EY659830

Overview
NameEY659830
Unique NameEY659830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7614 contig Csv1_Contig7614:1..914. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: ATB12_ARATH (Homeobox-leucine zipper protein ATHB-12 OS=Arabidopsis thaliana GN=ATHB-12 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.905e-13
Identity = 35/71 (49.30%), Postives = 52/71 (73.24%), Query Frame = 3
Query:  666 KRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKTNS-SRRIRCIANSYNSL 875
            ++R + +Q++ LE  FE E +LEPR++  +A++LGLQPRQVAIWFQN+RARWKT    +    +  +YN+L
Sbjct:   31 QKRFSEEQIKSLELIFESETRLEPRKKVQVARELGLQPRQVAIWFQNKRARWKTKQLEKEYNTLRANYNNL 101          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: ATB22_ARATH (Homeobox-leucine zipper protein ATHB-22 OS=Arabidopsis thaliana GN=ATHB-22 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.956e-13
Identity = 35/73 (47.95%), Postives = 53/73 (72.60%), Query Frame = 3
Query:  630 EDFDEYFHQPEKKRRLTVDQVQFLEKSFEVE--------NKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWK 824
            E+ + +  Q +KK+++T +Q++FLE+SF+ E         KL P R+  L+K+LGLQPRQ+A+WFQNR+ARWK
Sbjct:   60 EESNSFNGQEKKKKKMTSEQLKFLERSFQEEIKLNPDRKMKLNPDRKMKLSKELGLQPRQIAVWFQNRKARWK 132          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: ATB54_ARATH (Homeobox-leucine zipper protein ATHB-54 OS=Arabidopsis thaliana GN=ATHB-54 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.472e-13
Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 3
Query:  627 DEDFDEYFHQPE--KKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKT 827
            +ED  E +   E  KKR+LT  Q++ LE+SFE E +LEP R+  LA+ LGLQP QVA+WFQNRRAR+KT
Sbjct:   54 EEDVCESYMMREITKKRKLTPIQLRLLEESFEEEKRLEPDRKLWLAEKLGLQPSQVAVWFQNRRARYKT 122          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: ATB40_ARATH (Homeobox-leucine zipper protein ATHB-40 OS=Arabidopsis thaliana GN=ATHB-40 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.472e-13
Identity = 35/54 (64.81%), Postives = 43/54 (79.63%), Query Frame = 3
Query:  663 KKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWK 824
            +KR+LT +QV  LE SF  E+KLE  R++ LA +LGL PRQVA+WFQNRRARWK
Sbjct:   56 RKRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWK 109          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSJ (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. japonica GN=HOX24 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.104e-12
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 3
Query:  660 EKKRRLTVDQVQFLEKSFEVEN-KLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKT 827
            E+KRR T +QV+ LE +F     KLEPR +  LA++LGLQPRQVAIWFQN+RARW++
Sbjct:   63 ERKRRFTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRS 119          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: HOX24_ORYSI (Homeobox-leucine zipper protein HOX24 OS=Oryza sativa subsp. indica GN=HOX24 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 1.104e-12
Identity = 35/57 (61.40%), Postives = 45/57 (78.95%), Query Frame = 3
Query:  660 EKKRRLTVDQVQFLEKSFEVEN-KLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKT 827
            E+KRR T +QV+ LE +F     KLEPR +  LA++LGLQPRQVAIWFQN+RARW++
Sbjct:   64 ERKRRFTEEQVRSLETTFHARRAKLEPREKAELARELGLQPRQVAIWFQNKRARWRS 120          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: ATB51_ARATH (Putative homeobox-leucine zipper protein ATHB-51 OS=Arabidopsis thaliana GN=ATHB-51 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.104e-12
Identity = 38/77 (49.35%), Postives = 54/77 (70.13%), Query Frame = 3
Query:  663 KKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKTNSSRRIRCIANSYNSLGR-YDI 890
            KK+RLT  Q+  LE+SF+ E KL+  R+  L+++LGLQPRQ+A+WFQNRRARWK     ++      Y+SL + YD+
