EY659850

Overview
NameEY659850
Unique NameEY659850
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659850_ssr241 microsatellite EY659850_ssr241:241..252. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659850 vs. ExPASy Swiss-Prot
Match: XTH17_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 17 OS=Arabidopsis thaliana GN=XTH17 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.962e-42
Identity = 84/188 (44.68%), Postives = 120/188 (63.83%), Query Frame = 2
Query:  188 TFLEDFKVTWSDAHLRQLE-GGRXXQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNQTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGK--APFPMNNPWGVYSTLWGADDWGTEVVL-RNRLEKAPF 739
            +F +D ++ W D   +  +  G+   L LD++SG GF S +++L+G+  +++KLVPG+SAGTVT FY+ S      DE+DFEFLGN +G PYT+ TN+Y  G GD+EQ+ +LWFDP  ++H Y I WN   I+F VD +PIR +KN      PFP   P  +Y++LW A+ W T   L +    KAPF
Sbjct:   28 SFHKDVQIHWGDGRGKIHDRDGKLLSLSLDKSSGSGFQSNQEFLYGKAEVQMKLVPGNSAGTVTTFYLKS-PGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVNFHTYCITWNPQRIIFTVDGIPIREFKNPEAIGVPFPTRQPMRLYASLWEAEHWATRGGLEKTDWSKAPF 214          
BLAST of EY659850 vs. ExPASy Swiss-Prot
Match: XTH8_ORYSJ (Xyloglucan endotransglycosylase/hydrolase protein 8 OS=Oryza sativa subsp. japonica GN=XTH8 PE=1 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 3.346e-42
Identity = 80/173 (46.24%), Postives = 114/173 (65.90%), Query Frame = 2
Query:  191 FLEDFKVTWSDAHLRQL-EGGRXXQ--LVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNQTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGKAPFPMNNPWGVYSTLWGADDWGT 700
            F E F V  +  H+R + + G+  Q  L LD++SG GF SK  YLFG  S+++KLV G+SAGTVT+FY++S   +  DE+D EF+GN +G PY + TN++ANG G +E +  LWFDP AD+H Y I+WN  +I+F VDDVP+R +K      +P + P  +++TLW    W T
Sbjct:   28 FYEKFDVVGAGDHVRVVSDDGKTQQVALTLDRSSGSGFTSKDTYLFGEFSVQMKLVGGNSAGTVTSFYLSSGEGDGHDEIDIEFMGNLSGNPYVMNTNVWANGDGKKEHQFYLWFDPTADFHTYKIIWNPQNIIFQVDDVPVRTFKKYDDLAYPQSKPMRLHATLWDGSYWAT 200          
BLAST of EY659850 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.271e-41
Identity = 83/174 (47.70%), Postives = 114/174 (65.52%), Query Frame = 2
Query:  185 VTFLEDFKVTWSDAHLRQLEGGRXXQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNQTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGKA--PFPMNNPWGVYSTLWGADDWGT 700
            + F  ++ VTW   H+ +L  G+  QL +D +SG GF SK  Y  G   M+IKL P DSAG VTAFY+ S  +   DE+DFEFLGN+ G+P  +QTN+++NG+G REQ+   WFDP   +H Y ILWN + IVFYVD VPIRV+KN  K+   +P + P  + ++LW  ++W T
Sbjct:   30 IDFDVNYVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLTSKGDT-HDEVDFEFLGNRQGKPIAIQTNVFSNGQGGREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYP-SKPMQLVASLWNGENWAT 201          
BLAST of EY659850 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.836e-40
Identity = 82/175 (46.86%), Postives = 117/175 (66.86%), Query Frame = 2
Query:  185 VTFLEDFKVTWSDAHLRQLEGGRXXQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNQTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGKAPFPMNNPWGVYSTLWGADDWGTE 703
            V F +++ VTW   ++ +L  G+  QL LD +SG GF SK  Y  G   ++IK+ P D++G VTAFY+ S   N  DE+DFEFLGN+ G+   VQTN++ NGKG+REQ++ LWFDP+ D+H Y ILWN + IV YVD++P+RV+KN  S    +P + P  V  +LW  ++W T+
