EY659881

Overview
NameEY659881
Unique NameEY659881
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3535 contig Csv1_Contig3535:1..854. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ECO24 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.005e-32
Identity = 73/171 (42.69%), Postives = 103/171 (60.23%), Query Frame = 1
Query:  307 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +    +++LAGDH+Y+ DY R +  H E  A  TV  +P+
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPV 170          

HSP 2 Score: 25.0238 bits (53), Expect = 6.005e-32
Identity = 8/19 (42.11%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            +AFG+M +DE  +++ F+E
Sbjct:  176 SAFGVMAVDENDKIIEFVE 194          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_METFK (Glucose-1-phosphate adenylyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=glgC PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 7.821e-32
Identity = 66/154 (42.86%), Postives = 102/154 (66.23%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +++ + +IL GG G+RL  LT   AKPAVP G  +R+ID P+SNC+NS + +I V+TQ+ + +L +H+ R +    G +    FVE+L AQQ  ++  W++GTADAV Q L +  + N+  +L+LAGDH+Y+MDY + + AH    AD+TV  +
Sbjct:   16 TKNTVALILAGGKGSRLRDLTNWTAKPAVPFGGKFRIIDFPLSNCINSGVRRIGVVTQYKAHTLIQHIQRGWGFLRGEFNE--FVELLPAQQRIQE-EWYKGTADAVFQNLDILRQTNIEFVLILAGDHVYKMDYGQMLAAHVRNKADMTVACI 166          

HSP 2 Score: 25.409 bits (54), Expect = 7.821e-32
Identity = 10/22 (45.45%), Postives = 16/22 (72.73%), Query Frame = 3
Query:  825 KRPTAFGLMKIDEEGRLLNFLE 890
            K  +AFG+M +DE  R+++F E
Sbjct:  171 KEASAFGVMGVDENDRVVDFEE 192          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ROSDO (Glucose-1-phosphate adenylyltransferase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=glgC PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.327e-31
Identity = 67/154 (43.51%), Postives = 97/154 (62.99%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            ++  +  +L GG G+RLY LT +RAKPA+  G   R+ID P+SN +NS I +I V TQ+ + SL RHL R + S     +NE  +++L A Q   D NW++GTADAV Q   + E +    I++LAGDH+Y+ DY   I+ H E+ AD+TV  +
Sbjct:    9 AQQTMAFVLAGGRGSRLYELTDRRAKPAMYFGGKSRIIDFPLSNAVNSGIRRIGVATQYKAHSLIRHLQRGW-SFFRAERNES-LDILPASQQMNDENWYKGTADAVAQNKDIIEGYGPKYIIILAGDHIYKQDYAEMIRHHVESGADVTVGCI 160          

HSP 2 Score: 28.1054 bits (61), Expect = 1.327e-31
Identity = 10/19 (52.63%), Postives = 16/19 (84.21%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            + FG+MK+D E R+L+F+E
Sbjct:  168 SGFGVMKVDTEDRILDFIE 186          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SHESR (Glucose-1-phosphate adenylyltransferase OS=Shewanella sp. (strain MR-7) GN=glgC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.727e-31
Identity = 71/156 (45.51%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R    +IL GG G+RL+ LT  RAKPA+  G  +R+ID P+SNC+NS I ++ V+TQ+ S SL RH+ R +    G +K E    VE+L A Q   + NW+QGTADAV Q + +        ++VL+GDH+YRMDY   + AH E+ AD+TV  L
Sbjct:   11 TRETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGW----GHFKKELGESVEILPASQRYSE-NWYQGTADAVFQNIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCL 161          

HSP 2 Score: 27.335 bits (59), Expect = 1.727e-31
Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 3
Query:  837 AFGLMKIDEEGRLLNFLENQK 899
            AFG+M++D+E R+L F E  K
Sbjct:  171 AFGVMEVDDEMRILGFEEKPK 191          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SHESM (Glucose-1-phosphate adenylyltransferase OS=Shewanella sp. (strain MR-4) GN=glgC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.727e-31
Identity = 71/156 (45.51%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R    +IL GG G+RL+ LT  RAKPA+  G  +R+ID P+SNC+NS I ++ V+TQ+ S SL RH+ R +    G +K E    VE+L A Q   + NW+QGTADAV Q + +        ++VL+GDH+YRMDY   + AH E+ AD+TV  L
Sbjct:   11 TRETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGW----GHFKKELGESVEILPASQRYSE-NWYQGTADAVFQNIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCL 161          

