EY659824

Overview
NameEY659824
Unique NameEY659824
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length902
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8146 contig Csv1_Contig8146:145..1049. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA_PIG (Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV=3)

HSP 1 Score: 256.914 bits (655), Expect = 1.138e-67
Identity = 121/235 (51.49%), Postives = 157/235 (66.81%), Query Frame = 2
Query:  146 PYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL-VLFSH*SKPIEGDWNGAGC 847
            P  +K+ A YIWI GTG  +R K++T+    +   ELP+WN+DGSST Q+ G +S++ L P A+F+DPFR   N LV C+ +    +P  TN RH    I     VS + PWFG+EQEYTL+  +   P GWP   +PGPQGPYYCG GADK++GRDI +AHY+ACLYAGI I GTN E MP QW +Q+GP  GID GDH+W +R++L R      V+ +   KPI G+WNGAGC
Sbjct:   21 PQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCIEELPEWNFDGSSTFQSEGSNSDMYLVPAAMFRDPFRKDPNKLVFCEVFKYNRKPAETNLRHTCKRIMD--MVSNQHPWFGMEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKIGGTNAEVMPAQWEFQIGPCEGIDMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGC 252          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA_SQUAC (Glutamine synthetase, mitochondrial OS=Squalus acanthias PE=2 SV=1)

HSP 1 Score: 256.529 bits (654), Expect = 1.486e-67
Identity = 122/235 (51.91%), Postives = 158/235 (67.23%), Query Frame = 2
Query:  146 PYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL-VLFSH*SKPIEGDWNGAGC 847
            P   K+ A YIWI GTG  +R K++T+    +  +ELP+WN+DGSST Q+ G +S++ L P A+F+DPFR   N LV+C+      +P  +N RH   +I S   ++ E PWFG+EQEYTLL  +   P GWP   +PGPQGPYYCG GADK++GRDI +AHY+ACLYAGI +SGTN E M  QW YQVGP  GI  GDH+W SR++L R      ++ S   KPI G+WNGAGC
Sbjct:   50 PQDGKVQAMYIWIDGTGEAVRCKTRTLDNEPKSIAELPEWNFDGSSTYQSEGSNSDMYLVPSAMFRDPFRRDPNKLVLCEVLKYNRKPAESNLRHSCQKIMS--MIANEYPWFGMEQEYTLLGTDGH-PFGWPSNCFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIELSGTNAEVMAAQWEYQVGPCEGIQMGDHLWISRFILHRVCEDFGIIASFDPKPIPGNWNGAGC 281          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA_YARLI (Glutamine synthetase OS=Yarrowia lipolytica GN=GLN1 PE=3 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.941e-67
Identity = 122/235 (51.91%), Postives = 155/235 (65.96%), Query Frame = 2
Query:  146 PYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL-VLFSH*SKPIEGDWNGAGC 847
            P    ++AEYIWI     ++RSK KT+ K      +LP+WN+DGSST QAPG DS++ L P AI+ DPFR G+NI+V+ + +   G P   N RH  A++ S  +   EV WFGIEQEYT+  ++   P+GWP G +P PQGPYYCG G  K F RD+ +AHY+ACLY+GINISG N E MP QW YQVGP  GI   D +W SRYLL R   +  +  S   KP++GDWNGAGC
Sbjct:   10 PQHGAVLAEYIWIDAH-FNIRSKCKTLDKKPTSIEDLPEWNFDGSSTDQAPGHDSDIYLRPAAIYPDPFRRGDNIIVLAECWNNDGTPNKFNHRHECAKLMSAHE--KEVIWFGIEQEYTMFDESDN-PVGWPKGGFPAPQGPYYCGVGTGKVFARDVVEAHYRACLYSGINISGINAEVMPSQWEYQVGPCEGISMADELWMSRYLLHRVAEEFGIKISFHPKPLQGDWNGAGC 240          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA_SCHPO (Glutamine synthetase OS=Schizosaccharomyces pombe GN=gln1 PE=1 SV=2)

