EY659824

Overview
NameEY659824
Unique NameEY659824
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8146 contig Csv1_Contig8146:145..1049. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA_PINSY (Glutamine synthetase cytosolic isozyme OS=Pinus sylvestris PE=2 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.859e-102
Identity = 170/245 (69.39%), Postives = 202/245 (82.45%), Query Frame = 2
Query:  116 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL-VLFSH*SKPIEGDWNGAGC 847
            L DLLNLD++  T+K+IAEYIWIGG+G+DMRSK++++S PV    ELPKWNYDGSSTGQA G DSEVILYPQAIF+DPFR G +ILVICD Y+P G  IP+NKR  AA+IF+   VS E  W+G+EQEYTLLQ++VKWPLGWP+G YPGPQGPYYCG GADK++GRDI DAHYKACLY+GINISG NGE MPGQW +QVGPSVGI A D +W +R+++ER   +  V+ S   KPIEGDWNGAGC
Sbjct:    5 LTDLLNLDLSDVTEKVIAEYIWIGGSGMDMRSKARSLSGPVSSVKELPKWNYDGSSTGQAQGHDSEVILYPQAIFRDPFRRGKHILVICDAYSPNGTAIPSNKRAAAAKIFNEKAVSDEETWYGLEQEYTLLQKDVKWPLGWPIGGYPGPQGPYYCGVGADKAWGRDIVDAHYKACLYSGINISGINGEVMPGQWEFQVGPSVGISAADELWCARFIMERITEKAGVVLSFDPKPIEGDWNGAGC 249          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLN15_ARATH (Glutamine synthetase cytosolic isozyme 1-5 OS=Arabidopsis thaliana GN=GLN1-5 PE=2 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 1.205e-101
Identity = 168/244 (68.85%), Postives = 205/244 (84.02%), Query Frame = 2
Query:  116 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL--VLFSH*SKPIEGDWNGA 841
            L DLLNLD++  T KIIAEYIWIGG+G+D+RSK++T+  PV +P++LPKWNYDGSST QA G+DSEVILYPQAIFKDPFR GNNILV+CD Y PAG+PIPTN RH+A +IF +  V AE PWFGIEQEYTLL+++VKWPLGWP+G +PGPQGPYYC  GADK+FGRDI DAHYKACLY+G++I G NGE MPGQW +Q+ P+VGI AGD +W +RY+LER + ++  V+ S   KPI+GDWNGA
Sbjct:    5 LSDLLNLDLSD-TKKIIAEYIWIGGSGMDIRSKARTLPGPVSNPTKLPKWNYDGSSTDQAAGDDSEVILYPQAIFKDPFRKGNNILVMCDAYRPAGDPIPTNNRHKAVKIFDHPNVKAEEPWFGIEQEYTLLKKDVKWPLGWPLGGFPGPQGPYYCAVGADKAFGRDIVDAHYKACLYSGLSIGGANGEVMPGQWEFQISPTVGIGAGDQLWVARYILER-ITEICGVIVSFDPKPIQGDWNGA 246          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA1_DAUCA (Glutamine synthetase cytosolic isozyme OS=Daucus carota GN=GLN1 PE=2 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 2.684e-101
Identity = 174/245 (71.02%), Postives = 205/245 (83.67%), Query Frame = 2
Query:  116 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL--VLFSH*SKPIEGDWNGAG 844
            L DL+NLD++  TDK IAEYIWI   G  +RSK++T+S PV+ P++LPKWN+DGSSTGQ PG+DSEVI+YPQAIFKDPFR GN+ILV+CDTYTPAGEPIPTNKR  AA+IFS+  V+AEVPWFGIEQEYTLL++ V  P+G P G YPGPQGPYYCG GADK+FGRDI DAHYKACLYAGINISG NGE MPGQW +QVGP+VGI AGD +W +RY+LER + ++  V+ S   KPI GDWNGAG
Sbjct:    4 LTDLINLDLSDTTDKFIAEYIWIDAVG-GLRSKARTLSGPVDDPTKLPKWNFDGSSTGQGPGDDSEVIIYPQAIFKDPFRRGNHILVMCDTYTPAGEPIPTNKRCNAAKIFSHPDVAAEVPWFGIEQEYTLLKKEVNCPIGCPTGGYPGPQGPYYCGIGADKAFGRDIVDAHYKACLYAGINISGINGEVMPGQWEFQVGPAVGISAGDELWVARYILER-ITEIAGVVVSLDPKPIPGDWNGAG 246          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA2_MAIZE (Glutamine synthetase root isozyme 2 OS=Zea mays GN=GLN2 PE=2 SV=1)

