EY659866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659866 vs. ExPASy Swiss-Prot
Match: RBS_THIDA (Ribulose bisphosphate carboxylase small chain OS=Thiobacillus denitrificans (strain ATCC 25259) GN=cbbS PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.277e-13 Identity = 37/100 (37.00%), Postives = 54/100 (54.00%), Query Frame = 3 Query: 30 FENLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 329 FE SYLP ++ + K++ YL+ GW P +E H+ P + YW MWKLPM+G TD ++L E K P++ VR++G+DN Q Q Sbjct: 19 FETFSYLPAMNAADIRKQVEYLVSKGWNPAIE------------HTEPEHLMDSYWYMWKLPMFGETDIDRILGEAEACHKANPNNHVRLVGYDNFAQSQ 106
BLAST of EY659866 vs. ExPASy Swiss-Prot
Match: RBS_RHOCA (Ribulose bisphosphate carboxylase small chain OS=Rhodobacter capsulatus GN=cbbS PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 5.367e-12 Identity = 35/109 (32.11%), Postives = 56/109 (51.38%), Query Frame = 3 Query: 3 RKTRVRLEDFENLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQ 329 R +R SYLPP+ + + +++ +++++GW P +E H+ P + YW MWKLPM+G TD +L E+ + P VR+IG+DN Q Q Sbjct: 10 RLSRPESRKMGTFSYLPPMGEAEIRRQVEWIVKNGWNPGIE------------HTEPDFAAQIYWYMWKLPMFGETDVDAILAELKACHEANPGHHVRLIGYDNFTQSQ 106
BLAST of EY659866 vs. ExPASy Swiss-Prot
Match: RBS1_THIFE (Ribulose bisphosphate carboxylase small chain 1 OS=Thiobacillus ferrooxidans GN=cbbS1 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.196e-11 Identity = 35/105 (33.33%), Postives = 53/105 (50.48%), Query Frame = 3 Query: 30 FENLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFL 344 +E SYLP + E + ++I+YL+ GW P +E H P YW MWKLPM+G V+ E+ + +P VR++G+DN Q Q +F+ Sbjct: 13 YETFSYLPAMGPEKMRRQIAYLINQGWNPGIE------------HVEPERASTYYWYMWKLPMFGEQSVDTVIMELEACHRAHPGHHVRLVGYDNYSQSQGSAFV 105
BLAST of EY659866 vs. ExPASy Swiss-Prot
Match: RBS_NITVU (Ribulose bisphosphate carboxylase small chain OS=Nitrobacter vulgaris GN=cbbS PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.543e-11 Identity = 34/108 (31.48%), Postives = 57/108 (52.78%), Query Frame = 3 Query: 21 LEDFENLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFL 344 L+ +E SYLP ++ E + ++I++ + GW P +E EKG + YW MWKLP++G V+ E+ +E+P VR + +DN Q Q ++F+ Sbjct: 9 LKKYETFSYLPQMTPEQVRRQIAHAIAQGWNPAVE-HTEKGTPAK----------ASYWYMWKLPLFGEQSVDAVVAEIEACHREFPDQMVRFVAYDNYAQSQGMAFV 105 The following BLAST results are available for this feature:
BLAST of EY659866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659866 ID=EY659866; Name=EY659866; organism=Citrus sinensis; type=EST; length=926bpback to top |