EY659844
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659844 vs. ExPASy Swiss-Prot
Match: SBP1_PONAB (Selenium-binding protein 1 OS=Pongo abelii GN=SELENBP1 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 6.066e-59 Identity = 135/284 (47.54%), Postives = 169/284 (59.51%), Query Frame = 1 Query: 67 HHSGWNSCSSCYGDSSALRPFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLASGDILVSCLGDKDGNAEGNGFLLLDSE-FNVKGRWEKPGHSPAFGYDFWYQPRHKTMISSSWGAPLAFTKGFNLQHVSDGLYGRHLFVYSWPDGELKQTLDLGNTGLIPLEIXXLHDPL*E*GL*VVP*QVHGSXFQTQNDHGIMXVQYQ*NL*RCKI-GYFL-KMQGLLLTF*FPLMIGSL-LSHWLHEEFHRIH*GS-QNPXLTGQSGSGG 903 HHSGWN+CSSC+GDS+ R LVLPSL+S RIY+VD PRA LHKV+EP DI K L++ HT+HCLASG++++S LGD GN +G GF+LLD+E F VKG WE+ G + GYDFWYQPRH MIS+ W AP GFN V GLYG HL+V+ W E+ QTL L GLIPLEI LH+P G F +N+ G V+ + K+ G+ L +M GL+ L L S+WLH + + Q P LTGQ GG Sbjct: 73 HHSGWNTCSSCFGDSTKSRTKLVLPSLISSRIYVVDVGSEPRALKLHKVIEPKDIHAKCELAFLHTSHCLASGEVMISSLGDVKGNGKG-GFVLLDAETFEVKGTWERRGGAAPLGYDFWYQPRHNVMISTEWAAPNVLRDGFNPADVEAGLYGSHLYVWDWQRHEIVQTLSL-KDGLIPLEIRFLHNPDAAQGFVGCALSSTIQRFY-KNEGGTWSVEKVIQVPPKKVKGWLLPEMPGLITDILLSLDDRFLYFSNWLHGDLRQYDISDPQRPRLTGQLFVGG 353
BLAST of EY659844 vs. ExPASy Swiss-Prot
Match: SBP_CAEEL (Putative selenium-binding protein OS=Caenorhabditis elegans GN=R11G10.2 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.101e-14 Identity = 59/216 (27.31%), Postives = 104/216 (48.15%), Query Frame = 1 Query: 19 PXRNSFSTRASDWRCTHHS------GWNSCSSCYGDSSA-LRPFLVLPSLVSGRIYIVDTQKNPRAPSLHKVVEPADIVQKTGLSYPHTAHCLA--SGDILVSCLGDKDGNAEGNGFLLLDSEFNVKGRWEKPGHSPAFGYDFWYQPRHKTMISSSWGAPLAFTKGF---NLQHVSDGLYGRHLFVYSWPDGELKQTLDLGN-TGLIPLEIXXLHD 627 P +F T S+ T + W + G+ + +R +++P + SG+IY++ + + K + ++++K +S P+ L + VS LGD+ GN +G+ F+L+D + +P S +G DF QPRH MISS WG P GF L++VS+ +G L V+ +L Q+++L G + + + LH+ Sbjct: 115 PTSETFCTILSEVHLTSNGDEPGRMNWAKSAESLGEMNKFVRRNIIVPCMNSGKIYVIAFENEKLW--IEKEIRNDELIRKD-VSCPYAVRSLPLKGAPVHVSTLGDRFGNGKGD-FILIDRRTWEVRKKSEPTFSD-YGGDFSLQPRHNLMISSEWGHPRLLRDGFMPSELENVSES-FGARLHVWQISPPKLIQSINLDTCDGSLVICVKFLHN 324 HSP 2 Score: 32.7278 bits (73), Expect = 3.101e-14 Identity = 15/37 (40.54%), Postives = 20/37 (54.05%), Query Frame = 3 Query: 702 WNHXGAISVKSLKVQNWILSENARAITDFLISLDDRF 812 W V LKV+NW E +TD +IS+DDR+ Sbjct: 352 WAADRVAHVPLLKVENWQSDEMPALLTDMIISMDDRW 388 The following BLAST results are available for this feature:
BLAST of EY659844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659844 ID=EY659844; Name=EY659844; organism=Citrus sinensis; type=EST; length=946bpback to top |