HSP 1 Score: 367.466 bits (942), Expect = 5.979e-101
Identity = 171/245 (69.80%), Postives = 206/245 (84.08%), Query Frame = 2
Query:  116 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL--VLFSH*SKPIEGDWNGAG 844
            L DL+NLD++  T KIIAEYIW+GG+G+D+RSK++T+S PV+ PS+LPKWN+DGSSTGQAPG+DSEVIL P+AIF+DPFR G NILV+CD Y P GEPIP+NKRH AA+IFS+  V AE PWFGIEQEYTLLQ++ KWPLGWP+ AYPGPQGPYYC AGADKS+GRDI D  YKACLYAGI+ISG NGE MPGQW +QV P+VG+ AGD +W +RY+LER + ++  V+ S   KPI GDWNGAG
Sbjct:    4 LSDLINLDLSGRTGKIIAEYIWVGGSGMDVRSKARTLSGPVDDPSKLPKWNFDGSSTGQAPGDDSEVILCPRAIFRDPFRKGQNILVMCDCYEPNGEPIPSNKRHGAAKIFSHPDVKAEEPWFGIEQEYTLLQKDTKWPLGWPL-AYPGPQGPYYCAAGADKSYGRDIVDCAYKACLYAGIDISGINGEVMPGQWEFQVAPAVGVSAGDQLWVARYILER-ITEIAGVVVSFDPKPIPGDWNGAG 246          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA1_CHLRE (Glutamine synthetase cytosolic isozyme OS=Chlamydomonas reinhardtii GN=GLN1 PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 2.611e-80
Identity = 144/246 (58.54%), Postives = 168/246 (68.29%), Query Frame = 2
Query:  140 ITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTP----------AGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL-VLFSH*SKPIEGDWNGAG 844
            +T    KI AEY+WIGG+  D+RSKS+T+S     P +LP WNYDGSSTGQAPG DSEV L P++IFKDPFRGG+NILV+CD Y P          A +PIPTN R   AE+   +K   E PWFGIEQEYTLL    KWPLGWP G YP PQGPYYC AGA  + GRD+A+ HY+ CL AG+NISG N E +P QW YQVGP  GI  GDH+W SRY++ R      V  S   KPI GDWNG+G
Sbjct:   31 VTDQQGKICAEYVWIGGSMHDVRSKSRTLSTIPTKPEDLPHWNYDGSSTGQAPGHDSEVYLIPRSIFKDPFRGGDNILVMCDCYEPPKVNPDGTLAAPKPIPTNTRFACAEVMEKAK--KEEPWFGIEQEYTLLNAITKWPLGWPKGGYPAPQGPYYCSAGAGVAIGRDVAEVHYRLCLAAGVNISGVNAEVLPSQWEYQVGPCEGITMGDHMWMSRYIMYRVCEMFNVEVSFDPKPIPGDWNGSG 274          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA_HEBCY (Glutamine synthetase OS=Hebeloma cylindrosporum GN=GLN1 PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.937e-75
Identity = 137/235 (58.30%), Postives = 164/235 (69.79%), Query Frame = 2
Query:  146 PYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQ-LVLFSH*SKPIEGDWNGAGC 847
            P  DKI AEY+W+ G G  +RSK+ T+SK V     L  W++DGSST QAPG DS+V L P AIFKDPFRGG+NILV+ +TY   G P  TN RH AA++   +K   +VPWFG+EQEYTL   +   P GWP G +PGPQGPYYCGAG  K F RD+ +AHY+ACLY+GINISG N E MP QW +QVGP  GI  GDH+W +RYLL R   Q  V  S   KP++GDWNGAGC
Sbjct:   17 PQGDKIQAEYVWVDGDG-GLRSKTTTVSKKVTDIGSLRIWDFDGSSTNQAPGHDSDVYLRPAAIFKDPFRGGDNILVLAETYNSDGTPNRTNFRHHAAKVMEQAK--EDVPWFGLEQEYTLFDADGS-PYGWPKGGFPGPQGPYYCGAGTGKVFARDLIEAHYRACLYSGINISGINAEVMPSQWEFQVGPCEGISMGDHLWMARYLLVRIAEQWAVKVSFHPKPLQGDWNGAGC 247          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA_AGABI (Glutamine synthetase OS=Agaricus bisporus GN=glnA PE=3 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 8.137e-74
