EY659832

Overview
NameEY659832
Unique NameEY659832
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: PPM1A_HUMAN (Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11
Identity = 47/163 (28.83%), Postives = 72/163 (44.17%), Query Frame = 3
Query:  249 QNGKFSYGYASSPGKRSSMEDFYETRIDGVEG-EIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKF--------ISDTKSAIADAYSHTDSEF-LKSENNQNRD-AGSTASTAILVGDRLLVANVGDSRAXICRGGNAIAVSRDHXPDQTDERQRIEDAXG 704
            Q     YG +S  G R  MED +   I    G E    F V+DGH G++ A+Y   +L  ++  +  F        + + K+ I   +   D    + SE     D +GSTA   ++        N GDSR  +CR       ++DH P    E++RI++A G
Sbjct:   18 QGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG 180          
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: P2C16_ORYSJ (Probable protein phosphatase 2C 16 OS=Oryza sativa subsp. japonica GN=Os02g0598400 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.384e-11
Identity = 53/191 (27.75%), Postives = 80/191 (41.88%), Query Frame = 3
Query:  249 QNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDA------------------------------------GSTASTAILVGDRLLVANVGDSRAXICR-GGNAIAVSRDHXP--DQTDERQRIEDAXG 704
            +N +  Y  +S  G    MED +   ++  +      FGV+DGHGGA  A Y        L  H  + +D  +A+ + +   D      EN Q  DA                                    GSTA   ++ G++++V +VGDSR  + R GG AI +S DH P      ER+R+++A G
Sbjct:   16 ENDRIKYVVSSMQGWGEKMEDAHAAILNLDDATSTSFFGVYDGHGGAEVALYCAKQFHIELCNHEDYHNDLINALDNVFLSMD------ENLQQSDAWRELVIPHDNGCMYFLKAGVCAKPFPQATYTGPAYEGSTACVVVIRGNQMIVGHVGDSRCVLSRQGGLAIDLSFDHKPCTRTESERERVQNAGG 200          
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: P2C17_ORYSJ (Probable protein phosphatase 2C 17 OS=Oryza sativa subsp. japonica GN=Os02g0599150 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.772e-11
Identity = 53/191 (27.75%), Postives = 80/191 (41.88%), Query Frame = 3
Query:  249 QNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDA------------------------------------GSTASTAILVGDRLLVANVGDSRAXICR-GGNAIAVSRDHXP--DQTDERQRIEDAXG 704
            +N +  Y  +S  G    MED +   ++  +      FGV+DGHGGA  A Y        L  H  + +D  +A+ + +   D      EN Q  DA                                    GSTA   ++ G++++V +VGDSR  + R GG AI +S DH P      ER+R+++A G
Sbjct:   40 ENDRIKYVVSSMQGWGEKMEDAHAAILNLDDTTSTSFFGVYDGHGGAEVALYCAKQFHIELCNHEDYHNDLINALDNVFLSMD------ENLQQSDAWRELVIPHDNGCMYFLKAGVCAKPFPQATYTGPAYEGSTACVVVIRGNQMIVGHVGDSRCVLSRQGGLAIDLSFDHKPCTRTESERERVQNAGG 224          
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: PPM1B_MOUSE (Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11
Identity = 47/163 (28.83%), Postives = 72/163 (44.17%), Query Frame = 3
Query:  267 YGYASSPGKRSSMEDFYETRIDGVEG-EIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKF-------------ISDTKSAIADAYSHTDS---EFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAXICRGGNAIAVSRDHXPDQTDERQRIEDAXG 704
            YG +S  G R  MED +   +    G +    F V+DGH G+R A Y   +L  ++  +  F             +   K+ I   +   D     F    N  +R +GSTA   ++    +   N GDSRA +CR G     ++DH P    E++RI++A G
Sbjct:   24 YGLSSMQGWRVEMEDAHTAVVGIPHGLDNWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAADKSGSALEPSVESVKTGIRTGFLKIDEYMRNFSDLRNGMDR-SGSTAVGVMVSPTHMYFINCGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGG 185          
