EY659830

Overview
NameEY659830
Unique NameEY659830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length940
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7614 contig Csv1_Contig7614:1..914. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: ATB52_ARATH (Homeobox-leucine zipper protein ATHB-52 OS=Arabidopsis thaliana GN=ATHB-52 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.594e-11
Identity = 36/67 (53.73%), Postives = 44/67 (65.67%), Query Frame = 3 
Query:  663 KKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKTNSSRRIRCIANS 863
            KK+RLT DQV+ LEK F +  KLEP  +  L+  LGL  RQVA+WFQN+RAR+KT S     C   S
Sbjct:   11 KKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRARFKTQSLEVQHCTLQS 77
[Close]
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSJ (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. japonica GN=HOX14 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.551e-11
Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 3 
Query:  663 KKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKT 827
            KKRRL+ +QV+ LE SF  E KLE  R+  LA +LGL P+QVA+WFQNRRAR K+
Sbjct:   62 KKRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKS 116
[Close]
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: HOX14_ORYSI (Homeobox-leucine zipper protein HOX14 OS=Oryza sativa subsp. indica GN=HOX14 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.551e-11
Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 3 
Query:  663 KKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWKT 827
            KKRRL+ +QV+ LE SF  E KLE  R+  LA +LGL P+QVA+WFQNRRAR K+
Sbjct:   62 KKRRLSDEQVEMLELSFREERKLETGRKVHLASELGLDPKQVAVWFQNRRARHKS 116
[Close]
BLAST of EY659830 vs. ExPASy Swiss-Prot
Match: HAT14_ARATH (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana GN=HAT14 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 7.912e-11
Identity = 38/84 (45.24%), Postives = 51/84 (60.71%), Query Frame = 3 
Query:  579 SNNRPFFRPFDRDEN--GDEDFDEYFHQPEKKRRLTVDQVQFLEKSFEVENKLEPRRENSLAKDLGLQPRQVAIWFQNRRARWK 824
            SN R      +R  +   +ED D+      KK RL+ DQ  FLE SF+  + L P+++ +LAK L L+PRQV +WFQNRRAR K
Sbjct:  160 SNKRDIDDEVERSASRASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAKQLNLRPRQVEVWFQNRRARTK 243
The following BLAST results are available for this feature:
BLAST of EY659830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
ATB52_ARATH1.594e-1153.73Homeobox-leucine zipper protein ATHB-52 OS=Arabido... [more]
HOX14_ORYSJ3.551e-1161.82Homeobox-leucine zipper protein HOX14 OS=Oryza sat... [more]
HOX14_ORYSI3.551e-1161.82Homeobox-leucine zipper protein HOX14 OS=Oryza sat... [more]
HAT14_ARATH7.912e-1145.24Homeobox-leucine zipper protein HAT14 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-E11-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659830 ID=EY659830; Name=EY659830; organism=Citrus sinensis; type=EST; length=940bp
GTCATCTTATTAACCGGNCCGGAATTCTTTCATAACACGCGCGTCCGTAN
GGGAATTAACAAAAAAAGATCCACTTCCACTTCCACTTCCACTTCCTCTT
CTTCTTGTCCTTTTTCCCCTCAAAAACTTCAAACTTCACACTTCTCCTGA
AACCTCTCACGAAACACTCTTTCAAATCCCTCTATTCTGAGTGATGGGTA
TGAGCAGCCGCTGCTCCCACACATCTCACATAACCGAGATCATAATCACC
AGCTTCTTTCGTCATAAGTCTTAAATTAAATTTCTTCTCGACTGTTGAAT
CATCGCATCATCTTTAGCGATGGCTGCTTAAAAGATTAAGAATATTAGTT
TTAAGTTAAATGGCGGGTGGGAGGATGTATAATCAAAATAGTTCTAGTGG
TGGTGGTAGTGGTGGTGGTACTTCAAGTCTGTCCTTTCTGATTCAAAGCC
AAAAGGGTTCTTGCTCTAACTCTCAGAATCTCGATGCTTCGTTCCTCTCT
GGCCCTTCTCCTTCTCCTTCTCCTTTTCTTGGATCAAGATCCATGGTGAG
CTTTGAAGATGTGCACTTAGCAAATGGATCCAATAACAGGCCATTTTTCC
GCCCATTTGATCGTGATGAAAATGGGGATGAGGACTTTGATGAGTACTTT
CATCAACCTGAAAAGAAAAGACGGCTTACGGTTGATCAAGTCCAGTTTCT
TGAAAAAAGCTTCGAGGTAGAGAACAAGCTTGAACCCCGAAGGGAAAATT
CACTGGCAAAAGACCTTGGCTTGCAGCCTAGACAGGTTGCGATTTGGTTC
CAAAACCGCCGGGCTCGTTGGAAGACTAACAGCTCGAGAAGGATACGATG
TATTGCAAACAGCTATAATAGCTTAGGGCGATATGACATCTCTTCAAGAG
AAGAAAGCTAAAGCTGAGGTCTTAGCTCACGACAGCTGCA
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