EY659866
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659866 vs. ExPASy Swiss-Prot
Match: RBS_GOSHI (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Gossypium hirsutum GN=RBCS PE=3 SV=2) HSP 1 Score: 172.17 bits (435), Expect = 3.811e-42 Identity = 77/111 (69.37%), Postives = 93/111 (83.78%), Query Frame = 3 Query: 30 FENLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 362 FE LSYLP L+ L KE+ YLLRS WIPCLEFELE+G+V+R++ S P YYDGRYWTMWKLPM+GCTD+ QVL+E+ +KEYP++F+RIIGFDN RQVQCISF+A KP G Sbjct: 71 FETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVHRKYSSLPTYYDGRYWTMWKLPMFGCTDSAQVLEELENCKKEYPNAFIRIIGFDNVRQVQCISFIAYKPKG 181
BLAST of EY659866 vs. ExPASy Swiss-Prot
Match: RBS_AEGTA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Aegilops tauschii GN=RBCS PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 3.811e-42 Identity = 76/114 (66.67%), Postives = 94/114 (82.46%), Query Frame = 3 Query: 21 LEDFENLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 362 ++ FE LSYLPPLS E LLK++ YL+RS W+PCLEF + G+++REH+ SPGYYDGRYWTMWKLPM+GC TQV+ EV EV+KEYP + RIIGFDN RQVQ +SF+A+KPPG Sbjct: 56 IKKFETLSYLPPLSTEGLLKQVDYLIRSKWVPCLEFR-KVGFIFREHNVSPGYYDGRYWTMWKLPMFGCPAPTQVIPEVEEVRKEYPDPYCRIIGFDNMRQVQSVSFIASKPPG 168
BLAST of EY659866 vs. ExPASy Swiss-Prot
Match: RBS1_PEA (Ribulose bisphosphate carboxylase small chain, chloroplastic (Fragment) OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 6.500e-42 Identity = 77/109 (70.64%), Postives = 89/109 (81.65%), Query Frame = 3 Query: 30 FENLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 356 FE LSYLPPL+ + LLKE+ YLLR GW+PCLEFEL KG+VY EH+ SP YYDGRYWTMWKLPM+G TD QV+KEV EV YP +FVR+IGF+N RQVQCISF+A P Sbjct: 25 FETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELLKGFVYGEHNKSPRYYDGRYWTMWKLPMFGTTDPAQVVKEVDEVVAAYPEAFVRVIGFNNVRQVQCISFIAHTP 133
BLAST of EY659866 vs. ExPASy Swiss-Prot
Match: RBS_MAIZE (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Zea mays GN=RBCS PE=1 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 3.226e-41 Identity = 76/111 (68.47%), Postives = 91/111 (81.98%), Query Frame = 3 Query: 30 FENLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 362 FE LSYLPPLS + LLK++ YLLR+GWIPCLEF + G+VYRE+ +SP YYDGRYWTMWKLPM+GC DATQV KE+ E K YP +F R+IGFDN +Q QC+SF+A KPPG Sbjct: 59 FETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFS-KVGFVYRENSTSPCYYDGRYWTMWKLPMFGCNDATQVYKELQEAIKSYPDAFHRVIGFDNIKQTQCVSFIAYKPPG 168
BLAST of EY659866 vs. ExPASy Swiss-Prot
Match: RBS1_SPIOL (Ribulose bisphosphate carboxylase small chain OS=Spinacia oleracea GN=RBCS PE=1 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.226e-40 Identity = 77/114 (67.54%), Postives = 92/114 (80.70%), Query Frame = 3 Query: 21 LEDFENLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 362 L+ FE LSYLPPL+ E LL E++YLL GWIP LEFE++ G+VYREH SPGYYDGRYWTMWKLPM+G TD QV+ EV EV+K P +FVR IGF++KR+VQCISF+A KP G Sbjct: 9 LKKFETLSYLPPLTTEQLLAEVNYLLVKGWIPPLEFEVKDGFVYREHDKSPGYYDGRYWTMWKLPMFGGTDPAQVVNEVEEVKKAPPDAFVRFIGFNDKREVQCISFIAYKPAG 122
BLAST of EY659866 vs. ExPASy Swiss-Prot