Identity = 135/232 (58.19%), Postives = 162/232 (69.83%), Query Frame = 2
Query:  155 DKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL-VLFSH*SKPIEGDWNGAGC 847
            DKI AEY+WI G G  +R K+ T+SK V    +L  W++DGSST QAPG DS+V L P AIFKDPFRGG+NILV+ +TY   G P  TN RH A ++F  +K     PWFG+EQEYTL   + + P GWP G +PGPQGPYYCGAG  K F RD+ +AHY+ACLYAGINISG N E MP QW +QVGP  GI  GDH+W +RYLL R   Q  V  S   KP++G+WNGAGC
Sbjct:   20 DKIQAEYVWIDGDG-GLRCKTTTVSKKVTDIGQLRIWDFDGSSTNQAPGHDSDVYLRPAAIFKDPFRGGDNILVLAETYNNDGTPNRTNHRHHAKKVFDEAK--EHEPWFGLEQEYTLFDADDQ-PYGWPKGGFPGPQGPYYCGAGTGKVFARDLIEAHYRACLYAGINISGINAEVMPSQWEFQVGPCEGISMGDHLWMARYLLVRIAEQWGVKVSFHPKPLKGEWNGAGC 247          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA2_DROME (Glutamine synthetase 2 cytoplasmic OS=Drosophila melanogaster GN=Gs2 PE=2 SV=3)

HSP 1 Score: 271.937 bits (694), Expect = 3.419e-72
Identity = 133/235 (56.60%), Postives = 160/235 (68.09%), Query Frame = 2
Query:  146 PYTDKII-AEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQLVLFSH*S-KPIEGDWNGAG 844
            P  + I+ A Y+WI GTG D+R K +T+    + P ELP WNYDGSS  QA G +S+  LYP AI+KDPFR GNNILV+CDTY   G P  TNKR    E+ +  K +AE PWFGIEQEYT L  +   PLGWP   +PGPQGPYYCG GA+K + RDI DAHY+ACLYAGI +SGTN E MP QW +QVGP  GI  GD +W +R+LL R   +  + S    KP+ GDWNGAG
Sbjct:   26 PLQENIVQATYVWIDGTGEDLRCKDRTLDFIPQSPKELPVWNYDGSSCYQAEGSNSDTYLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCLEVAN--KCAAEEPWFGIEQEYTFLDFDGH-PLGWPKNGFPGPQGPYYCGVGANKVYARDIVDAHYRACLYAGIKVSGTNAEVMPAQWEFQVGPCEGISIGDDLWMARFLLHRISEEFGIVSTLDPKPMPGDWNGAG 257          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA_SUIBO (Glutamine synthetase OS=Suillus bovinus GN=GLNA PE=3 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 7.616e-72
Identity = 131/232 (56.47%), Postives = 160/232 (68.97%), Query Frame = 2
Query:  155 DKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL-VLFSH*SKPIEGDWNGAGC 847
            DK+ AEY+WI G G  +RSK+ T++K      +L  W++DGSST QAPG DS+V L P AIFKDPFRGG+NILV+ +T+   G P  TN RH   ++   +K S  VPWFG+EQEYTL   +   P GWP G +PGPQGPYYCGAG  K F RD+ +AHY+ACLYAG+NISG N E MP QW +QVGP  GI  GDH+W +RYLL R   Q  +  S   KP+ GDWNGAGC
Sbjct:   20 DKVQAEYVWIDGDG-GLRSKTMTMTKKTTDIGQLRIWDFDGSSTNQAPGGDSDVYLRPAAIFKDPFRGGDNILVLAETFNNDGTPNRTNHRHHTKKVMDLAKDS--VPWFGLEQEYTLFDADGT-PFGWPKGGFPGPQGPYYCGAGTGKVFARDLIEAHYRACLYAGVNISGINAEVMPSQWEFQVGPCEGISMGDHLWMARYLLVRIAEQWGIKVSFHPKPLAGDWNGAGC 247          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA_PANAR (Glutamine synthetase OS=Panulirus argus PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.936e-71
