+A+   E   G   N K+ +                      LV+ +D+  +S C+  L+PF  KVH+ Y+P+G RV+GLSK    ++ +   P+ Q RLT E+
Sbjct:    7 IREGMKLILEAIGEDANREGLIETPDRIARMYEEIFSGIGMNAKEHLSKTF------------EVHSNDLVLEKDITFYSMCEHHLVPFYGKVHIAYIPNG-RVVGLSKLARCVEVYSKKPQLQERLTTEI 124          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRCO (GTP cyclohydrolase 1 OS=Streptomyces coelicolor GN=folE PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.478e-13
Identity = 48/138 (34.78%), Postives = 76/138 (55.07%), Query Frame = 3
Query:  441 EPDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPS-GQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            E D    E+AV+ LL  +GED +REG+++TP RVA+A RE   G  Q  +D++                      +V+V+D+++FS C+  L+PF+   HV Y+PS   ++ GLSK   L+  +   P+ Q RLT ++
Sbjct:   15 EFDEKRAENAVRELLIAVGEDPDREGLRETPARVARAYREIFAGLWQEPEDVLTTTF------------DLGHDEMVLVKDIEVFSTCEHHLVPFRGVAHVGYIPSTSGKITGLSKLARLVDVYARRPQVQERLTTQI 140          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_BACHD (GTP cyclohydrolase 1 OS=Bacillus halodurans GN=folE PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.478e-13
Identity = 48/131 (36.64%), Postives = 71/131 (54.20%), Query Frame = 3
Query:  459 IEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEV 848
            I+ AV ++L+ +GED  REG++ TP RVAK   E   G  Q+ K+     +F E   +           LV+V+D+  FS C+  L+PF  K HV Y+P G +V GLSK    +++    P+ Q R+T  V
Sbjct:    9 IQQAVVMILEAIGEDPAREGLEDTPKRVAKMYEEVFAGLNQDPKEHF-ATIFGEDHEE-----------LVLVKDIPFFSMCEHHLVPFFGKAHVGYIPKGGKVTGLSKLARAVEAVARRPQLQERITSTV 127          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRA3 (GTP cyclohydrolase 1 OS=Streptococcus agalactiae serotype III GN=folE PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.933e-13
Identity = 51/141 (36.17%), Postives = 76/141 (53.90%), Query Frame = 3
Query:  444 PDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPK----PQRLTDEVCQ 854
            P+   +E A+   L+ LGE+ +REG+K TP RVAK   E   G  Q+ K+    A+F E   +           +VIV+D+  +S C+  L+PF  K H+ Y+P+  RV GLSK   L ++F+   K     +RLT +V Q
Sbjct:    2 PNQEKMEKAIYQFLEALGENPDREGLKDTPKRVAKMYIEMFSGLNQDPKEQFT-AVFSENHEE-----------VVIVKDIPFYSMCEHHLVPFYGKAHIAYLPNDGRVTGLSK---LARAFEVASKRPQLQERLTAQVAQ 127          
BLAST of EY659896 vs. ExPASy Swiss-Prot
Match: GCH1_STRA1 (GTP cyclohydrolase 1 OS=Streptococcus agalactiae serotype Ia GN=folE PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.933e-13
Identity = 50/138 (36.23%), Postives = 74/138 (53.62%), Query Frame = 3
