EY659878

Overview
NameEY659878
Unique NameEY659878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.544e-56
Identity = 105/193 (54.40%), Postives = 134/193 (69.43%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTEN--VRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAP----FPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC--PVPGPANCASNPGNWWEANNYQALTAMEA*RY*WVR 568
            +++KL    SAG VTA+YM S       RDE+DFEFLGNRTGQPY +QTN+Y NG G+RE R +LWFDP  DYH Y+ILWN+H +VF+VD VPIRVYKNS + P    FP  +PM ++S++W ADDWATRGGLEK DW KAPF + Y+DF +EGC    P PA  ++   NWW+  +   L+  +   Y WV+
Sbjct:   72 MKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEKTDWKKAPFVSSYKDFAVEGCRWKDPFPACVSTTTENWWDQYDAWHLSKTQKMDYAWVQ 264          

HSP 2 Score: 22.3274 bits (46), Expect = 2.544e-56
Identity = 7/16 (43.75%), Postives = 10/16 (62.50%), Query Frame = 1
Query:  577 MIYDYCTG*SRYPVPP 624
            ++YDYC    R+P  P
Sbjct:  268 VVYDYCKDSERFPTLP 283          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.767e-55
Identity = 102/189 (53.97%), Postives = 132/189 (69.84%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEA*RY*WVRL 571
            + IKL    +AG VTAFY++S T N  DE+DFEFLGNRTGQP  +QTN++  GKG+REQR+ LWFDP+  YH Y+ILWN + IVF+VD++PIR +KN+      FP NQPM +YS+LW ADDWATRGGLEK +W+ APF A Y+ F I+GC     A  CA+    WW+   ++ L A +  R  WVR+
Sbjct:   82 MHIKLPAGDTAGVVTAFYLSS-TNNEHDEIDFEFLGNRTGQPAILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSILWNMYQIVFFVDNIPIRTFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFVASYKGFHIDGCQASVEAKYCATQGRMWWDQKEFRDLDAEQWRRLKWVRM 269          

HSP 2 Score: 25.0238 bits (53), Expect = 2.767e-55
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 1
Query:  580 IYDYCTG*SRYPVPP 624
            IY+YCT  +R+PV P
Sbjct:  273 IYNYCTDRTRFPVMP 287          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 7.001e-52
Identity = 100/193 (51.81%), Postives = 128/193 (66.32%), Query Frame = 2
Query:    5 KRRVRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGP---ANCASNPGNWWEANNYQALTAMEA*RY*WVR 568
            K  ++IKL    SAGTVTAFYM+S+  N  +E DFEFLGN TG+PY VQTNIY NG G+REQR+NLWFDP  ++H Y+ILW+   +VF VD+ PIRV KN      PF  +Q MGVYS++W ADDWAT+GGL K DWS APF A Y++F I+ C +P     + C  +   WW+      L+  +  +  WVR
Sbjct:   71 KVSIQIKLVEGDSAGTVTAFYMSSDGPN-HNEFDFEFLGNTTGEPYIVQTNIYVNGVGNREQRLNLWFDPTTEFHTYSILWSKRSVVFMVDETPIRVQKNLEEKGIPFAKDQAMGVYSSIWNADDWATQGGLVKTDWSHAPFVASYKEFQIDACEIPTTTDLSKCNGDQKFWWDEPTVSELSLHQNHQLIWVR 262          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 2.275e-51
Identity = 93/168 (55.36%), Postives = 119/168 (70.83%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC-PVPGPANCASNPGNWW 508
            +++KL P  SAGTVTA+Y+ S  +   DE+DFEFLGN TG PYT+ TN+Y  GKGDREQ+ +LWFDP AD+H Y++LWN HHIVF VDD+P+R +KN       +P  QPM +YS+LW AD WATRGGL K DWSKAPF A YR+F  + C    G ++C +    W+
Sbjct:   77 MQLKLVPGNSAGTVTAYYLKSKGDTW-DEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTASYRNFRADACVSSGGRSSCPAGSPRWF 243          

