EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3535 contig Csv1_Contig3535:1..854. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SALCH (Glucose-1-phosphate adenylyltransferase OS=Salmonella choleraesuis GN=glgC PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.732e-34
Identity = 76/174 (43.68%), Postives = 105/174 (60.34%), Query Frame = 1 
Query:  307 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNCLNS I +I V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +    +++LAGDH+Y+ DY R +  H E  A  TV  +P+  K
Sbjct:    2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SLFSEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIK 173

HSP 2 Score: 28.4906 bits (62), Expect = 6.732e-34
Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 3 
Query:  825 KRPTAFGLMKIDEEGRLLNFLE 890
            K  TAFG+M +DE  ++++F+E
Sbjct:  173 KEATAFGVMAVDESDKIIDFVE 194
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SALA4 (Glucose-1-phosphate adenylyltransferase OS=Salmonella agona (strain SL483) GN=glgC PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.732e-34
Identity = 76/174 (43.68%), Postives = 105/174 (60.34%), Query Frame = 1 
Query:  307 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNCLNS I +I V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +    +++LAGDH+Y+ DY R +  H E  A  TV  +P+  K
Sbjct:    2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SLFSEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIK 173

HSP 2 Score: 28.4906 bits (62), Expect = 6.732e-34
Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 3 
Query:  825 KRPTAFGLMKIDEEGRLLNFLE 890
            K  TAFG+M +DE  ++++F+E
Sbjct:  173 KEATAFGVMAVDESDKIIDFVE 194
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SALAR (Glucose-1-phosphate adenylyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=glgC PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.768e-34
Identity = 76/174 (43.68%), Postives = 105/174 (60.34%), Query Frame = 1 
Query:  307 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNCLNS I +I V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +    +++LAGDH+Y+ DY R +  H E  A  TV  +P+  K
Sbjct:    2 VSLEKNDRLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SLFSEEMNE-FVDLLPAQQRMQGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIK 173

HSP 2 Score: 28.1054 bits (61), Expect = 8.768e-34
Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 3 
Query:  825 KRPTAFGLMKIDEEGRLLNFLE 890
            K  TAFG+M +DE  ++++F+E
Sbjct:  173 KEATAFGVMAVDESEKIIDFVE 194
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_THET8 (Glucose-1-phosphate adenylyltransferase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=glgC PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 8.773e-34
Identity = 70/156 (44.87%), Postives = 99/156 (63.46%), Query Frame = 1 
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPED---PNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            VLG+IL GG G+RLYPLT KRAKPAVP GA YR+ID  ++N +NS I  IYVLTQ+ + SL  H+ R +    G +  + F+ ++ AQ    +   P W++GTADA+ Q L L   H    + V  GDH+++M+    ++ H +T ADIT+ A P+
Sbjct:    6 VLGMILAGGQGSRLYPLTAKRAKPAVPFGAKYRIIDFVLNNFVNSGIYAIYVLTQYKAQSLTEHIQRYW--RFGAFLEDHFILLVPAQMYRYEELGPVWYRGTADAIYQNLHLVHNHAPKAVAVFGGDHIFKMNIRHMVEYHYDTRADITIAAYPV 159

HSP 2 Score: 26.5646 bits (57), Expect = 8.773e-34
Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 3 
Query:  834 TAFGLMKIDEEGRLLNFLENQKE 902
            T FG++++DEE R+  F E  +E
Sbjct:  165 TRFGVLQVDEEWRITEFQEKPEE 187
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_THET2 (Glucose-1-phosphate adenylyltransferase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=glgC PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 8.773e-34
Identity = 70/156 (44.87%), Postives = 99/156 (63.46%), Query Frame = 1 
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPED---PNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            VLG+IL GG G+RLYPLT KRAKPAVP GA YR+ID  ++N +NS I  IYVLTQ+ + SL  H+ R +    G +  + F+ ++ AQ    +   P W++GTADA+ Q L L   H    + V  GDH+++M+    ++ H +T ADIT+ A P+
Sbjct:    6 VLGMILAGGQGSRLYPLTAKRAKPAVPFGAKYRIIDFVLNNFVNSGIYAIYVLTQYKAQSLTEHIQRYW--RFGAFLEDHFILLVPAQMYRYEELGPVWYRGTADAIYQNLHLVHNHAPKAVAVFGGDHIFKMNIRHMVEYHYDTRADITIAAYPV 159

HSP 2 Score: 26.5646 bits (57), Expect = 8.773e-34
Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 3 
Query:  834 TAFGLMKIDEEGRLLNFLENQKE 902
            T FG++++DEE R+  F E  +E
Sbjct:  165 TRFGVLQVDEEWRITEFQEKPEE 187
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_THECA (Glucose-1-phosphate adenylyltransferase OS=Thermus caldophilus GN=glgC PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 8.773e-34
Identity = 70/156 (44.87%), Postives = 99/156 (63.46%), Query Frame = 1 
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPED---PNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            VLG+IL GG G+RLYPLT KRAKPAVP GA YR+ID  ++N +NS I  IYVLTQ+ + SL  H+ R +    G +  + F+ ++ AQ    +   P W++GTADA+ Q L L   H    + V  GDH+++M+    ++ H +T ADIT+ A P+
Sbjct:    6 VLGMILAGGQGSRLYPLTAKRAKPAVPFGAKYRIIDFVLNNFVNSGIYAIYVLTQYKAQSLTEHIQRYW--RFGAFLEDHFILLVPAQMYRYEELGPVWYRGTADAIYQNLHLVHNHAPKAVAVFGGDHIFKMNIRHMVEYHYDTRADITIAAYPV 159