HSP 2 Score: 27.335 bits (59), Expect = 1.727e-31
Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 3
Query:  837 AFGLMKIDEEGRLLNFLENQK 899
            AFG+M++D+E R+L F E  K
Sbjct:  171 AFGVMEVDDEMRILGFEEKPK 191          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_SHESA (Glucose-1-phosphate adenylyltransferase OS=Shewanella sp. (strain ANA-3) GN=glgC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.727e-31
Identity = 71/156 (45.51%), Postives = 99/156 (63.46%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNE--GFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R    +IL GG G+RL+ LT  RAKPA+  G  +R+ID P+SNC+NS I ++ V+TQ+ S SL RH+ R +    G +K E    VE+L A Q   + NW+QGTADAV Q + +        ++VL+GDH+YRMDY   + AH E+ AD+TV  L
Sbjct:   11 TRETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGW----GHFKKELGESVEILPASQRYSE-NWYQGTADAVFQNIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCL 161          

HSP 2 Score: 27.335 bits (59), Expect = 1.727e-31
Identity = 11/21 (52.38%), Postives = 16/21 (76.19%), Query Frame = 3
Query:  837 AFGLMKIDEEGRLLNFLENQK 899
            AFG+M++D+E R+L F E  K
Sbjct:  171 AFGVMEVDDEMRILGFEEKPK 191          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ESCF3 (Glucose-1-phosphate adenylyltransferase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=glgC PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.249e-31
Identity = 72/167 (43.11%), Postives = 101/167 (60.48%), Query Frame = 1
Query:  319 KNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I +I V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +    +++LAGDH+Y+ DY R +  H E  A  TV  +P+
Sbjct:    6 KNDPLMLARQLPIKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRIGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKGARCTVACMPV 170          

HSP 2 Score: 24.2534 bits (51), Expect = 2.249e-31
Identity = 7/19 (36.84%), Postives = 16/19 (84.21%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            +AFG+M +D++ +++ F+E
Sbjct:  176 SAFGVMAVDQDEKIIEFVE 194          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_ECO27 (Glucose-1-phosphate adenylyltransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=glgC PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.249e-31
Identity = 72/171 (42.11%), Postives = 102/171 (59.65%), Query Frame = 1
Query:  307 VSDSKNSQTCLDPEASRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPM 819
            VS  KN    L  +     + +IL GG GTRL  LT KRAKPAV  G  +R+ID  +SNC+NS I ++ V+TQ+ S +L +H+ R + S      NE FV++L AQQ  +  NW++GTADAV Q L +   +    +++LAGDH+Y+ DY   +  H E  A  TV  +P+
Sbjct:    2 VSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPAVHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGW-SFFNEEMNE-FVDLLPAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSHMLIDHVEKGARCTVACMPV 170          

HSP 2 Score: 25.0238 bits (53), Expect = 2.249e-31
Identity = 8/19 (42.11%), Postives = 15/19 (78.95%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            +AFG+M +DE  +++ F+E
Sbjct:  176 SAFGVMAVDENDKIIEFVE 194          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_FRAP2 (Glucose-1-phosphate adenylyltransferase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=glgC PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.249e-31
Identity = 65/158 (41.14%), Postives = 102/158 (64.56%), Query Frame = 1
Query:  355 RSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXALPMDEK 828
            +  + ++L GG G+RLY LT  RAKPAV  G  +R++D  +SNCLNS I +I V+TQ+ S SL RH+ R +   + G  NE F+++L AQQ  ++ +W++GTADAV Q + +   +    ++VLAGDH+Y+MDY   ++ H ++    TV  + + E+
Sbjct:   12 KKAMALVLAGGRGSRLYNLTDTRAKPAVYFGGKFRIVDFALSNCLNSGIRRIGVVTQYKSHSLLRHIQRGWGF-LRGELNE-FIDLLPAQQRVDEESWYRGTADAVYQNIDILRSYGPEYVIVLAGDHIYKMDYSVMLRDHAQSGYKCTVGCVEIAEE 167          

