EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3535 contig Csv1_Contig3535:1..854. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHOBA (Glucose-1-phosphate adenylyltransferase OS=Rhodopirellula baltica GN=glgC PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 4.223e-33
Identity = 71/153 (46.41%), Postives = 104/153 (67.97%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            R  + +IL GG G+RL PLT+ RAKPAVP+G  YR+ID  +SNCLNS++ ++ +LTQ+ + SL+RH++ A+ +       E F++V+  QQ  +D NW+QGTADAV Q ++  E      +++LAGDHLY+M+YE  +  H    AD+TV AL
Sbjct:   23 RQTVTVILAGGRGSRLEPLTRDRAKPAVPIGGAYRIIDFVLSNCLNSDMRRLLLLTQYKAQSLDRHINVAWRNYFCRELGE-FIDVVPPQQRIDD-NWYQGTADAVYQNIYAIEREAPEYVVILAGDHLYKMNYESMVNFHHRKGADVTVGAL 173          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC2_ALHEH (Glucose-1-phosphate adenylyltransferase 2 OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glgC2 PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 9.408e-33
Identity = 78/160 (48.75%), Postives = 105/160 (65.62%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            +R+ L +IL GG G+RL  LT  RAKPAVP G  +R+ID  +SNC+NS I +I VLTQ+ + SL RHL   + S  G +    FVE+L AQQ  E  +W++GTADAV Q L +   H+   +L+LAGDH+Y+MDY   +  H ET AD+TV  L  P++E
Sbjct:   14 TRNTLVLILAGGRGSRLMDLTTWRAKPAVPFGGKFRIIDFTLSNCINSGIRRIGVLTQYKAHSLIRHLRLGWGSLRGDFGE--FVEILPAQQRTEG-SWYRGTADAVYQSLDIVRMHDPDYVLILAGDHVYKMDYGPMLARHVETGADVTVGCLEVPVEE 170          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC1_ALHEH (Glucose-1-phosphate adenylyltransferase 1 OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=glgC1 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.229e-32
Identity = 73/159 (45.91%), Postives = 100/159 (62.89%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            +R  L +I+ GG G RL  LT  R KPAVP G  +RLID P+SNC+NS I +I VLTQ+ + SL +H+ R +    G +    FVE++ AQQ  + P W+ GTADAV Q + + + HN   +LVLAGDH+Y+MDY   I  H E+ A +TV  + +  K
Sbjct:   14 TRDTLALIMAGGRGGRLSNLTDWRTKPAVPFGGKFRLIDFPLSNCINSGIRRIEVLTQYKAHSLIQHIQRGWGFLRGEFGE--FVELVPAQQRMDKPLWYAGTADAVYQNIDIIKAHNPSYVLVLAGDHVYKMDYGGMIARHAESGAAMTVGCVEVPRK 170          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_DECAR (Glucose-1-phosphate adenylyltransferase OS=Dechloromonas aromatica (strain RCB) GN=glgC PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.231e-32
Identity = 72/160 (45.00%), Postives = 102/160 (63.75%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL--PMDE 825
            +R+   IIL GG GTRL  LT  R+KPAVP    +R++D  +SNC+NS I KI V TQ+ + SL RH+ R ++   G +  + F+++L AQQ  ++  W+QGTADAV Q L     +    ILV+AGDH+Y+MDY R +  H +  AD+TV  +  P+DE
Sbjct:   28 TRNTFAIILAGGRGTRLKQLTDFRSKPAVPFAGKFRILDFTLSNCVNSGIRKIGVATQYKAHSLIRHIQRGWSFLDGRF--DEFIQLLPAQQQIDETQWYQGTADAVYQNLHFLRRYQPDHILVVAGDHIYKMDYGRMLAHHVKHHADMTVACIDVPLDE 185          

HSP 2 Score: 24.6386 bits (52), Expect = 1.231e-32
Identity = 8/17 (47.06%), Postives = 15/17 (88.24%), Query Frame = 3
Query:  840 FGLMKIDEEGRLLNFLE 890
            FG+M +DE+ R+++F+E
Sbjct:  189 FGVMGVDEQDRVIDFVE 205          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_DEIGD (Glucose-1-phosphate adenylyltransferase OS=Deinococcus geothermalis (strain DSM 11300) GN=glgC PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.232e-32
Identity = 68/156 (43.59%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  361 VLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPED---PNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            VLG+IL GG G+RL PLT KR+KPAVP G  YR+ID  ++N +NS +  IYVLTQ+ + SL  H+ R +    G +  + F+ ++ AQ    +     W++GTADAV Q L L +  N   + + +GDH+Y+M+ E  +QAH +  AD+T+ A PM
Sbjct:    5 VLGMILAGGQGSRLAPLTLKRSKPAVPFGGKYRIIDFAINNFINSGVFSIYVLTQYKAQSLTEHIQRGW--RFGTFLQDYFITLVPAQMYRYEELGAVWYRGTADAVYQNLHLIDNFNADYVAIFSGDHIYKMNVEHMLQAHMDARADVTIAAYPM 158          

