EY659878
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 8.466e-31 Identity = 66/167 (39.52%), Postives = 100/167 (59.88%), Query Frame = 2 Query: 17 RIKLCP*RSAGTVTAFYMNSNTENV---RDELDFEFLGNRTGQPYTVQTNIYANG--KGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNP 496 R+KL ++G V AFY+ SN E DE+D E LG +T+QTN+YANG + RE++ WFDP +H YT++WN HH VF VD++P+R + N G + +P ++PM +Y T+W+ +WAT+GG +++ APF D ++ GC V ++ S P Sbjct: 89 RLKLPAGFASGVVVAFYL-SNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYP-SKPMSLYVTVWDGSEWATKGGKYPVNYKYAPFVVSVADVELSGCSVNNGSSTGSGP 253 HSP 2 Score: 21.1718 bits (43), Expect = 8.466e-31 Identity = 8/16 (50.00%), Postives = 9/16 (56.25%), Query Frame = 1 Query: 577 MIYDYCTG*SRYPVPP 624 M Y YC+ RY V P Sbjct: 291 MFYSYCSDKPRYKVMP 306
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH11_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 11 OS=Arabidopsis thaliana GN=XTH11 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.216e-25 Identity = 66/167 (39.52%), Postives = 92/167 (55.09%), Query Frame = 2 Query: 14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVP--GPANCASNPGNWW 508 VRIK S G +T+FY+ S + DEL F+ LG + G PY + TN+Y G+G ++QR LWFDP DYH Y+ LWN + +VFYVDD PIRVY + +P Q M + ++ G + ID + P+ A ++ IEGC G C ++P WW Sbjct: 70 VRIKAPQTTSTGVITSFYLISRSSR-HDELCFQILG-KNGPPYLLNTNMYLYGEGGKDQRFRLWFDPTKDYHSYSFLWNPNQLVFYVDDTPIRVYSKNPDVYYPSVQTMFLMGSV-------QNGSI--IDPKQMPYIAKFQASKIEGCKTEFMGIDKC-TDPKFWW 224 HSP 2 Score: 23.0978 bits (48), Expect = 1.216e-25 Identity = 8/17 (47.06%), Postives = 11/17 (64.71%), Query Frame = 1 Query: 574 HMIYDYCTG*SRYPVPP 624 ++ YDYC+ RYP P Sbjct: 244 YLDYDYCSDRQRYPKVP 260
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: GUB_CLOTH (Beta-glucanase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=licB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.691e-11 Identity = 54/168 (32.14%), Postives = 75/168 (44.64%), Query Frame = 2 Query: 14 VRIKLCP*RSAGTVTAF--YMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAPFPMNQPMGVYSTLWE---ADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGN 502 VR+K ++ G V++F Y + N DE+D EFLG T + VQ N Y NG G E NL FD + D+H Y W +I FYVD +VY+ + P P + LW D+W R ++ + YY + + P P P S P N Sbjct: 108 VRMKAA--KNVGIVSSFFTYTGPSDNNPWDEIDIEFLGKDTTK---VQFNWYKNGVGGNEYLHNLGFDASQDFHTYGFEWRPDYIDFYVDGK--KVYRGTRNIPV---TPGKIMMNLWPGIGVDEWLGRYDGRTPLQAEYEYVKYYPNGVPQDNPTPTPTIAPSTPTN 265 The following BLAST results are available for this feature:
BLAST of EY659878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659878 ID=EY659878; Name=EY659878; organism=Citrus sinensis; type=EST; length=932bpback to top |