EY659834

Overview
NameEY659834
Unique NameEY659834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659834 vs. ExPASy Swiss-Prot
Match: IDHP_RAT (Isocitrate dehydrogenase [NADP], mitochondrial OS=Rattus norvegicus GN=Idh2 PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 2.477e-49
Identity = 99/142 (69.72%), Postives = 110/142 (77.46%), Query Frame = 1 
Query:   25 YACNKKNYDGDVQSDFLAQGFGPLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTR--EHYLNTEEFIDAVADDL 444
            +AC  KNYDGDVQSD LAQGFG LGLMTSVLVCPDGKTIEAEAAHGTVTRHYR HQKG  TSTN IASIFAW+RGL HR KLD N  L+ F + LE  C+ TVESG MTKDLA  IHG    +  EH+LNT +F+D +  +L
Sbjct:  306 WAC--KNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVQTVESGAMTKDLAGCIHGLSNVKLNEHFLNTTDFLDTIKSNL 445
[Close]
BLAST of EY659834 vs. ExPASy Swiss-Prot
Match: IDHP_MOUSE (Isocitrate dehydrogenase [NADP], mitochondrial OS=Mus musculus GN=Idh2 PE=1 SV=3)

HSP 1 Score: 196.052 bits (497), Expect = 2.477e-49
Identity = 99/142 (69.72%), Postives = 110/142 (77.46%), Query Frame = 1 
Query:   25 YACNKKNYDGDVQSDFLAQGFGPLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTR--EHYLNTEEFIDAVADDL 444
            +AC  KNYDGDVQSD LAQGFG LGLMTSVLVCPDGKTIEAEAAHGTVTRHYR HQKG  TSTN IASIFAW+RGL HR KLD N  L+ F + LE  C+ TVESG MTKDLA  IHG    +  EH+LNT +F+D +  +L
Sbjct:  306 WAC--KNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVQTVESGAMTKDLAGCIHGLSNVKLNEHFLNTTDFLDTIKSNL 445
[Close]
BLAST of EY659834 vs. ExPASy Swiss-Prot
Match: IDHP_MACFA (Isocitrate dehydrogenase [NADP], mitochondrial OS=Macaca fascicularis GN=IDH2 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.477e-49
Identity = 99/142 (69.72%), Postives = 110/142 (77.46%), Query Frame = 1 
Query:   25 YACNKKNYDGDVQSDFLAQGFGPLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTR--EHYLNTEEFIDAVADDL 444
            +AC  KNYDGDVQSD LAQGFG LGLMTSVLVCPDGKTIEAEAAHGTVTRHYR HQKG  TSTN IASIFAW+RGL HR KLD N  L+ F + LE  C+ TVESG MTKDLA  IHG    +  EH+LNT +F+D +  +L
Sbjct:  306 WAC--KNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTTDFLDTIKSNL 445
[Close]
BLAST of EY659834 vs. ExPASy Swiss-Prot
Match: IDHP_HUMAN (Isocitrate dehydrogenase [NADP], mitochondrial OS=Homo sapiens GN=IDH2 PE=1 SV=2)