HSP 2 Score: 24.2534 bits (51), Expect = 1.232e-32
Identity = 9/25 (36.00%), Postives = 16/25 (64.00%), Query Frame = 3
Query:  828 RPTAFGLMKIDEEGRLLNFLENQKE 902
            R   FG+M++D+  R+  FLE  ++
Sbjct:  162 RAHQFGVMQVDDRWRVTEFLEKPQD 186          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_NITMU (Glucose-1-phosphate adenylyltransferase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=glgC PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 3.542e-32
Identity = 70/162 (43.21%), Postives = 105/162 (64.81%), Query Frame = 1
Query:  346 EASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXA--LPMDE 825
            + +R+ + +IL GG GTRL  LT  RAKPAVP G  +R+ID P+SNC+NS I +I V TQ+ + SL  H+ + +    G ++   F+E+L AQQ  E+ +W+QGTADAV Q + +   HN   +L+L GDH+Y+MDY + +  H    A++T+    LP++E
Sbjct:   12 QITRNSIAMILAGGRGTRLRQLTDWRAKPAVPFGGKFRIIDFPLSNCVNSGIRRIGVATQYKAQSLISHIQQGWGFLDGRFQE--FIELLPAQQRTEE-SWYQGTADAVYQNIDILRSHNPDYVLILGGDHVYKMDYAKLLADHIAKSAEMTIACIDLPLEE 170          

HSP 2 Score: 23.8682 bits (50), Expect = 3.542e-32
Identity = 8/19 (42.11%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            +AFG+M + ++GR+ +F E
Sbjct:  172 SAFGVMSVTKDGRVTDFTE 190          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SHISS (Glucose-1-phosphate adenylyltransferase OS=Shigella sonnei (strain Ss046) GN=glgC PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.005e-32
Identity = 73/171 (42.69%), Postives = 103/171 (60.23%), Query Frame = 1
Query:  307 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +    +++LAGDH+Y+ DY R +  H E  A  TV  +P+
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPV 170          

HSP 2 Score: 25.0238 bits (53), Expect = 6.005e-32
Identity = 8/19 (42.11%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            +AFG+M +DE  +++ F+E
Sbjct:  176 SAFGVMAVDENDKIIEFVE 194          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SHIFL (Glucose-1-phosphate adenylyltransferase OS=Shigella flexneri GN=glgC PE=3 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 6.005e-32
Identity = 73/171 (42.69%), Postives = 103/171 (60.23%), Query Frame = 1
Query:  307 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +    +++LAGDH+Y+ DY R +  H E  A  TV  +P+
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPV 170          

HSP 2 Score: 25.0238 bits (53), Expect = 6.005e-32
Identity = 8/19 (42.11%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            +AFG+M +DE  +++ F+E
Sbjct:  176 SAFGVMAVDENDKIIEFVE 194          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SHIF8 (Glucose-1-phosphate adenylyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=glgC PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.005e-32
Identity = 73/171 (42.69%), Postives = 103/171 (60.23%), Query Frame = 1
Query:  307 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +    +++LAGDH+Y+ DY R +  H E  A  TV  +P+
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPV 170          

HSP 2 Score: 25.0238 bits (53), Expect = 6.005e-32
Identity = 8/19 (42.11%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            +AFG+M +DE  +++ F+E
Sbjct:  176 SAFGVMAVDENDKIIEFVE 194          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SHIDS (Glucose-1-phosphate adenylyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=glgC PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.005e-32
Identity = 73/171 (42.69%), Postives = 103/171 (60.23%), Query Frame = 1
Query:  307 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +    +++LAGDH+Y+ DY R +  H E  A  TV  +P+
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPV 170          

HSP 2 Score: 25.0238 bits (53), Expect = 6.005e-32
Identity = 8/19 (42.11%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            +AFG+M +DE  +++ F+E
Sbjct:  176 SAFGVMAVDENDKIIEFVE 194          
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGC_RHOBA4.223e-3346.41Glucose-1-phosphate adenylyltransferase OS=Rhodopi... [more]
GLGC2_ALHEH9.408e-3348.75Glucose-1-phosphate adenylyltransferase 2 OS=Alkal... [more]
GLGC1_ALHEH1.229e-3245.91Glucose-1-phosphate adenylyltransferase 1 OS=Alkal... [more]
GLGC_DECAR1.231e-3245.00Glucose-1-phosphate adenylyltransferase OS=Dechlor... [more]
GLGC_DEIGD1.232e-3243.59Glucose-1-phosphate adenylyltransferase OS=Deinoco... [more]
GLGC_NITMU3.542e-3243.21Glucose-1-phosphate adenylyltransferase OS=Nitroso... [more]
GLGC_SHISS6.005e-3242.69Glucose-1-phosphate adenylyltransferase OS=Shigell... [more]
GLGC_SHIFL6.005e-3242.69Glucose-1-phosphate adenylyltransferase OS=Shigell... [more]
GLGC_SHIF86.005e-3242.69Glucose-1-phosphate adenylyltransferase OS=Shigell... [more]
GLGC_SHIDS6.005e-3242.69Glucose-1-phosphate adenylyltransferase OS=Shigell... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
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