Sbjct:   37 VGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSKG-NTHDEVDFEFLGNKEGK-LAVQTNVFTNGKGNREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYP-SKPMQVVVSLWNGENWATD 208          
BLAST of EY659850 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 156.762 bits (395), Expect = 1.455e-37
Identity = 79/178 (44.38%), Postives = 105/178 (58.99%), Query Frame = 2
Query:  191 FLEDFKVTWSDAHLRQLEGGRXXQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENV--RDELDFEFLGNQTGQPYTVQTNIYANGKGDR-----EQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGKAPFPMNNPWGVYSTLWGADDWGTE 703
            F  +F+  W   H R+ +      L LD+++G GF S R Y  G     IKL PG +AG  T+ Y+++N E+    DE+D EFLG   G+PY++QTN++  G GDR     E +  LWFDP  D+H Y ILWN + IVF+VDDVPIR Y    +A FP    W VY ++W A DW TE
Sbjct:   39 FDREFRTLWGSQHQRREQD--VVTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYNRKNEAIFPTRPMW-VYGSIWDASDWATE 213          
BLAST of EY659850 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.826e-35
Identity = 79/179 (44.13%), Postives = 104/179 (58.10%), Query Frame = 2
Query:  185 VTFLEDFKVTWSDAHLRQLEGGRXXQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLGNQTGQPYTVQTNIYANGKGD--REQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGK--APFPMNNPWGVYSTLWGADDWGTE 703
            + F E +   + D +L     G+  +L LD+ +G GF S   YL G  S  IKL    SAG V AFY+++    E   DE+DFEFLGN  G+ + +QTNIY NG     RE+R NLWFDP  D+H Y+ILW+  HI+FYVD+VPIR  K +      FP   P  +YST+W    W T+
Sbjct:   29 IQFDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPA-KPMSLYSTIWDGSKWATD 206          
BLAST of EY659850 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.966e-34
Identity = 72/180 (40.00%), Postives = 101/180 (56.11%), Query Frame = 2
Query:  185 VTFLEDFKVTWSDAHLRQLEGGRXXQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLGNQTGQPYTVQTNIYANGKGD-----REQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGKAPFPMNNPWGVYSTLWGADDWGTE 703
            + F + F+  W   H R  +      + LD+ SG GF S + +  G     IKL PG +AG +T+ Y+++N  +    DE+D EFLG   G+PYT+QTN+Y  G GD     RE +  LWFDP  D+H Y ILW+   I+F VDD+PIR Y     + FP+   W +Y ++W A  W TE
Sbjct:   41 LNFYKGFRNLWGPQHQRMDQNA--LTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIRRYPKKSASTFPLRPMW-LYGSIWDASSWATE 217          
BLAST of EY659850 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 2.568e-34
Identity = 77/177 (43.50%), Postives = 105/177 (59.32%), Query Frame = 2
Query:  188 TFLEDFKVTWSDAHLRQLEGGRXXQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLGNQTGQPYTVQTNIYANGK--GDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGK--APFPMNNPWGVYSTLWGADDWGT 700
            +F E +   + D +L   + G+  +L LD+ +G GF S   YL G  S  IKL    +AG V AFYM++    E   DE+DFEFLGN   + + VQTNIY NG     RE+R NLWFDP  D+H Y+ILW+  HI+F+VD+VPIR  K + +    FP + P  +Y+T+W    W T
Sbjct:   30 SFEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFP-SKPMSLYTTIWDGSKWAT 205          
BLAST of EY659850 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 2.839e-33
Identity = 80/198 (40.40%), Postives = 108/198 (54.55%), Query Frame = 2