Match: RBS_PINTH (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 3.943e-39 Identity = 71/109 (65.14%), Postives = 90/109 (82.57%), Query Frame = 3 Query: 30 FENLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 356 FE LSYLP L++E L+KE+ YLLR+ W+PCLEF+LE G + R+++ SPGYYDGRYW MWKLPM+GCT+A+QV+ EV E K YP +F+R+IGFDN RQVQCISF+ KP Sbjct: 63 FETLSYLPTLTEEQLVKEVEYLLRNKWVPCLEFDLE-GSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVINEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170
BLAST of EY659866 vs. ExPASy Swiss-Prot
Match: RBS_LARLA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Larix laricina GN=RBCS PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.556e-38 Identity = 71/109 (65.14%), Postives = 88/109 (80.73%), Query Frame = 3 Query: 30 FENLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKP 356 FE LSYLP L+ E L+KE+ YLL++ W+PCLEFE E G + R + +SPGYYDGRYW MWKLPM+GCT+A+QVL EV E K YP++F+R+IGFDN RQVQCISF+ KP Sbjct: 79 FETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFE-EDGEIKRVYGNSPGYYDGRYWVMWKLPMFGCTEASQVLNEVNECAKAYPNAFIRVIGFDNVRQVQCISFIVHKP 186
BLAST of EY659866 vs. ExPASy Swiss-Prot
Match: RBS_SACHY (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Saccharum hybrid GN=RBCS PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 2.645e-35 Identity = 70/111 (63.06%), Postives = 85/111 (76.58%), Query Frame = 3 Query: 30 FENLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPPG 362 FE LSYLPPL+ E LLK++ YLLR+ W+PCLEF E G+VYRE+ +SP YYDGRYWTMWKLPM+GCTDA+QV KE+ E YP I+GFDN RQ Q ++F+A KP G Sbjct: 58 FETLSYLPPLTQEQLLKQVDYLLRNNWVPCLEFSKE-GFVYRENSTSPCYYDGRYWTMWKLPMFGCTDASQVYKELQEAIASYP-ELRAILGFDNIRQTQWLTFIAYKPAG 166
BLAST of EY659866 vs. ExPASy Swiss-Prot
Match: RBS_MARPA (Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Marchantia paleacea GN=RBCS PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.239e-34 Identity = 65/110 (59.09%), Postives = 85/110 (77.27%), Query Frame = 3 Query: 30 FENLSYLPPLSDEALLKEISYLLRSGWIPCLEFELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEY-PHSFVRIIGFDNKRQVQCISFLAAKP 356 FE LSYLPPLS +AL K+I Y+++SGW PC+EF+++ G V RE + PGYYDGRYWTMWKLPM+GCTD+ VL+E+ E +K Y ++R +GFDN RQVQC SF+ +P Sbjct: 70 FETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQ-GTVTREGSTMPGYYDGRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQVQCASFIVHQP 178
BLAST of EY659866 vs. ExPASy Swiss-Prot
Match: RBS_SINAL (Ribulose bisphosphate carboxylase small chain (Fragment) OS=Sinapis alba GN=RBCS PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.737e-32 Identity = 60/77 (77.92%), Postives = 70/77 (90.91%), Query Frame = 3 Query: 129 ELEKGWVYREHHSSPGYYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQVQCISFLAAKPP 359 ELE G+VYREH S+PGYYDGRYWTMWKLP++GCTD+ QVLKEV E +KEYP++F+RIIGFDN RQVQCISF+A KPP Sbjct: 1 ELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPP 77 The following BLAST results are available for this feature:
BLAST of EY659866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 124
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659866 ID=EY659866; Name=EY659866; organism=Citrus sinensis; type=EST; length=926bpback to top |