HSP 1 Score: 256.144 bits (653), Expect = 1.941e-67
Identity = 132/262 (50.38%), Postives = 165/262 (62.98%), Query Frame = 2
Query:   65 AKFRVLVLTSKDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL-VLFSH*SKPIEGDWNGAGC 847
            +++ V  L SK + +N+  DL      P   K++AEYIWI G    +RSK+ T+        +L  WN+DGSSTGQAPG +S+ +L P A++ DPFR G+NILV+   YT  G P   N R   A++    K + +  WFGIEQEYT+L    + P GWP G +PGPQGP+YCG G  + F RDI +AHYKACLYAGINISG N E MP QW YQVGP  GI+ GD +W SR+LL R      V  S   KPI GDWNGAGC
Sbjct:    2 SQYDVEPLLSKAAILNKYADL------PQNGKVMAEYIWIDGFN-HLRSKTMTLDAKPSSIDQLRVWNFDGSSTGQAPGNNSDTLLKPVAMYNDPFRRGDNILVLAACYTADGSPNGFNHRDACAKLLE--KHADKETWFGIEQEYTMLDYYDR-PFGWPKGGFPGPQGPFYCGVGTGRVFARDIVEAHYKACLYAGINISGINAEVMPSQWEYQVGPCAGIEMGDQLWMSRFLLHRIAEDFGVKISFHPKPILGDWNGAGC 253          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA_CHICK (Glutamine synthetase OS=Gallus gallus GN=GLUL PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.311e-67
Identity = 121/235 (51.49%), Postives = 157/235 (66.81%), Query Frame = 2
Query:  146 PYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL-VLFSH*SKPIEGDWNGAGC 847
            P  +K+ A YIWI GTG  +R K++T+    +   +LP+WN+DGSST QA G +S++ L P A+F+DPFR   N LV+C+ +    +   TN RH    I     VS + PWFG+EQEYTLL  +   P GWP   +PGPQGPYYCG GADK++GRDI +AHY+ACLYAG+ I GTN E MP QW +QVGP  GI+ GDH+W +R++L R      V+ S   KPI G+WNGAGC
Sbjct:   21 PQGEKVQAMYIWIDGTGEHLRCKTRTLDHEPKSLEDLPEWNFDGSSTFQAEGSNSDMYLRPAAMFRDPFRKDPNKLVLCEVFKYNRQSADTNLRHTCRRIMD--MVSNQHPWFGMEQEYTLLGTDGH-PFGWPSNCFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGVKIGGTNAEVMPAQWEFQVGPCEGIEMGDHLWIARFILHRVCEDFGVIVSFDPKPIPGNWNGAGC 252          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA_RAT (Glutamine synthetase OS=Rattus norvegicus GN=Glul PE=1 SV=3)

HSP 1 Score: 254.218 bits (648), Expect = 7.377e-67
Identity = 123/254 (48.43%), Postives = 168/254 (66.14%), Query Frame = 2
Query:   89 TSKDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL-VLFSH*SKPIEGDWNGAGC 847
            TS  S +N+    + +++ P  +KI   YIW+ GTG  +R K++T+    +   ELP+WN+DGSST Q+ G +S++ L+P A+F+DPFR   N LV C+ +    +P  TN RH    I     VS++ PWFG+EQEYTL+  +   P GWP   +PGPQGPYYCG GADK++GRDI +AHY+ACLYAGI I+GTN E MP QW +Q+GP  GI  GDH+W +R++L R      V+ +   KPI G+WNGAGC
Sbjct:    3 TSASSHLNKGIKQMYMNL-PQGEKIQLMYIWVDGTGEGLRCKTRTLDCDPKCVEELPEWNFDGSSTFQSEGSNSDMYLHPVAMFRDPFRRDPNKLVFCEVFKYNRKPAETNLRHSCKRIMD--MVSSQHPWFGMEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGC 252          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA_HUMAN (Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 SV=4)