HSP 1 Score: 196.052 bits (497), Expect = 2.477e-49
Identity = 99/142 (69.72%), Postives = 110/142 (77.46%), Query Frame = 1 
Query:   25 YACNKKNYDGDVQSDFLAQGFGPLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTR--EHYLNTEEFIDAVADDL 444
            +AC  KNYDGDVQSD LAQGFG LGLMTSVLVCPDGKTIEAEAAHGTVTRHYR HQKG  TSTN IASIFAW+RGL HR KLD N  L+ F + LE  C+ TVESG MTKDLA  IHG    +  EH+LNT +F+D +  +L
Sbjct:  306 WAC--KNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREHQKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQMLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTTDFLDTIKSNL 445
[Close]
BLAST of EY659834 vs. ExPASy Swiss-Prot
Match: IDHC_SHEEP (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Ovis aries GN=IDH1 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 7.207e-49
Identity = 98/146 (67.12%), Postives = 117/146 (80.14%), Query Frame = 1 
Query:   25 YACNKKNYDGDVQSDFLAQGFGPLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHG-SKMTREHYLNTEEFIDAVADDLRARLS 459
            +AC  KNYDGDVQSD +AQG+G LG+MTSVLVCPDGKT+EAEAAHGTVTRHYR++QKG ETSTN IASIFAW+RGLAHRAKLDNN  L  F + LE  CI T+E+G MTKDLA  I G   + R  YLNT EF+D + ++L+ +L+
Sbjct:  267 WAC--KNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWTRGLAHRAKLDNNKELSFFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLQLKLA 410
[Close]
BLAST of EY659834 vs. ExPASy Swiss-Prot
Match: IDHC_BOVIN (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Bos taurus GN=IDH1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 3.577e-48
Identity = 97/146 (66.44%), Postives = 116/146 (79.45%), Query Frame = 1 
Query:   25 YACNKKNYDGDVQSDFLAQGFGPLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHG-SKMTREHYLNTEEFIDAVADDLRARLS 459
            +AC  KNYDGDVQSD +AQG+G LG+MTSVLVCPDGKT+EAEAAHGTVTRHYR++QKG ET TN IASIFAW+RGLAHRAKLDNN  L  F + LE  CI T+E+G MTKDLA  I G   + R  YLNT EF+D + ++L+ +L+
Sbjct:  267 WAC--KNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQKGQETLTNPIASIFAWTRGLAHRAKLDNNKELSFFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLQLKLA 410
[Close]
BLAST of EY659834 vs. ExPASy Swiss-Prot
Match: IDHC_HUMAN (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Homo sapiens GN=IDH1 PE=1 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 7.969e-48
Identity = 97/146 (66.44%), Postives = 115/146 (78.77%), Query Frame = 1 
Query:   25 YACNKKNYDGDVQSDFLAQGFGPLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHG-SKMTREHYLNTEEFIDAVADDLRARLS 459
            +AC  KNYDGDVQSD +AQG+G LG+MTSVLVCPDGKT+EAEAAHGTVTRHYR++QKG ETSTN IASIFAW+RGLAHRAKLDNN  L  F   LE   I T+E+G MTKDLA  I G   + R  YLNT EF+D + ++L+ +L+
Sbjct:  267 WAC--KNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWTRGLAHRAKLDNNKELAFFANALEEVSIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKIKLA 410
[Close]
BLAST of EY659834 vs. ExPASy Swiss-Prot
Match: IDHC_PONAB (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Pongo abelii GN=IDH1 PE=2 SV=2)

HSP 1 Score: 190.66 bits (483), Expect = 1.041e-47
Identity = 96/146 (65.75%), Postives = 115/146 (78.77%), Query Frame = 1 
Query:   25 YACNKKNYDGDVQSDFLAQGFGPLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHG-SKMTREHYLNTEEFIDAVADDLRARLS 459
            +AC  KNYDGDVQSD +AQG+G LG+MTSVLVCPDGKT+EAEAAHGTVTRHYR++QKG ETSTN IASIFAW+RGLAHRAKLDNN  L  F   LE   + T+E+G MTKDLA  I G   + R  YLNT EF+D + ++L+ +L+
Sbjct:  267 WAC--KNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWTRGLAHRAKLDNNKELAFFANALEEVSVETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKIKLA 410
[Close]
BLAST of EY659834 vs. ExPASy Swiss-Prot
Match: IDH_MYCTU (Isocitrate dehydrogenase [NADP] OS=Mycobacterium tuberculosis GN=icd PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.711e-46
Identity = 93/146 (63.70%), Postives = 111/146 (76.03%), Query Frame = 1 
Query:   22 GYACNKKNYDGDVQSDFLAQGFGPLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARLS 459
            GY    KNYDGDVQSD +AQG+G LGLMTSVL+  DGKT+EAEAAHGTVTRHYR +Q G  TSTN IASIFAW+RGL HR KLD    ++DF  KLE+  I TVESGKMTKDLA++I       + +LN+EEF+DA+AD+L   L+
Sbjct:  267 GYVWACKNYDGDVQSDTVAQGYGSLGLMTSVLMTADGKTVEAEAAHGTVTRHYRQYQAGKPTSTNPIASIFAWTRGLQHRGKLDGTPEVIDFAHKLESVVIATVESGKMTKDLAILIG----PEQDWLNSEEFLDAIADNLEKELA 408
[Close]
BLAST of EY659834 vs. ExPASy Swiss-Prot
Match: IDH_MYCBO (Isocitrate dehydrogenase [NADP] OS=Mycobacterium bovis GN=icd PE=3 SV=1)

