EY659878

Overview
NameEY659878
Unique NameEY659878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 9.300e-50
Identity = 89/166 (53.61%), Postives = 118/166 (71.08%), Query Frame = 2
Query:    5 KRRVRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP-VPGPANCASN 493
            K  V++KL P  SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP  ++H Y I WN   I+F VD +PIR +KN      PFP  QPM +Y++LWEA+ WATRGGLEK DWSKAPF A+YR+++++GC    G ++C++N
Sbjct:   74 KAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRNYNVDGCVWANGKSSCSAN 238          

HSP 2 Score: 25.0238 bits (53), Expect = 9.300e-50
Identity = 10/26 (38.46%), Postives = 16/26 (61.54%), Query Frame = 1
Query:  538 HGSMKILMGSSHHMIYDYCTG*SRYP 615
            +G  ++    S +MIY+YCT   R+P
Sbjct:  249 NGQTRMKGVQSKYMIYNYCTDKRRFP 274          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH15_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS=Arabidopsis thaliana GN=XTH15 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 2.059e-49
Identity = 87/151 (57.62%), Postives = 113/151 (74.83%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC 460
            +++KL    SAGTVTA+Y++S      DE+DFEFLGN TG+PY + TN++A GKGDREQ+  LWFDP  ++H Y+I+W   HI+F VD++PIRV+ N+ +   PFP +QPM +YS+LW ADDWATRGGL K DWSKAPF AYYR F+   C
Sbjct:   75 MQLKLVAGNSAGTVTAYYLSSQGAT-HDEIDFEFLGNETGKPYVLHTNVFAQGKGDREQQFYLWFDPTKNFHTYSIVWRPQHIIFLVDNLPIRVFNNAEKLGVPFPKSQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRGFNAAAC 224          

HSP 2 Score: 23.483 bits (49), Expect = 2.059e-49
Identity = 8/26 (30.77%), Postives = 15/26 (57.69%), Query Frame = 1
Query:  538 HGSMKILMGSSHHMIYDYCTG*SRYP 615
            +G  ++     + MIY+YC+   R+P
Sbjct:  252 YGRRRLRWVQKYFMIYNYCSDLKRFP 277          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 5.943e-49
Identity = 93/176 (52.84%), Postives = 118/176 (67.05%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDF-DIEGCPVPGPA---NCASNPGNW-WEANN 520
            +++KL    SAGTVTA+Y++S      DE+DFEFLGNRTG PYT+ TN++  GKGDRE +  LWFDP AD+H YT+ WN  +I+F VD +PIRV+KN+ +    +P NQPM +YS+LWEADDWAT GG  KIDWS APF A YR+F D   C     +    C  N  +W W   N
Sbjct:   77 MKLKLVAGNSAGTVTAYYLSSKG-TAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKIDWSNAPFKASYRNFNDQSSCSRTSSSKWVTCEPNSNSWMWTTLN 251          

HSP 2 Score: 25.0238 bits (53), Expect = 5.943e-49
Identity = 12/35 (34.29%), Postives = 20/35 (57.14%), Query Frame = 1
Query:  526 SPHRHGSMKILMGSSHHMIYDYCTG*SRYPVPPPR 630
            +P ++G  K++      MIY+YCT   R+P   P+
Sbjct:  251 NPAQYG--KMMWVQRDFMIYNYCTDFKRFPQGLPK 283          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.316e-48
Identity = 97/192 (50.52%), Postives = 123/192 (64.06%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPV-PGPANCAS-----NPGNW--------------WEANNY 523
            ++IKL    SAGTVTA+Y+ S   +  DE+DFEFLGN +G PYT+ TN++  GKGDREQ+  LWFDP +D+H Y+ILWN   I+F VD  PIR +KN  S    FP NQPM +YS+LW A++WATRGGL K DWSKAPF A YR F+ E C V  G ++C +     + G+W              W  NNY
Sbjct:   73 MQIKLVAGNSAGTVTAYYLKS-PGSTWDEIDFEFLGNLSGDPYTLHTNVFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYRGFNEEACVVINGQSSCPNVSGQGSTGSWLSQELDSTGQEQMRWVQNNY 263          