Sbjct:   78 KKKRLTSGQLASLERSFQEEIKLDSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQL------YDSLRQEYDV 148          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSJ (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. japonica GN=HOX22 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.442e-12
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 3
Query:  660 EKKRRLTVDQVQFLEKSFEVEN-KLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKT 827
            E+KRR T +Q++ LE  F   + KLEPR +  LA++LGLQPRQVAIWFQN+RARW++
Sbjct:   72 ERKRRFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRS 128          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: HOX22_ORYSI (Homeobox-leucine zipper protein HOX22 OS=Oryza sativa subsp. indica GN=HOX22 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.442e-12
Identity = 34/57 (59.65%), Postives = 45/57 (78.95%), Query Frame = 3
Query:  660 EKKRRLTVDQVQFLEKSFEVEN-KLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKT 827
            E+KRR T +Q++ LE  F   + KLEPR +  LA++LGLQPRQVAIWFQN+RARW++
Sbjct:   72 ERKRRFTEEQIRSLESMFHAHHAKLEPREKAELARELGLQPRQVAIWFQNKRARWRS 128          
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: ATB53_ARATH (Homeobox-leucine zipper protein ATHB-53 OS=Arabidopsis thaliana GN=ATHB-53 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.212e-12
Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 3
Query:  663 KKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWK 824
            +KR+LT +QV  LE SF  E+KLE  R+  +A +LGL PRQVA+WFQNRRARWK
Sbjct:   71 RKRKLTDEQVNMLEYSFGNEHKLESGRKEKIAGELGLDPRQVAVWFQNRRARWK 124          
The following BLAST results are available for this feature:
BLAST of EY659830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ATB12_ARATH2.905e-1349.30Homeobox-leucine zipper protein ATHB-12 OS=Arabido... [more]
ATB22_ARATH4.956e-1347.95Homeobox-leucine zipper protein ATHB-22 OS=Arabido... [more]
ATB54_ARATH6.472e-1357.97Homeobox-leucine zipper protein ATHB-54 OS=Arabido... [more]
ATB40_ARATH6.472e-1364.81Homeobox-leucine zipper protein ATHB-40 OS=Arabido... [more]
HOX24_ORYSJ1.104e-1261.40Homeobox-leucine zipper protein HOX24 OS=Oryza sat... [more]
HOX24_ORYSI1.104e-1261.40Homeobox-leucine zipper protein HOX24 OS=Oryza sat... [more]
ATB51_ARATH1.104e-1249.35Putative homeobox-leucine zipper protein ATHB-51 O... [more]
HOX22_ORYSJ1.442e-1259.65Homeobox-leucine zipper protein HOX22 OS=Oryza sat... [more]
HOX22_ORYSI1.442e-1259.65Homeobox-leucine zipper protein HOX22 OS=Oryza sat... [more]
ATB53_ARATH3.212e-1262.96Homeobox-leucine zipper protein ATHB-53 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659830 ID=EY659830; Name=EY659830; organism=Citrus sinensis; type=EST; length=940bp
GTCATCTTATTAACCGGNCCGGAATTCTTTCATAACACGCGCGTCCGTAN
GGGAATTAACAAAAAAAGATCCACTTCCACTTCCACTTCCACTTCCTCTT
CTTCTTGTCCTTTTTCCCCTCAAAAACTTCAAACTTCACACTTCTCCTGA
AACCTCTCACGAAACACTCTTTCAAATCCCTCTATTCTGAGTGATGGGTA
TGAGCAGCCGCTGCTCCCACACATCTCACATAACCGAGATCATAATCACC
AGCTTCTTTCGTCATAAGTCTTAAATTAAATTTCTTCTCGACTGTTGAAT
CATCGCATCATCTTTAGCGATGGCTGCTTAAAAGATTAAGAATATTAGTT
TTAAGTTAAATGGCGGGTGGGAGGATGTATAATCAAAATAGTTCTAGTGG
TGGTGGTAGTGGTGGTGGTACTTCAAGTCTGTCCTTTCTGATTCAAAGCC
AAAAGGGTTCTTGCTCTAACTCTCAGAATCTCGATGCTTCGTTCCTCTCT
GGCCCTTCTCCTTCTCCTTCTCCTTTTCTTGGATCAAGATCCATGGTGAG
CTTTGAAGATGTGCACTTAGCAAATGGATCCAATAACAGGCCATTTTTCC
GCCCATTTGATCGTGATGAAAATGGGGATGAGGACTTTGATGAGTACTTT
CATCAACCTGAAAAGAAAAGACGGCTTACGGTTGATCAAGTCCAGTTTCT
TGAAAAAAGCTTCGAGGTAGAGAACAAGCTTGAACCCCGAAGGGAAAATT
CACTGGCAAAAGACCTTGGCTTGCAGCCTAGACAGGTTGCGATTTGGTTC
CAAAACCGCCGGGCTCGTTGGAAGACTAACAGCTCGAGAAGGATACGATG
TATTGCAAACAGCTATAATAGCTTAGGGCGATATGACATCTCTTCAAGAG
AAGAAAGCTAAAGCTGAGGTCTTAGCTCACGACAGCTGCA
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