EY659830

Overview
NameEY659830
Unique NameEY659830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7614 contig Csv1_Contig7614:1..914. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: HAT7_ARATH (Homeobox-leucine zipper protein HAT7 OS=Arabidopsis thaliana GN=HAT7 PE=2 SV=4)

HSP 1 Score: 95.9005 bits (237), Expect = 3.543e-19
Identity = 50/82 (60.98%), Postives = 61/82 (74.39%), Query Frame = 3
Query:  609 DRDENGDED--FDEYFHQP--EKKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKTNSSRR 842
            D+D+ G+ED   D+  H    EKK+RL ++QV+ LEKSFE+ NKLEP R+  LAK LGLQPRQ+AIWFQNRRARWKT    R
Sbjct:   93 DQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKLEPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLER 174          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: ATB13_ARATH (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana GN=ATHB-13 PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.628e-19
Identity = 46/70 (65.71%), Postives = 57/70 (81.43%), Query Frame = 3
Query:  621 NGDEDF-DEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKT 827
            NG+ED+ D+     EKKRRL ++QV+ LEK+FE+ NKLEP R+  LA+ LGLQPRQ+AIWFQNRRARWKT
Sbjct:   70 NGEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKT 139          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: ATHB5_ARATH (Homeobox-leucine zipper protein ATHB-5 OS=Arabidopsis thaliana GN=ATHB-5 PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.346e-18
Identity = 44/61 (72.13%), Postives = 52/61 (85.25%), Query Frame = 3
Query:  660 EKKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKTNSSRR 842
            EKKRRL V+QV+ LEK+FE++NKLEP R+  LA++LGLQPRQVAIWFQNRRARWKT    R
Sbjct:   71 EKKRRLGVEQVKALEKNFEIDNKLEPERKVKLAQELGLQPRQVAIWFQNRRARWKTKQLER 131          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: ATHB6_ARATH (Homeobox-leucine zipper protein ATHB-6 OS=Arabidopsis thaliana GN=ATHB-6 PE=1 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.758e-18
Identity = 45/73 (61.64%), Postives = 58/73 (79.45%), Query Frame = 3
Query:  660 EKKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKTNS-SRRIRCIANSYNSL 875
            EKKRRL+++QV+ LEK+FE+ENKLEP R+  LA++LGLQPRQVA+WFQNRRARWKT    +    +   Y+SL
Sbjct:   61 EKKRRLSINQVKALEKNFELENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLEKDYGVLKTQYDSL 133          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSJ (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica GN=HOX21 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.918e-18
Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 3
Query:  627 DEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKT 827
            DE  D+     EKKRRL V+QV+ LEK+FE+ NKLEP R+  LA+ LGLQPRQVAIWFQNRRARWKT
Sbjct:  118 DELSDDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKT 184          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: HOX21_ORYSI (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica GN=HOX21 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.918e-18
Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 3
Query:  627 DEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKT 827
            DE  D+     EKKRRL V+QV+ LEK+FE+ NKLEP R+  LA+ LGLQPRQVAIWFQNRRARWKT
Sbjct:  112 DELSDDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKT 178          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: ATB20_ARATH (Homeobox-leucine zipper protein ATHB-20 OS=Arabidopsis thaliana GN=ATHB-20 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 6.682e-18
Identity = 53/104 (50.96%), Postives = 65/104 (62.50%), Query Frame = 3
Query:  564 HLANGSNNRPFFRPF-------DRDENGDED--FDEYFHQP--EKKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKTNSSRR 842
            HL NG  N    R         D ++  DE+   D+  H    EKK+RL ++QV+ LEKSFE+ NKLEP R+  LAK LG+QPRQ+AIWFQNRRARWKT    R