HSP 1 Score: 253.832 bits (647), Expect = 9.634e-67
Identity = 118/235 (50.21%), Postives = 157/235 (66.81%), Query Frame = 2
Query:  146 PYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL-VLFSH*SKPIEGDWNGAGC 847
            P  +K+ A YIWI GTG  +R K++T+    +   ELP+WN+DGSST Q+ G +S++ L P A+F+DPFR   N LV+C+ +     P  TN RH    I     VS + PWFG+EQEYTL+  +   P GWP   +PGPQGPYYCG GAD+++GRDI +AHY+ACLYAG+ I+GTN E MP QW +Q+GP  GI  GDH+W +R++L R      V+ +   KPI G+WNGAGC
Sbjct:   21 PQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCVEELPEWNFDGSSTLQSEGSNSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMD--MVSNQHPWFGMEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGC 252          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA_MOUSE (Glutamine synthetase OS=Mus musculus GN=Glul PE=1 SV=6)

HSP 1 Score: 253.447 bits (646), Expect = 1.258e-66
Identity = 122/254 (48.03%), Postives = 168/254 (66.14%), Query Frame = 2
Query:   89 TSKDSTVNRLEDLLNLDITPYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL-VLFSH*SKPIEGDWNGAGC 847
            TS  S +N+    + + + P  +K+ A YIW+ GTG  +R K++T+    +   ELP+WN+DGSST Q+ G +S++ L+P A+F+DPFR   N LV+C+ +    +P  TN RH    I     VS + PWFG+EQEYTL+  +   P GWP   +PGPQGPYYCG GADK++GRDI +AHY+ACLYAG+ I+GTN E MP QW +Q+GP  GI  GDH+W +R++L R      V+ +   KPI G+WNGAGC
Sbjct:    3 TSASSHLNKGIKQMYMSL-PQGEKVQAMYIWVDGTGEGLRCKTRTLDCEPKCVEELPEWNFDGSSTFQSEGSNSDMYLHPVAMFRDPFRKDPNKLVLCEVFKYNRKPAETNLRHICKRIMD--MVSNQHPWFGMEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGVKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWIARFILHRVCEDFGVIATFDPKPIPGNWNGAGC 252          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA_KLULA (Glutamine synthetase OS=Kluyveromyces lactis GN=GLN1 PE=3 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.258e-66
Identity = 124/230 (53.91%), Postives = 155/230 (67.39%), Query Frame = 2
Query:  161 IIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGEPIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL-VLFSH*SKPIEGDWNGAGC 847
            IIAEY+WI   G  +RSK +T++K V     LP+WN+DGSSTGQAPG DS++ L P A + DPFR G+NI+V+ + +   G P   N RH AA++F   K  AE+ WFG+EQEYTL  Q  +   GWP G +P PQGPYYCG GA K F RD+ +AHY+ACLYAG+NISG N E MP QW +QVGP  GI   D +W +RY L R   +  V  S   KP++GDWNGAGC
Sbjct:   26 IIAEYVWIDSEG-GLRSKGRTLNKKVTSVDSLPEWNFDGSSTGQAPGHDSDIYLKPVAFYPDPFRRGDNIVVLAECWNNDGTPNKFNHRHEAAKLFEAHK-DAEM-WFGLEQEYTLFDQYDQ-VYGWPKGGFPAPQGPYYCGVGAGKVFARDVIEAHYRACLYAGVNISGINAEVMPSQWEFQVGPCEGIAMADQLWIARYFLHRVAEEFGVKVSLHPKPLKGDWNGAGC 251          
BLAST of EY659824 vs. ExPASy Swiss-Prot
Match: GLNA_MACFA (Glutamine synthetase OS=Macaca fascicularis GN=GLUL PE=2 SV=3)