HSP 2 Score: 26.5646 bits (57), Expect = 1.316e-48
Identity = 10/21 (47.62%), Postives = 15/21 (71.43%), Query Frame = 1
Query:  568 SHHMIYDYCTG*SRYPVPPPR 630
            +++MIY+YCT   R+P   PR
Sbjct:  261 NNYMIYNYCTDAKRFPQGLPR 281          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 1.715e-48
Identity = 94/180 (52.22%), Postives = 122/180 (67.78%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDF-DIEGCPVPGPAN---CASNPGNW-WEANNYQAL 532
            ++IKL P  SAGTVTA+Y++S  E   DE+DFEFLGN TGQPY + TN++  GKG+RE +  LWFDP AD+H YT+LWN  +I+F VD +PIRV+KN  +    +P +QPM +YS+LWEADDWAT+GG  K DW+ APF A YR F D++ C      N   C +N  +W W   N   L
Sbjct:   74 MKIKLVPGNSAGTVTAYYLSSKGETW-DEIDFEFLGNVTGQPYVIHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYRSFNDVDCCSRTSIWNWVTCNANSNSWMWTTLNSNQL 252          

HSP 2 Score: 23.8682 bits (50), Expect = 1.715e-48
Identity = 8/14 (57.14%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  574 HMIYDYCTG*SRYP 615
            +MIY+YCT   R+P
Sbjct:  262 YMIYNYCTDFKRFP 275          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 3.797e-48
Identity = 91/183 (49.73%), Postives = 123/183 (67.21%), Query Frame = 2
Query:   11 RVRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRA--PFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGN---WWEANNYQALTAME 544
            ++RIKL P  SAG VTAFY+ S  +   DE+DFEFLGNR G+P  +QTN+++NG+G REQ+   WFDP   +H Y ILWN + IVFYVD VPIRV+KN  ++   +P ++PM + ++LW  ++WAT GG EKI+W+ APF A Y+ F   GC V G +N A+  G+   WW    Y  L+A E
Sbjct:   78 QMRIKLPPRDSAGVVTAFYLTSKGDT-HDEVDFEFLGNRQGKPIAIQTNVFSNGQGGREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYP-SKPMQLVASLWNGENWATSGGKEKINWAYAPFKAQYQGFSDHGCHVNGQSNNANVCGSTRYWWNTRTYSQLSANE 258          

HSP 2 Score: 30.4166 bits (67), Expect = 3.797e-48
Identity = 11/17 (64.71%), Postives = 13/17 (76.47%), Query Frame = 1
Query:  574 HMIYDYCTG*SRYPVPP 624
            +M YDYC+   RYPVPP
Sbjct:  269 YMTYDYCSDRPRYPVPP 285          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.951e-48
Identity = 93/176 (52.84%), Postives = 114/176 (64.77%), Query Frame = 2
Query:    5 KRRVRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGC-------PVPGPANCASNPGNW 505
            K  +++KL P  SAGTVT  Y+ S      DE+DFEFLGN +G+PYT+ TN+Y  GKGD+EQ+  LWFDP A++H YTILWN   I+F VD  PIR +KN  S    FP N+PM +YS+LW ADDWATRGGL K DWSKAPF A YR F  E C         P  +   +  G+W
Sbjct:   67 KVSMQMKLVPGNSAGTVTTLYLKS-PGTTWDEIDFEFLGNSSGEPYTLHTNVYTQGKGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYRGFQQEACVWSNGKSSCPNASKQGTTTGSW 241          

HSP 2 Score: 25.0238 bits (53), Expect = 4.951e-48
Identity = 9/20 (45.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  571 HHMIYDYCTG*SRYPVPPPR 630
            ++MIY+YCT   R+P   P+
Sbjct:  260 NYMIYNYCTDAKRFPQGLPK 279          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.096e-47
Identity = 95/175 (54.29%), Postives = 120/175 (68.57%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFD-IEGCPVPGPANCASNPGNWWEANNYQA 529
            +++KL    SAGTVTA+Y++S      DE+DFEFLGN +G PY + TNI+  GKG+REQ+  LWFDP  ++H Y+I+W   HI+F VD+ PIRV+KN+     PFP NQPM +YS+LW ADDWATRGGL K DWSKAPF AYYR+F  IE        +  SN G  +EAN   A
Sbjct:   79 MQLKLVAGNSAGTVTAYYLSSQGPT-HDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRNFKAIEF----SSKSSISNSGAEYEANELDA 248          

HSP 2 Score: 21.9422 bits (45), Expect = 1.096e-47
Identity = 7/15 (46.67%), Postives = 11/15 (73.33%), Query Frame = 1
Query:  571 HHMIYDYCTG*SRYP 615
            + MIY+YC+   R+P
Sbjct:  260 YFMIYNYCSDLKRFP 274          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.097e-47
Identity = 88/152 (57.89%), Postives = 110/152 (72.37%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCP 463
            ++IKL P  SAGTVT FY+ S   +  DE+DFEFLGN +G PYT+ TN+Y  GKGD+EQ+ +LWFDP A++H Y+ILWN   I+  VDD PIR +KN  S    FP N+PM +Y++LW ADDWATRGGL K DWSKAPF A YR+  I+  P
Sbjct:   71 MQIKLVPGNSAGTVTTFYLKSEG-STWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFMASYRNIKIDSKP 221          

HSP 2 Score: 25.409 bits (54), Expect = 1.097e-47
Identity = 9/20 (45.00%), Postives = 14/20 (70.00%), Query Frame = 1
Query:  571 HHMIYDYCTG*SRYPVPPPR 630
            ++MIY+YCT   R+P   P+
Sbjct:  244 NYMIYNYCTDHRRFPQGAPK 263          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.163e-47
Identity = 90/176 (51.14%), Postives = 120/176 (68.18%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDF-DIEGCPVPGPAN---CASNPGNW-WEANN 520
            +++KL    SAGTVTA+Y++S  E   DE+DFEFLGN TGQPY + TN++  GKG+RE +  LWFDP AD+H YT+LWN  +I+F VD +PIRV+KN  +    +P +QPM +YS+LWEADDWAT+GG  K DW+ APF A Y+ F D++ C      N   C +N  +W W   N
Sbjct:   73 MKMKLVAGNSAGTVTAYYLSSKGETW-DEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYKSFNDVDCCSRTSLLNWVTCNANSNSWMWTTLN 247          

HSP 2 Score: 25.409 bits (54), Expect = 3.163e-47
Identity = 11/28 (39.29%), Postives = 18/28 (64.29%), Query Frame = 1
Query:  532 HRHGSMKILMGSSHHMIYDYCTG*SRYP 615
            +++G MK +     +MIY+YCT   R+P
Sbjct:  249 NQYGQMKWVQDD--YMIYNYCTDFKRFP 274          
The following BLAST results are available for this feature:
BLAST of EY659878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH17_ARATH9.300e-5053.61Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH15_ARATH2.059e-4957.62Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH14_ARATH5.943e-4952.84Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH23_ARATH1.316e-4850.52Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH12_ARATH1.715e-4852.22Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH2_ARATH3.797e-4849.73Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH22_ARATH4.951e-4852.84Xyloglucan endotransglucosylase/hydrolase protein ... [more]
BRU1_SOYBN1.096e-4754.29Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH24_ARATH1.097e-4757.89Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH13_ARATH3.163e-4751.14Putative xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659878 ID=EY659878; Name=EY659878; organism=Citrus sinensis; type=EST; length=932bp
TCCTAAAAGACGCGTCCGGATCAAGCTCTGCCCCTGAAGATCTGCTGGAA
CTGTCACTGCATTTTATATGAATTCCAACACCGAAAATGTCCGAGACGAG
CTTGATTTTGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACACGGTCCA
GACCAATATCTATGCAAATGGAAAAGGCGATAGAGAACAGAGAGTGAACC
TCTGGTTTGACCCTGCTGCAGATTATCACCTTTACACTATTCTCTGGAAC
CATCACCATATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTTACAA
AAACAGTGGAAGGGCTCCATTTCCAATGAACCAACCCATGGGGGTGTATT
CGACGCTGTGGGAAGCAGATGACTGGGCAACAAGAGGTGGTCTAGAGAAA
ATAGATTGGAGCAAAGCTCCTTTTTATGCTTATTACAGAGACTTTGATAT
TGAGGGCTGCCCAGTTCCTGGACCAGCAAACTGTGCCTCGAACCCAGGTA
ACTGGTGGGAGGCTAATAATTATCAAGCCCTCACCGCCATGGAAGCATGA
AGATACTGATGGGTTCGTCTCACCACATGATCTATGATTATTGCACTGGA
TAATCACGATACCCAGTACCCCCACCGAGAATGCTTGCCGGGATATCAAT
TCGACCGTCGATTAATTCAGCAGATGGACGGTAGCTCATATCCGGATGCT
ATCATGCATATTACTTCACGTACACGTCCTTTGGAGTCATCCTATTCAGG
GGAAAGACTTTACGCATATCCAGGGAAGGGCAGGAGGAAAATAAACAGTG
TGGGCTTTTAATGCAATATTGGAGTGGAAAAATGTGGGAATTCGATCCCT
TCGTCAAAATAAGCCGGATTTCCGCCCAGATCCGGGCAAATAAAACCGTT
CTATTGGGATAACCAAATGGGTCAAAAAAAGG
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