Identity = 133/256 (51.95%), Postives = 174/256 (67.97%), Query Frame = 2
Query:  116 LEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL-VLFSH*SKPIEGDWNGAGCPPISVXESQKG 880
            L+  L LDI     K  A YIW+ GTG ++RSK++T++   + PSELP WN+DGSSTGQA   +S+V LYP A+++DPFR GNN LV+C+TY    +P  TN+R +  E+ +  + + + PWFG+EQEYTLL  + K PLGWP   YPGPQGPYYCG GA++ +GRD+ +AHY+ACL AGINISG N + MP QW +QVGP  GI  GD +W +RYLL R      V+ +   KPI GDWNGAG       E+ +G
Sbjct:   10 LDRYLRLDIPD--QKCQAMYIWVDGTGENLRSKTRTLNFTPKSPSELPIWNFDGSSTGQAERSNSDVYLYPVAVYRDPFRLGNNKLVLCETYKYNKKPADTNQRWKCMEVMT--RAADQHPWFGMEQEYTLLDID-KHPLGWPKNGYPGPQGPYYCGVGANRVYGRDVVEAHYRACLCAGINISGENAKVMPAQWEFQVGPCEGITMGDDLWMARYLLHRVAEDFDVVVTLDPKPIPGDWNGAGMHTNFSTEAMRG 260          
The following BLAST results are available for this feature:
BLAST of EY659824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA_PINSY1.859e-10269.39Glutamine synthetase cytosolic isozyme OS=Pinus sy... [more]
GLN15_ARATH1.205e-10168.85Glutamine synthetase cytosolic isozyme 1-5 OS=Arab... [more]
GLNA1_DAUCA2.684e-10171.02Glutamine synthetase cytosolic isozyme OS=Daucus c... [more]
GLNA2_MAIZE5.979e-10169.80Glutamine synthetase root isozyme 2 OS=Zea mays GN... [more]
GLNA1_CHLRE2.611e-8058.54Glutamine synthetase cytosolic isozyme OS=Chlamydo... [more]
GLNA_HEBCY1.937e-7558.30Glutamine synthetase OS=Hebeloma cylindrosporum GN... [more]
GLNA_AGABI8.137e-7458.19Glutamine synthetase OS=Agaricus bisporus GN=glnA ... [more]
GLNA2_DROME3.419e-7256.60Glutamine synthetase 2 cytoplasmic OS=Drosophila m... [more]
GLNA_SUIBO7.616e-7256.47Glutamine synthetase OS=Suillus bovinus GN=GLNA PE... [more]
GLNA_PANAR4.936e-7151.95Glutamine synthetase OS=Panulirus argus PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659824 ID=EY659824; Name=EY659824; organism=Citrus sinensis; type=EST; length=902bp
TCATCATCAGACGCGTCCGGCAATGGCCTTTCAAAAAAGAGGGAAAGGAA
CAAATAGGAGTTCTGCCAAGTTTAGAGTGCTTGTTTTGACATCTAAAGAC
AGCACTGTCAATAGGCTAGAGGATCTACTCAATTTGGACATCACTCCATA
TACTGACAAAATCATTGCCGAATATATTTGGATTGGAGGTACTGGGATTG
ATATGCGTAGCAAGTCAAAGACCATTTCAAAGCCTGTTGAGCATCCATCT
GAGCTTCCCAAGTGGAATTATGATGGATCAAGTACTGGACAGGCACCTGG
TGAAGATAGTGAAGTAATTTTATACCCTCAAGCAATTTTTAAGGACCCCT
TCCGTGGAGGAAACAACATCTTGGTAATTTGTGATACCTACACACCAGCA
GGCGAGCCCATCCCTACAAACAAACGCCATAGGGCTGCTGAAATTTTCAG
TAACTCGAAAGTGTCTGCTGAAGTTCCATGGTTTGGGATAGAGCAAGAGT
ACACCTTACTTCAACAAAATGTGAAATGGCCTCTGGGTTGGCCTGTTGGA
GCCTATCCTGGTCCCCAGGGTCCTTATTACTGTGGAGCTGGGGCTGATAA
GTCGTTTGGCCGTGACATTGCAGATGCTCATTACAAGGCTTGCTTGTATG
CTGGCATTAACATTAGTGGCACCAACGGGGAGGGTATGCCTGGCCAGTGG
GGATATCAAGTTGGTCCCAGTGTAGGCATTGATGCTGGAGATCATATATG
GGGGTCGAGATACCTTCTTGAGAGATCACTGAACCAGCTGGTGTTGTTCT
CTCACTGATCCAAACCAATTGAGGGAGACTGGAATGGTGCTGGATGCCCC
CCCATTTCCGTNCNAGAGTCCCAGAAAGGAAGGAGGTTTGAAACTTATAG
AA
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