HSP 1 Score: 251.906 bits (642), Expect = 3.661e-66
Identity = 119/236 (50.42%), Postives = 159/236 (67.37%), Query Frame = 2
Query:  146 PYTDKIIAEYIWIGGTGIDMRSKSKTISKPVEHPSELPKWNYDGSSTGQAPGEDSEVILYPQAIFKDPFRGGNNILVICDTYTPAGE-PIPTNKRHRAAEIFSNSKVSAEVPWFGIEQEYTLLQQNVKWPLGWPVGAYPGPQGPYYCGAGADKSFGRDIADAHYKACLYAGINISGTNGEGMPGQWGYQVGPSVGIDAGDHIWGSRYLLERSLNQL-VLFSH*SKPIEGDWNGAGC 847
            P  +K+ A YIWI GTG  +R K++T+    +   ELP+WN+DGSST Q+ G +S++ L P A+F+DPFR   N LV+C+++    E P  TN RH    I     VS + PWFG+EQEYTL+  +   P GWP   +PGPQGPYYCG GAD+++GRDI +AHY+ACLYAG+ I+GTN E MP QW +Q+GP  GI  GDH+W +R++L R      V+ +   KPI G+WNGAGC
Sbjct:   21 PQGEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCVEELPEWNFDGSSTLQSEGSNSDMYLVPAAMFRDPFRKDPNKLVLCESFQVQFEGPAETNLRHTCKRIMD--MVSNQHPWFGMEQEYTLMGTDGH-PFGWPSNGFPGPQGPYYCGVGADRAYGRDIVEAHYRACLYAGVKIAGTNAEVMPAQWEFQIGPCEGISMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGC 253          
The following BLAST results are available for this feature:
BLAST of EY659824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
GLNA_PIG1.138e-6751.49Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV... [more]
GLNA_SQUAC1.486e-6751.91Glutamine synthetase, mitochondrial OS=Squalus aca... [more]
GLNA_YARLI1.941e-6751.91Glutamine synthetase OS=Yarrowia lipolytica GN=GLN... [more]
GLNA_SCHPO1.941e-6750.38Glutamine synthetase OS=Schizosaccharomyces pombe ... [more]
GLNA_CHICK3.311e-6751.49Glutamine synthetase OS=Gallus gallus GN=GLUL PE=2... [more]
GLNA_RAT7.377e-6748.43Glutamine synthetase OS=Rattus norvegicus GN=Glul ... [more]
GLNA_HUMAN9.634e-6750.21Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 ... [more]
GLNA_MOUSE1.258e-6648.03Glutamine synthetase OS=Mus musculus GN=Glul PE=1 ... [more]
GLNA_KLULA1.258e-6653.91Glutamine synthetase OS=Kluyveromyces lactis GN=GL... [more]
GLNA_MACFA3.661e-6650.42Glutamine synthetase OS=Macaca fascicularis GN=GLU... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-E05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659824 ID=EY659824; Name=EY659824; organism=Citrus sinensis; type=EST; length=902bp
TCATCATCAGACGCGTCCGGCAATGGCCTTTCAAAAAAGAGGGAAAGGAA
CAAATAGGAGTTCTGCCAAGTTTAGAGTGCTTGTTTTGACATCTAAAGAC
AGCACTGTCAATAGGCTAGAGGATCTACTCAATTTGGACATCACTCCATA
TACTGACAAAATCATTGCCGAATATATTTGGATTGGAGGTACTGGGATTG
ATATGCGTAGCAAGTCAAAGACCATTTCAAAGCCTGTTGAGCATCCATCT
GAGCTTCCCAAGTGGAATTATGATGGATCAAGTACTGGACAGGCACCTGG
TGAAGATAGTGAAGTAATTTTATACCCTCAAGCAATTTTTAAGGACCCCT
TCCGTGGAGGAAACAACATCTTGGTAATTTGTGATACCTACACACCAGCA
GGCGAGCCCATCCCTACAAACAAACGCCATAGGGCTGCTGAAATTTTCAG
TAACTCGAAAGTGTCTGCTGAAGTTCCATGGTTTGGGATAGAGCAAGAGT
ACACCTTACTTCAACAAAATGTGAAATGGCCTCTGGGTTGGCCTGTTGGA
GCCTATCCTGGTCCCCAGGGTCCTTATTACTGTGGAGCTGGGGCTGATAA
GTCGTTTGGCCGTGACATTGCAGATGCTCATTACAAGGCTTGCTTGTATG
CTGGCATTAACATTAGTGGCACCAACGGGGAGGGTATGCCTGGCCAGTGG
GGATATCAAGTTGGTCCCAGTGTAGGCATTGATGCTGGAGATCATATATG
GGGGTCGAGATACCTTCTTGAGAGATCACTGAACCAGCTGGTGTTGTTCT
CTCACTGATCCAAACCAATTGAGGGAGACTGGAATGGTGCTGGATGCCCC
CCCATTTCCGTNCNAGAGTCCCAGAAAGGAAGGAGGTTTGAAACTTATAG
AA
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