HSP 2 Score: 26.5646 bits (57), Expect = 8.773e-34
Identity = 10/23 (43.48%), Postives = 16/23 (69.57%), Query Frame = 3 
Query:  834 TAFGLMKIDEEGRLLNFLENQKE 902
            T FG++++DEE R+  F E  +E
Sbjct:  165 TRFGVLQVDEEWRITEFQEKPEE 187
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BURPP (Glucose-1-phosphate adenylyltransferase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=glgC PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.488e-33
Identity = 76/156 (48.72%), Postives = 100/156 (64.10%), Query Frame = 1 
Query:  346 EASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +  R+ L I+L GG GTRL PLT KR KPAV  G  YR+ID  +SNCLNS I +I V+TQ+ + SL RHL R + S + G   E F+++  AQQ  E  +W++GTADAV Q L +        ++VLAGDH+Y+MDY R I  H E+ AD TV  +
Sbjct:    9 DLQRTTLAIVLAGGRGTRLGPLTNKRVKPAVHFGGKYRIIDFALSNCLNSGIRRIAVVTQYKAHSLLRHLQRGW-SFLRGEMGE-FIDLWPAQQRVEGAHWYRGTADAVFQNLDIIRSIRPKYVVVLAGDHIYKMDYTRMIADHAESGADCTVGCI 162

HSP 2 Score: 23.0978 bits (48), Expect = 1.488e-33
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 3 
Query:  837 AFGLMKIDEEGRLLNFLE 890
            AFG+M +D   R+ +FLE
Sbjct:  171 AFGVMHVDANRRVTDFLE 188
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_BURP8 (Glucose-1-phosphate adenylyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=glgC PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.488e-33
Identity = 71/156 (45.51%), Postives = 97/156 (62.18%), Query Frame = 1 
Query:  346 EASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +   + L I+L GG GTRL PLT KR KPAV  G  YR+ID  +SNCLNS I +I V+TQ+ + SL RH+ R +    G +    F+++  AQQ  E  +W++GTADAV Q L +        ++VLAGDH+Y+MDY R +  H E+ AD TV  +
Sbjct:    9 DLQHTTLAIVLAGGRGTRLGPLTNKRVKPAVHFGGKYRIIDFALSNCLNSGIRRIAVVTQYKAHSLLRHVQRGWGFLRGEFNE--FIDLWPAQQRVEGAHWYRGTADAVFQNLDIIRSIRPKYVVVLAGDHIYKMDYTRMVMDHVESKADCTVGCI 162

HSP 2 Score: 25.7942 bits (55), Expect = 1.488e-33
Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 3 
Query:  837 AFGLMKIDEEGRLLNFLE 890
            AFG+M +DEE R+  F+E
Sbjct:  171 AFGVMHVDEERRVTGFVE 188
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SALTI (Glucose-1-phosphate adenylyltransferase OS=Salmonella typhi GN=glgC PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 1.937e-33
Identity = 76/174 (43.68%), Postives = 105/174 (60.34%), Query Frame = 1 
Query:  307 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            VS  KN +  L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNCLNS I +I V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +    +++LAGDH+Y+ DY R +  H E  A  TV  +P+  K
Sbjct:    2 VSLEKNDRVMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCLNSGIRRIGVITQYQSHTLVQHIQRGW-SLFSEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRCYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPVPIK 173

HSP 2 Score: 28.4906 bits (62), Expect = 1.937e-33
Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 3 
Query:  825 KRPTAFGLMKIDEEGRLLNFLE 890
            K  TAFG+M +DE  ++++F+E
Sbjct:  173 KEATAFGVMAVDENDKIIDFVE 194
[Close]
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_THICR (Glucose-1-phosphate adenylyltransferase OS=Thiomicrospira crunogena (strain XCL-2) GN=glgC PE=3 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.476e-33
Identity = 75/156 (48.08%), Postives = 101/156 (64.74%), Query Frame = 1 
Query:  346 EASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            + +R  L ++L GG G+RL  LTK RAKPAVP G  YR+ID  +SNC+NS I KI VLTQ+ S SL RH+ RA+  +   Y+   FVE+L AQQ   D  W++GTADA+ Q L +   H    +LVL GDH+Y MDY + +  H E+ AD+T+  +
Sbjct:   12 DLTRKTLALVLAGGEGSRLKDLTKWRAKPAVPFGGKYRIIDFVLSNCVNSGIRKIGVLTQYKSHSLIRHVQRAW--SFMRYEVGEFVELLPAQQR-VDKGWYKGTADALYQNLDIMRRHTPDYVLVLGGDHIYSMDYSKMLYEHAESGADVTIGCI 164
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGC_SALCH6.732e-3443.68Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALA46.732e-3443.68Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_SALAR8.768e-3443.68Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_THET88.773e-3444.87Glucose-1-phosphate adenylyltransferase OS=Thermus... [more]
GLGC_THET28.773e-3444.87Glucose-1-phosphate adenylyltransferase OS=Thermus... [more]
GLGC_THECA8.773e-3444.87Glucose-1-phosphate adenylyltransferase OS=Thermus... [more]
GLGC_BURPP1.488e-3348.72Glucose-1-phosphate adenylyltransferase OS=Burkhol... [more]
GLGC_BURP81.488e-3345.51Glucose-1-phosphate adenylyltransferase OS=Burkhol... [more]
GLGC_SALTI1.937e-3343.68Glucose-1-phosphate adenylyltransferase OS=Salmone... [more]
GLGC_THICR2.476e-3348.08Glucose-1-phosphate adenylyltransferase OS=Thiomic... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
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