HSP 2 Score: 24.2534 bits (51), Expect = 2.275e-51
Identity = 9/19 (47.37%), Postives = 13/19 (68.42%), Query Frame = 1
Query:  574 HMIYDYCTG*SRYPVPPPR 630
            +MIY+YCT   R+P   P+
Sbjct:  262 YMIYNYCTDTKRFPQGFPK 280          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH10_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 10 OS=Arabidopsis thaliana GN=XTH10 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 2.964e-51
Identity = 95/189 (50.26%), Postives = 127/189 (67.20%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPG--NWWEANNYQALTAMEA*RY*WVR 568
            ++IKL    S GTV A+YM+S+  N RDE+DFEFLGN  GQPY +QTN+YA G  +RE+R++LWFDPA D+H Y+ILWN H IVF VD +PIR+Y+N G     +P  QPM V ++LW  + WATRGG +KIDWSK PF A + D+ I+ C   G  +  +     NWW  N + +LT ++   + WVR
Sbjct:   84 MKIKLIRGSSQGTVVAYYMSSDQPN-RDEIDFEFLGNVNGQPYILQTNVYAEGLDNREERIHLWFDPAKDFHTYSILWNIHQIVFMVDQIPIRLYRNHGEKGVAYPRLQPMSVQASLWNGESWATRGGHDKIDWSKGPFVASFGDYKIDACIWIGNTSFCNGESTENWWNKNEFSSLTRVQKRWFKWVR 271          

HSP 2 Score: 22.7126 bits (47), Expect = 2.964e-51
Identity = 7/14 (50.00%), Postives = 10/14 (71.43%), Query Frame = 1
Query:  571 HHMIYDYCTG*SRY 612
            +H+IYDYC    R+
Sbjct:  273 YHLIYDYCQDYGRF 286          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH19_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 19 OS=Arabidopsis thaliana GN=XTH19 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 8.565e-51
Identity = 93/166 (56.02%), Postives = 118/166 (71.08%), Query Frame = 2
Query:    5 KRRVRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASN 493
            K  V++KL P  SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP A++H Y I WN   I+F VD +PIR + N  S   PFP  QPM +Y++LWEA+ WATRGGLEK DWSKAPF AYYR++++EGC  V G + C +N
Sbjct:   69 KAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGSGDKEQQFHLWFDPTANFHTYCITWNPQRIIFTVDGIPIREFMNAESRGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAYYRNYNVEGCVWVNGKSVCPAN 233          

HSP 2 Score: 25.409 bits (54), Expect = 8.565e-51
Identity = 11/31 (35.48%), Postives = 19/31 (61.29%), Query Frame = 1
Query:  538 HGSMKILMGSSHHMIYDYCTG*SRYP--VPP 624
            +G  ++    S +M+Y+YC+   R+P  VPP
Sbjct:  244 NGQTRMKGVQSKYMVYNYCSDKKRFPRGVPP 274          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH16_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS=Arabidopsis thaliana GN=XTH16 PE=2 SV=2)

HSP 1 Score: 195.667 bits (496), Expect = 2.471e-50
Identity = 88/153 (57.52%), Postives = 114/153 (74.51%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV 466
            +++KL    SAGTVTA+Y++S      DE+DFEFLGN TG+PY + TN++A GKG+REQ+  LWFDP  ++H Y+++W   HI+F VD+VPIRV+ N+ +   PFP NQPM +YS+LW ADDWATRGGL K DWSKAPF AYYR F+   C V
Sbjct:   74 MQLKLVAGNSAGTVTAYYLSSEGPT-HDEIDFEFLGNETGKPYVLHTNVFAQGKGNREQQFYLWFDPTKNFHTYSLVWRPQHIIFMVDNVPIRVFNNAEQLGVPFPKNQPMKIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAACTV 225          

HSP 2 Score: 25.409 bits (54), Expect = 2.471e-50
Identity = 9/26 (34.62%), Postives = 15/26 (57.69%), Query Frame = 1
Query:  538 HGSMKILMGSSHHMIYDYCTG*SRYP 615
            +G  ++     + MIYDYC+   R+P
Sbjct:  254 YGRRRLRWVQKYFMIYDYCSDLKRFP 279          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.472e-50
Identity = 89/171 (52.05%), Postives = 123/171 (71.93%), Query Frame = 2
Query:    5 KRRVRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASNPGNWW 508
            K  V++KL P  SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP  D+H Y I+WN   ++F +D +PIR +KNS     PFP +QPM +Y++LWEA+ WATRGGLEK DWSKAPF A+YR+++++ C    G ++C++N  +W+
Sbjct:   74 KVEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDACVWSNGKSSCSAN-SSWF 242          