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: PP2C2_CAEEL (Probable protein phosphatase 2C T23F11.1 OS=Caenorhabditis elegans GN=T23F11.1 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 7.538e-11
Identity = 43/155 (27.74%), Postives = 70/155 (45.16%), Query Frame = 3
Query:  252 NGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFIS-DTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAXICRGGNAIAVSRDHXPDQTDERQRIEDAXGFCD 713
            N  +  G +   G R  MED +   +   +      F V+DGHGG++ ++Y   NL   ++   +F   + K AI   +   D +    E  ++  +G+TA   ++    +   N GDSRA     G A  +S DH P    E +RI  A G+ +
Sbjct:   19 NENYLVGSSCMQGWRVDMEDAHTHLLSLPDDPKCAFFAVYDGHGGSKVSQYSGINLHKKVVAQKEFSEGNMKEAIEKGFLELDQQMRVDEETKDDVSGTTAVVVLIKEGDVYCGNAGDSRAVSSVVGEARPLSFDHKPSHETEARRIIAAGGWVE 173          
BLAST of EY659832 vs. ExPASy Swiss-Prot
Match: P2C67_ORYSJ (Probable protein phosphatase 2C 67 OS=Oryza sativa subsp. japonica GN=Os09g0314400 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.845e-11
Identity = 51/167 (30.54%), Postives = 77/167 (46.11%), Query Frame = 3
Query:  276 ASSPGKRSSMEDFYETRIDGVEGEIVGL----FGVFDGHGGARAAEYVKHNLFSNLIRH--PKFISDTKSA---IADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAXICRGGN---------------AIAVSRDHXPDQTDERQRIEDAXG 704
            A   G R +MED +    D        L    F ++DGHGG  AAEY + +L  N+I    P+ + D K+A   I + +  TD   L+     N   G+TA    ++G  ++VAN GD++A + R  +               AI ++R+H      ER RI+ A G
Sbjct:   95 AEDKGCRHTMEDAWVLLPDASMESPGNLRCAHFAIYDGHGGRLAAEYAQKHLHQNVIAAGLPRELMDVKAAKKAIIEGFRRTDECLLQESTKGNWQDGATAVCVWVLGQTVVVANAGDAKAVLARSTSADGEGAVDDAKSQLKAIVLTREHKAIFPQERARIQKAGG 261          
The following BLAST results are available for this feature:
BLAST of EY659832 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 106
Match NameE-valueIdentityDescription
PPM1A_HUMAN3.384e-1128.83Protein phosphatase 1A OS=Homo sapiens GN=PPM1A PE... [more]
P2C16_ORYSJ3.384e-1127.75Probable protein phosphatase 2C 16 OS=Oryza sativa... [more]
P2C17_ORYSJ5.772e-1127.75Probable protein phosphatase 2C 17 OS=Oryza sativa... [more]
PPM1B_MOUSE7.538e-1128.83Protein phosphatase 1B OS=Mus musculus GN=Ppm1b PE... [more]
PP2C2_CAEEL7.538e-1127.74Probable protein phosphatase 2C T23F11.1 OS=Caenor... [more]
P2C67_ORYSJ9.845e-1130.54Probable protein phosphatase 2C 67 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-F01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659832 ID=EY659832; Name=EY659832; organism=Citrus sinensis; type=EST; length=907bp
TCCTCAACCGAGGCGTCCGTAATTCGTGATATCGAAATGATCTAACGAAT
GTGCAATCACCTATTGTAACTAACCAAAACGCTGTCGCTGCTGCAGTTAT
TGCTTTCGTTGTTATTAATTTATTTTCTCTTCCGAGTGGTTAACGAATTG
GAACTTGAAGCGAAACCATGGGGTATTTGAACTCGGTGTTGTCATCTTCA
AGCCAGGTTCACGCCGATGATTCGCCGGCTAGCGGCGGGGGCCTTAGTCA
GAACGGAAAGTTCAGCTACGGATATGCGAGTTCTCCTGGCAAGAGGTCTT
CTATGGAAGATTTTTATGAGACCAGAATTGATGGCGTCGAAGGAGAGATA
GTAGGCCTCTTTGGAGTTTTTGATGGTCATGGGGGTGCACGAGCTGCTGA
GTATGTGAAACACAACCTCTTCAGCAATCTGATCAGGCATCCAAAGTTCA
TATCTGATACCAAATCGGCAATAGCTGATGCATACAGCCACACAGACTCG
GAATTTCTGAAGTCAGAAAACAATCAAAACAGGGATGCTGGATCTACTGC
TTCCACTGCCATCCTTGTTGGTGATCGCTTACTTGTTGCAAATGTGGGTG
ACTCCAGAGCTGNTATATGCAGGGGCGGTAATGCTATTGCCGTATCGCGA
GATCACAANCCAGACCAAACAGATGAGCGTCAACGGATTGAGGATGCANG
AGGNTTTTGTGATGTGGCTGGAACTTNGAAAGTGGAGGGAGTCTTTGCCG
TTCTCGCGCATTTGGTGACGACTCTTGAGCAAGATGNTGNTGCTGATCCC
GAATTTCAGAAGAAAGTATGAACACTCCCTGGAGTTCCTATCCTTGCAGG
GATGGACTTTGGATGTCGCCCCAATGAGGAGCTGTGCGATGATCACCCAT
CAGGATC
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