HSP 2 Score: 26.9498 bits (58), Expect = 2.249e-31
Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 3
Query:  837 AFGLMKIDEEGRLLNFLENQKE 902
            AFG+M IDE+ ++ +F+E  K+
Sbjct:  171 AFGIMGIDEDRKITSFIEKPKK 192          
BLAST of EY659881 vs. ExPASy Swiss-Prot
Match: GLGC_RHISN (Glucose-1-phosphate adenylyltransferase OS=Rhizobium sp. (strain NGR234) GN=glgC PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.250e-31
Identity = 68/154 (44.16%), Postives = 99/154 (64.29%), Query Frame = 1
Query:  352 SRSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPEDPNWFQGTADAVRQYLWLFEEHNVLGILVLAGDHLYRMDYERFIQAHRETDADITVXAL 813
            +R  +  +L GG G+RL  LT +RAKPAV  G   R+ID  +SN LNS I +I V TQ+ + SL RHL R + +     +NE F ++L A Q   +  W++GTADAV Q + + E+H V  +++LAGDH+Y+MDYE  +Q H ++ AD+T+  L
Sbjct:   10 ARDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRGW-NFFRPERNESF-DILPASQRVSETQWYEGTADAVFQNIDIIEDHGVEYMVILAGDHIYKMDYELMLQQHVDSGADVTIGCL 161          

HSP 2 Score: 25.409 bits (54), Expect = 2.250e-31
Identity = 9/19 (47.37%), Postives = 14/19 (73.68%), Query Frame = 3
Query:  834 TAFGLMKIDEEGRLLNFLE 890
            T FG+M +D E R++ F+E
Sbjct:  169 TGFGVMHVDNEDRIIAFVE 187          
The following BLAST results are available for this feature:
BLAST of EY659881 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 307
Match NameE-valueIdentityDescription
GLGC_ECO246.005e-3242.69Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_METFK7.821e-3242.86Glucose-1-phosphate adenylyltransferase OS=Methylo... [more]
GLGC_ROSDO1.327e-3143.51Glucose-1-phosphate adenylyltransferase OS=Roseoba... [more]
GLGC_SHESR1.727e-3145.51Glucose-1-phosphate adenylyltransferase OS=Shewane... [more]
GLGC_SHESM1.727e-3145.51Glucose-1-phosphate adenylyltransferase OS=Shewane... [more]
GLGC_SHESA1.727e-3145.51Glucose-1-phosphate adenylyltransferase OS=Shewane... [more]
GLGC_ESCF32.249e-3143.11Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_ECO272.249e-3142.11Glucose-1-phosphate adenylyltransferase OS=Escheri... [more]
GLGC_FRAP22.249e-3141.14Glucose-1-phosphate adenylyltransferase OS=Francis... [more]
GLGC_RHISN2.250e-3144.16Glucose-1-phosphate adenylyltransferase OS=Rhizobi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659881 ID=EY659881; Name=EY659881; organism=Citrus sinensis; type=EST; length=925bp
CAACAACACAGGCGTCCGACTCTCACTTTACANAATAACTCAGGCTCAGC
TCGCTTAACGATTACTGTTAACGTTAACAGATTGTACTCATTAATGGCGA
GTATGGCGTCGATCGGATCGCTCAAAGTTCCGTCATCTCCGTCAACTGCA
GCAACGTCGTCTAACTCCAACAATCACAGCCGCAGGAGTGTGGTTAAACG
ACTGGCGTTCTCGTCGTCTCAGCTCTCCGGTGACAAGATTTTTTCTAAAG
CTGTCACCGGTGATCGGCGAAGGGAGAGGCGTCCGATCGTTGTGTCTCCT
CAAGCGGTGTCGGATTCGAAAAATTCTCAGACTTGCCTTGATCCTGAAGC
CAGTCGAAGTGTTTTGGGGATTATACTTGGAGGTGGAGCAGGGACTCGCT
TGTATCCACTTACGAAGAAGAGGGCAAAGCCTGCTGTTCCATTGGGAGCT
AATTACAGGCTGATTGATATTCCTGTGAGCAATTGTTTGAATAGTAACAT
TTCAAAGATCTATGTTCTCACTCAGTTCAATTCTGCGTCCCTGAATCGTC
ACCTATCGAGGGCGTATGCTAGCAACATGGGTGGTTACAAGAACGAAGGA
TTTGTTGAAGTTCTTGCTGCACAGCAGAGTCCAGAAGATCCCAATTGGTT
TCAGGGTACAGCTGATGCTGTGAGGCAGTATTTGTGGCTGTTTGAGGAGC
ACAATGTTCTGGGAATTCTCGTTCTTGCTGGTGATCATTTGTACCGAATG
GACTATGAGAGATTTATTCAGGCACACAGAGAAACTGATGCGGATATCAC
AGTANCTGCCCTGCCCATGGATGAAAAAGGCCTACTGCTTTTGGNCTGAT
GAAAATCGATGAAGAGGGACGCCTATTGAATTTTCTGGAGAACCAAAAGG
AGACACTTTAAGGTATGAAGGGTGA
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