HSP 2 Score: 25.7942 bits (55), Expect = 2.472e-50
Identity = 9/29 (31.03%), Postives = 15/29 (51.72%), Query Frame = 1
Query:  541 GSMKILMGSSHHMIYDYCTG*SRYPVPPP 627
            G  ++      +M+Y+YCT   R+P   P
Sbjct:  250 GKNRVKWAQRKYMVYNYCTDKKRFPQGAP 278          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH18_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 18 OS=Arabidopsis thaliana GN=XTH18 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.200e-50
Identity = 92/171 (53.80%), Postives = 121/171 (70.76%), Query Frame = 2
Query:    5 KRRVRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASNPGNWW 508
            K  V++KL P  SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP  ++H Y I WN   I+F VD +PIR +KNS     PFP  QPM +Y++LWEA+ WATRGGLEK DWSKAPF A+YR++++EGC    G ++C +N  +W+
Sbjct:   74 KAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNLSGHPYTLHTNVYTKGSGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNSESIGVPFPTKQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVEGCVWANGKSSCPAN-SSWF 242          

HSP 2 Score: 22.7126 bits (47), Expect = 4.200e-50
Identity = 8/26 (30.77%), Postives = 15/26 (57.69%), Query Frame = 1
Query:  538 HGSMKILMGSSHHMIYDYCTG*SRYP 615
            +G  ++    S +M+Y+YC    R+P
Sbjct:  249 NGQTRMKGVQSKYMVYNYCNDKRRFP 274          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.558e-50
Identity = 97/210 (46.19%), Postives = 130/210 (61.90%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEA*RY*WVRLTT*SMIIALDNHDTQYPHREC 634
            +RIK+    + G VTAFY+ S      DE+DFEFLGN  G+P T+QTN++ NG+G+RE+R  LWF+P   YH Y +LWN + IVFYVD++PIRVYKN     +P ++PM V ++LW  DDWAT GG  K++WS +PF A++RDF + GC + G +N      +   WW A NYQ L+  E   Y  VR    +     D    Q P REC
Sbjct:   82 MRIKVPSGNTGGIVTAFYLTSKGGG-HDEIDFEFLGNNNGKPVTLQTNLFLNGEGNREERFLLWFNPTKHYHTYGLLWNPYQIVFYVDNIPIRVYKNENGVSYP-SKPMQVEASLWNGDDWATDGGRTKVNWSYSPFIAHFRDFALSGCNIDGRSNNVGACESSNYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRSKYQTPPREC 289          
The following BLAST results are available for this feature:
BLAST of EY659878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH8_ARATH2.544e-5654.40Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH4_ARATH2.767e-5553.97Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH9_ARATH7.001e-5251.81Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH25_ARATH2.275e-5155.36Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH10_ARATH2.964e-5150.26Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH19_ARATH8.565e-5156.02Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH16_ARATH2.471e-5057.52Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH2.472e-5052.05Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH18_ARATH4.200e-5053.80Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH3_ARATH8.558e-5046.19Xyloglucan endotransglucosylase/hydrolase protein ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659878 ID=EY659878; Name=EY659878; organism=Citrus sinensis; type=EST; length=932bp
TCCTAAAAGACGCGTCCGGATCAAGCTCTGCCCCTGAAGATCTGCTGGAA
CTGTCACTGCATTTTATATGAATTCCAACACCGAAAATGTCCGAGACGAG
CTTGATTTTGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACACGGTCCA
GACCAATATCTATGCAAATGGAAAAGGCGATAGAGAACAGAGAGTGAACC
TCTGGTTTGACCCTGCTGCAGATTATCACCTTTACACTATTCTCTGGAAC
CATCACCATATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTTACAA
AAACAGTGGAAGGGCTCCATTTCCAATGAACCAACCCATGGGGGTGTATT
CGACGCTGTGGGAAGCAGATGACTGGGCAACAAGAGGTGGTCTAGAGAAA
ATAGATTGGAGCAAAGCTCCTTTTTATGCTTATTACAGAGACTTTGATAT
TGAGGGCTGCCCAGTTCCTGGACCAGCAAACTGTGCCTCGAACCCAGGTA
ACTGGTGGGAGGCTAATAATTATCAAGCCCTCACCGCCATGGAAGCATGA
AGATACTGATGGGTTCGTCTCACCACATGATCTATGATTATTGCACTGGA
TAATCACGATACCCAGTACCCCCACCGAGAATGCTTGCCGGGATATCAAT
TCGACCGTCGATTAATTCAGCAGATGGACGGTAGCTCATATCCGGATGCT
ATCATGCATATTACTTCACGTACACGTCCTTTGGAGTCATCCTATTCAGG
GGAAAGACTTTACGCATATCCAGGGAAGGGCAGGAGGAAAATAAACAGTG
TGGGCTTTTAATGCAATATTGGAGTGGAAAAATGTGGGAATTCGATCCCT
TCGTCAAAATAAGCCGGATTTCCGCCCAGATCCGGGCAAATAAAACCGTT
CTATTGGGATAACCAAATGGGTCAAAAAAAGG
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