Query:  131 LFVLIYCXVXXSXVLGXXV---TFLEDFKVTWSDAHLRQLEGGRXXQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNT--ENVRDELDFEFLGNQTGQPYTVQTNIYANGKGDR--EQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIR-VYKNSGKAPFPMNNPWGVYSTLWGADDWGT 700
            +F+LI C    S      +   +F E     + DA+L +       +L+LD+ +G GF S   Y  G  S  IKL    +AG V AFY ++    E   DELD EFLGN  G+P+  QTN+Y NG   R  E+R  LWFDP+ ++H Y+ILW  H I+F+VDDVPIR V +N          P  +Y+T+W A DW T
Sbjct:    9 IFILILCLCLRSSSAFTNLNTLSFEESLSPLFGDANLVRSPDDLSVRLLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPAKPMALYATIWDASDWAT 206          
BLAST of EY659850 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 132.494 bits (332), Expect = 2.938e-30
Identity = 68/167 (40.72%), Postives = 100/167 (59.88%), Query Frame = 2
Query:  224 AHLRQLEGGRXXQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENV---RDELDFEFLGNQTGQPYTVQTNIYANG--KGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--KAPFPMNNPWGVYSTLWGADDWGTE 703
            AH  Q+ G    +L LD++SG G  SK +Y +G  S ++KL  G ++G V AFY+ SN E      DE+D E LG      +T+QTN+YANG  +  RE++   WFDP   +H YT++WN HH VF VD++P+R + N G   + +P + P  +Y T+W   +W T+
Sbjct:   53 AHNIQVNGS-LAKLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYL-SNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYP-SKPMSLYVTVWDGSEWATK 216          
The following BLAST results are available for this feature:
BLAST of EY659850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
XTH17_ARATH1.962e-4244.68Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ORYSJ3.346e-4246.24Xyloglucan endotransglycosylase/hydrolase protein ... [more]
XTH2_ARATH1.271e-4147.70Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH1_ARATH1.836e-4046.86Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH31_ARATH1.455e-3744.38Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH28_ARATH8.826e-3544.13Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH32_ARATH1.966e-3440.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH27_ARATH2.568e-3443.50Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH30_ARATH2.839e-3340.40Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH33_ARATH2.938e-3040.72Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-G07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659850 ID=EY659850; Name=EY659850; organism=Citrus sinensis; type=EST; length=852bp
TTCTTCANTATGGGGGGGGNNNGNANATAATTTCCTATGAGAGGGGAGNT
NTNTTTNTAATTAGTAANAGATAATATTTTATTGTATTGCTCCTCTTTAA
GATATGGNTATNNTAAGAAATGGAATAGNATTATTTGTGTTGATTTACTG
TNTTGTATNNTGNTCTTGNGTTTTAGGGNGANCGGTTACTTTTCTTGAGG
ATTTTAAAGTNACATGGTCCGATGCCCATCTCAGGCAATTGGAGGGAGGG
AGGNCCNTCCAGCTAGTTCTAGACCAAAATTCAGGATGTGGGTTTGCTTC
CAAAAGGCAGTACTTGTTCGGGCGTGTAAGCATGAAGATCAAGCTCGTTC
CTGGAGACTCTGCTGGAACTGTCACTGCATTTTATATGAATTCCAACACC
GAAAATGTGAGAGACGAGCTTGATTTTGAGTTCCTGGGAAACCAAACGGG
TCAGCCTTACACGGTCCAGACCAATATCTATGCAAATGGAAAAGGCGATA
GAGAACAGAGAGTGAACCTCTGGTTTGACCCTGCTGCAGATTATCACCTT
TACACTATTCTCTGGAACCATCACCATATTGTCTTCTATGTGGATGATGT
GCCCATCAGGGTTTACAAAAACAGTGGAAAGGCTCCATTTCCAATGAACA
ACCCATGGGGGGTGTATTCNACGCTGTGGGGAGCAGATGACTGGGGAACA
GAAGTGGTCTTGAGAAATAGATTGGAGAAAGCTCCTTTTTTGGTTATTAA
AGAGATTTGGTATTNNNNNNNGGCCAGTTCTGGGACAGAAAATTTGGCTT
GAACCCAGGTAATTGGGGGAAGCAAATTATTTTAAGCCTTACCGGCCTGG
GA
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