Query:  444 PDALAIEDAVKVLLQGLGEDINREGIKKTPHRVAKALREGTKGYTQNVKDIVEGALFPEAXVDXXXXXXXXXXXLVIVRDLDLFSYCQSCLLPFQVKVHVXYVPSGQRVLGLSKSPELLKSFQTTPKPQ-RLTDEVCQ 854
            P+   +E A+   L+ LGE+ +REG+K TP RVAK   E   G  Q+ K+    A+F E   +           +VIV+D+  +S C+  L+PF  K H+ Y+P+  RV GLSK    ++     P+ Q RLT +V Q
Sbjct:    2 PNQEKMEKAIYQFLEALGENPDREGLKDTPKRVAKMYIEMFSGLNQDPKEQFT-AVFSENHEE-----------VVIVKDIPFYSMCEHHLVPFYGKAHIAYLPNDGRVTGLSKLARAVEVASKRPQLQERLTAQVAQ 127          
The following BLAST results are available for this feature:
BLAST of EY659896 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 175
Match NameE-valueIdentityDescription
GCH1_STRT21.561e-1338.17GTP cyclohydrolase 1 OS=Streptococcus thermophilus... [more]
GCH1_STRT11.561e-1338.17GTP cyclohydrolase 1 OS=Streptococcus thermophilus... [more]
GCH1_STRA51.561e-1336.96GTP cyclohydrolase 1 OS=Streptococcus agalactiae s... [more]
GCH1_DEIRA1.561e-1334.35GTP cyclohydrolase 1 OS=Deinococcus radiodurans GN... [more]
GCH1_BACSU2.039e-1335.34GTP cyclohydrolase 1 OS=Bacillus subtilis GN=folE ... [more]
GCH1_CLOPS2.663e-1333.59GTP cyclohydrolase 1 OS=Clostridium perfringens (s... [more]
GCH1_STRCO3.478e-1334.78GTP cyclohydrolase 1 OS=Streptomyces coelicolor GN... [more]
GCH1_BACHD3.478e-1336.64GTP cyclohydrolase 1 OS=Bacillus halodurans GN=fol... [more]
GCH1_STRA35.933e-1336.17GTP cyclohydrolase 1 OS=Streptococcus agalactiae s... [more]
GCH1_STRA15.933e-1336.23GTP cyclohydrolase 1 OS=Streptococcus agalactiae s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-C09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659896 ID=EY659896; Name=EY659896; organism=Citrus sinensis; type=EST; length=885bp
TCAAACAACGCCGCGTCCGAATAATCATTCCCAAAAAACGTATCCTCTTT
CTTTTCCCTTACCCTCTCCCTCTACTGCTTCTGCTCCCTATCTCTTCACA
TCTCTCTTCTTCTCGCTGTTCTTATTGTCTCTGGCTACCTCTTCTTTTCT
TTTTTCCTCTCTCTCCCCTTTTTTTCTTAATTGACAGTTTTACAAAAAAT
TGATTTTTTATTTTTGTGTGTTCCAGAACCAATCTCTTTTCGAGTTTCCA
ATATCAATATCAATATCAATATCAAAGTTGTTTTGTGTGTACTTTTTTGG
GTTTTTGATTGGTTTGTTTATCTGGGTTGTTGTTATTTTGTGTGTCTCTC
AATCAAATGGGCGCTTTGGATGAGGGACATTTCGATTTGGAGCTTGAGAA
TGGAGTGAAACTGAGTAGCCTTGAGCTTGGCTTTGAGCAAGAACCAGACG
CGCTCGCTATTGAGGATGCCGTCAAAGTTCTCTTGCAAGGATTAGGTGAA
GATATTAATAGAGAAGGCATCAAGAAGACTCCTCATCGCGTTGCCAAAGC
TCTTCGTGAAGGAACCAAAGGTTACACACAAAATGTAAAAGACATTGTTG
AAGGTGCTTTGTTCCCTGAAGCANGTGTGGATCATGGAATTGGTCATGCC
GGAGGAGCAGGTGGGCTTGTGATTGTTCGAGATCTTGACCTCTTCTCATA
CTGCCAGTCTTGTTTGCTTCCTTTTCAGGTTAAAGTTCATGTANGCTATG
TGCCATCTGGTCAACGAGTTTTGGGATTAAGCAAGTCTCCAGAGTTGCTG
AAGTCTTTTCAAACGACTCCAAAACCACAGCGTCTAACAGATGAAGTGTG
TCAGCTTTGCACATGGTATCAGCCGGGCAGTGTTG
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