Sbjct:   43 HLFNGGGNYMMNRSMSLMNVQEDHNQTLDEENLSDDGAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPRQIAIWFQNRRARWKTRQLER 146          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSJ (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. japonica GN=HOX13 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.944e-17
Identity = 40/61 (65.57%), Postives = 51/61 (83.61%), Query Frame = 3
Query:  660 EKKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKTNSSRR 842
            EKKRRL ++QV+ LE+SF+ +NKL+P R+  +A+DLGLQPRQVA+WFQNRRARWKT    R
Sbjct:   71 EKKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLER 131          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: HOX13_ORYSI (Homeobox-leucine zipper protein HOX13 OS=Oryza sativa subsp. indica GN=HOX13 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.944e-17
Identity = 40/61 (65.57%), Postives = 51/61 (83.61%), Query Frame = 3
Query:  660 EKKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKTNSSRR 842
            EKKRRL ++QV+ LE+SF+ +NKL+P R+  +A+DLGLQPRQVA+WFQNRRARWKT    R
Sbjct:   71 EKKRRLALEQVRALERSFDTDNKLDPDRKARIARDLGLQPRQVAVWFQNRRARWKTKQLER 131          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: HOX23_ORYSJ (Homeobox-leucine zipper protein HOX23 OS=Oryza sativa subsp. japonica GN=HOX23 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.539e-17
Identity = 43/56 (76.79%), Postives = 49/56 (87.50%), Query Frame = 3
Query:  660 EKKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKT 827
            EKKRRL+V+QV+ LE+SFE  NKLEP R+  LA+ LGLQPRQVAIWFQNRRARWKT
Sbjct:  103 EKKRRLSVEQVRTLERSFESGNKLEPERKAQLARALGLQPRQVAIWFQNRRARWKT 158          
The following BLAST results are available for this feature:
BLAST of EY659830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
HAT7_ARATH3.543e-1960.98Homeobox-leucine zipper protein HAT7 OS=Arabidopsi... [more]
ATB13_ARATH4.628e-1965.71Homeobox-leucine zipper protein ATHB-13 OS=Arabido... [more]
ATHB5_ARATH1.346e-1872.13Homeobox-leucine zipper protein ATHB-5 OS=Arabidop... [more]
ATHB6_ARATH1.758e-1861.64Homeobox-leucine zipper protein ATHB-6 OS=Arabidop... [more]
HOX21_ORYSJ3.918e-1868.66Homeobox-leucine zipper protein HOX21 OS=Oryza sat... [more]
HOX21_ORYSI3.918e-1868.66Homeobox-leucine zipper protein HOX21 OS=Oryza sat... [more]
ATB20_ARATH6.682e-1850.96Homeobox-leucine zipper protein ATHB-20 OS=Arabido... [more]
HOX13_ORYSJ1.944e-1765.57Homeobox-leucine zipper protein HOX13 OS=Oryza sat... [more]
HOX13_ORYSI1.944e-1765.57Homeobox-leucine zipper protein HOX13 OS=Oryza sat... [more]
HOX23_ORYSJ2.539e-1776.79Homeobox-leucine zipper protein HOX23 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659830 ID=EY659830; Name=EY659830; organism=Citrus sinensis; type=EST; length=940bp
GTCATCTTATTAACCGGNCCGGAATTCTTTCATAACACGCGCGTCCGTAN
GGGAATTAACAAAAAAAGATCCACTTCCACTTCCACTTCCACTTCCTCTT
CTTCTTGTCCTTTTTCCCCTCAAAAACTTCAAACTTCACACTTCTCCTGA
AACCTCTCACGAAACACTCTTTCAAATCCCTCTATTCTGAGTGATGGGTA
TGAGCAGCCGCTGCTCCCACACATCTCACATAACCGAGATCATAATCACC
AGCTTCTTTCGTCATAAGTCTTAAATTAAATTTCTTCTCGACTGTTGAAT
CATCGCATCATCTTTAGCGATGGCTGCTTAAAAGATTAAGAATATTAGTT
TTAAGTTAAATGGCGGGTGGGAGGATGTATAATCAAAATAGTTCTAGTGG
TGGTGGTAGTGGTGGTGGTACTTCAAGTCTGTCCTTTCTGATTCAAAGCC
AAAAGGGTTCTTGCTCTAACTCTCAGAATCTCGATGCTTCGTTCCTCTCT
GGCCCTTCTCCTTCTCCTTCTCCTTTTCTTGGATCAAGATCCATGGTGAG
CTTTGAAGATGTGCACTTAGCAAATGGATCCAATAACAGGCCATTTTTCC
GCCCATTTGATCGTGATGAAAATGGGGATGAGGACTTTGATGAGTACTTT
CATCAACCTGAAAAGAAAAGACGGCTTACGGTTGATCAAGTCCAGTTTCT
TGAAAAAAGCTTCGAGGTAGAGAACAAGCTTGAACCCCGAAGGGAAAATT
CACTGGCAAAAGACCTTGGCTTGCAGCCTAGACAGGTTGCGATTTGGTTC
CAAAACCGCCGGGCTCGTTGGAAGACTAACAGCTCGAGAAGGATACGATG
TATTGCAAACAGCTATAATAGCTTAGGGCGATATGACATCTCTTCAAGAG
AAGAAAGCTAAAGCTGAGGTCTTAGCTCACGACAGCTGCA
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