HSP 1 Score: 184.882 bits (468), Expect = 5.711e-46
Identity = 93/146 (63.70%), Postives = 111/146 (76.03%), Query Frame = 1 
Query:   22 GYACNKKNYDGDVQSDFLAQGFGPLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARLS 459
            GY    KNYDGDVQSD +AQG+G LGLMTSVL+  DGKT+EAEAAHGTVTRHYR +Q G  TSTN IASIFAW+RGL HR KLD    ++DF  KLE+  I TVESGKMTKDLA++I       + +LN+EEF+DA+AD+L   L+
Sbjct:  267 GYVWACKNYDGDVQSDTVAQGYGSLGLMTSVLMTADGKTVEAEAAHGTVTRHYRQYQAGKPTSTNPIASIFAWTRGLQHRGKLDGTPEVIDFAHKLESVVIATVESGKMTKDLAILIG----PEQDWLNSEEFLDAIADNLEKELA 408
The following BLAST results are available for this feature:
BLAST of EY659834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
IDHP_RAT2.477e-4969.72Isocitrate dehydrogenase [NADP], mitochondrial OS=... [more]
IDHP_MOUSE2.477e-4969.72Isocitrate dehydrogenase [NADP], mitochondrial OS=... [more]
IDHP_MACFA2.477e-4969.72Isocitrate dehydrogenase [NADP], mitochondrial OS=... [more]
IDHP_HUMAN2.477e-4969.72Isocitrate dehydrogenase [NADP], mitochondrial OS=... [more]
IDHC_SHEEP7.207e-4967.12Isocitrate dehydrogenase [NADP] cytoplasmic OS=Ovi... [more]
IDHC_BOVIN3.577e-4866.44Isocitrate dehydrogenase [NADP] cytoplasmic OS=Bos... [more]
IDHC_HUMAN7.969e-4866.44Isocitrate dehydrogenase [NADP] cytoplasmic OS=Hom... [more]
IDHC_PONAB1.041e-4765.75Isocitrate dehydrogenase [NADP] cytoplasmic OS=Pon... [more]
IDH_MYCTU5.711e-4663.70Isocitrate dehydrogenase [NADP] OS=Mycobacterium t... [more]
IDH_MYCBO5.711e-4663.70Isocitrate dehydrogenase [NADP] OS=Mycobacterium b... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-F03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659834 ID=EY659834; Name=EY659834; organism=Citrus sinensis; type=EST; length=929bp
TTTCAAAGACCGGGCGTCCGAGGTTATGCTTGCAATAAAAAAAATTATGA
TGGAGATGTCCAGAGTGATTTCCTAGCTCAAGGGTTTGGACCCCTTGGAT
TGATGACATCTGTACTGGTATGCCCTGATGGGAAGACAATTGAAGCCGAA
GCAGCCCATGGAACAGTTACCCGACACTACAGAGTTCATCAGAAAGGTGG
TGAAACTAGCACAAACAGCATAGCCTCCATCTTTGCTTGGTCACGAGGGC
TTGCACATAGGGCGAAGTTGGACAACAATGCTAGGCTATTGGATTTTACT
GAGAAACTAGAAGCTGCATGTATTGGCACTGTTGAATCTGGGAAGATGAC
CAAGGATCTTGCACTTATTATCCATGGATCTAAGATGACTAGGGAACACT
ATCTGAATACTGAAGAGTTCATTGATGCTGTGGCCGACGATCTAAGAGCA
AGACTCTCTGGCAAAGCATGATTTTTTTTGTTGCAGATGCTACACATTCA
AAGGTAAAGACTTGGGGAAGCTTCCTTTGGTTATCTTTTTCATATTATGC
TGAGAAGAAATAATTGAAGAGGGGAAAATTGGGGATTGGGATTTGGTTCT
CTTCTAATTGCTACAATAGACTGCTTTCCTGTTGATCGACAAACTCTCAT
TTTCATGCAAGCAAATGTCTTGAACATGGCTTGTTATAAACAAAACTATT
GCTGCCAAATTTTACGTCATGGGTTTATTGAGCTGCACCTCTGTTGCCAA
AGTTTTAAGATGTACGCACACAAAACCTAAATATTTGCATTTCATCTCAT
GGTGAAATGCTCGTATTTTTGGATAGCTTTTGGAACGAAAAAAAAAAAAA
AAAAAAAAAGGCCGCCCGTCCTTAGATCCAAGCTTACGACGCTGGATGCG
AGGCATAACTCTCTAAAGGCCCCTAAATC
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