EY659803

Overview
NameEY659803
Unique NameEY659803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length953
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5074 contig Csv1_Contig5074:33..999. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PSEAE (NADH pyrophosphatase OS=Pseudomonas aeruginosa GN=nudC PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.293e-16
Identity = 52/137 (37.96%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  329 LCFVELRTVMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            + +  LR  M+  D+ DQ  M      G+A  +  W   +RFCG+CG +   ++  ++ QC    C    YPR+ P +I+LV     D VL +R  RFVP ++S +AGF+E GES+E  V+RE  EE G+EV  + Y
Sbjct:   78 MAWAPLRQFMLHGDF-DQFCML-----GYASQIGIWARHNRFCGNCGTRMQAQDHERVMQCPQ--CGLHQYPRLSPSMIVLVT--RGDEVLLARSPRFVPGVYSTLAGFVEAGESVEQCVVREVREEVGVEVANLEY 204          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PSEAB (NADH pyrophosphatase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=nudC PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.293e-16
Identity = 52/137 (37.96%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  329 LCFVELRTVMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            + +  LR  M+  D+ DQ  M      G+A  +  W   +RFCG+CG +   ++  ++ QC    C    YPR+ P +I+LV     D VL +R  RFVP ++S +AGF+E GES+E  V+RE  EE G+EV  + Y
Sbjct:   78 MAWAPLRQFMLHGDF-DQFCML-----GYASQIGIWARHNRFCGNCGTRMQAQDHERVMQCPQ--CGLHQYPRLSPSMIVLVT--RGDEVLLARSPRFVPGVYSTLAGFVEAGESVEQCVVREVREEVGVEVANLEY 204          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PSEA8 (NADH pyrophosphatase OS=Pseudomonas aeruginosa (strain LESB58) GN=nudC PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.293e-16
Identity = 52/137 (37.96%), Postives = 77/137 (56.20%), Query Frame = 2
Query:  329 LCFVELRTVMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            + +  LR  M+  D+ DQ  M      G+A  +  W   +RFCG+CG +   ++  ++ QC    C    YPR+ P +I+LV     D VL +R  RFVP ++S +AGF+E GES+E  V+RE  EE G+EV  + Y
Sbjct:   78 MAWAPLRQFMLHGDF-DQFCML-----GYASQIGIWARHNRFCGNCGTRMQAQDHERVMQCPQ--CGLHQYPRLSPSMIVLVT--RGDEVLLARSPRFVPGVYSTLAGFVEAGESVEQCVVREVREEVGVEVANLEY 204          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PSEA7 (NADH pyrophosphatase OS=Pseudomonas aeruginosa (strain PA7) GN=nudC PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.912e-16
Identity = 52/137 (37.96%), Postives = 75/137 (54.74%), Query Frame = 2
Query:  329 LCFVELRTVMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            + +  LR  M+  D+ DQ  M      G+A  +  W   +RFCG+CG +       ++ QC    C    YPR+ P +I+LV     D VL +R  RFVP ++S +AGF+E GES+E  V+RE  EE G+EV  + Y
Sbjct:   78 MAWTPLRQFMLHGDF-DQFCML-----GYASQIGIWARHNRFCGNCGTRMQALGHERVMQCPQ--CNLHQYPRLSPSMIVLVT--RGDEVLLARSPRFVPGVYSTLAGFVEAGESVEQCVVREVREEVGVEVANLEY 204          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PSESM (NADH pyrophosphatase OS=Pseudomonas syringae pv. tomato GN=nudC PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.415e-16
Identity = 44/110 (40.00%), Postives = 61/110 (55.45%), Query Frame = 2
Query:  410 GHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            G+A  +  W    RFCG CG  T+     +   C + +   R+YPR+ P +I+LV     D VL +R  RFV  M+S +AGF+EPGES ED V RE  EE  + +  + Y
Sbjct:   99 GYAAQVATWAREHRFCGACGRATVQIAGERAMYCEHDNL--RLYPRISPSMIVLVT--RGDEVLLARSPRFVSGMYSALAGFVEPGESAEDCVHREVMEEVQVRIKNLKY 204          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PSEU2 (NADH pyrophosphatase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=nudC PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.094e-15
Identity = 44/113 (38.94%), Postives = 62/113 (54.87%), Query Frame = 2
Query:  410 GHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            G+A  +  W    RFCG CG  T+     +   C + +   R+YPR+ P +I+LV     D +L +R  RFV  M+S +AGF+EPGES ED V RE  EE  + +  + Y  S
Sbjct:   99 GYAAQVSTWAREHRFCGACGRATVQIRGERAMFCEHDNL--RLYPRISPSMIVLVT--RGDEILLARSPRFVTGMYSALAGFVEPGESAEDCVHREVMEEVQVRIKNLRYRGS 207          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PSE14 (NADH pyrophosphatase OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.429e-15
Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 2
Query:  410 GHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            G+A  +  W    RFCG CG  T+     +   C + +   R+YPR+ P +I+LV     D +L +R  RFV  M+S +AGF+EPGES ED V RE  EE  + +  + Y
Sbjct:   99 GYAAQVSTWAREHRFCGACGRATVQIRGERAMFCEHDNL--RLYPRISPSMIVLVT--RGDEILLARSPRFVTGMYSALAGFVEPGESAEDCVHREVMEEVQVRIKNLKY 204          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PSEPF (NADH pyrophosphatase OS=Pseudomonas fluorescens (strain Pf0-1) GN=nudC PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.866e-15
Identity = 47/114 (41.23%), Postives = 64/114 (56.14%), Query Frame = 2
Query:  404 IAGHARALLEWHNVSRFCGHCGEKT--IPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            + G+A  +  W    RFCG+CG+    +P+E     Q     C  R YPR+ P +I+LV     D VL +R  RFV  ++S +AGF EPGES ED ++RE  EE  IEV  + Y
Sbjct:   95 VLGYAAQIGTWAREHRFCGNCGQAMTQVPRERAMYCQ----PCDLRSYPRISPSMIVLVT--RGDEVLLARSPRFVTGVYSTLAGFAEPGESAEDCLIREVREEVQIEVKNIQY 202          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PSEPK (NADH pyrophosphatase OS=Pseudomonas putida (strain KT2440) GN=nudC PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.430e-15
Identity = 51/150 (34.00%), Postives = 72/150 (48.00%), Query Frame = 2
Query:  314 FGSKQLCFVELR--TVMVATDWADQRAMA------DLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            F  + +  +ELR  T +    W   RA           + G+A  +  W    RFCG CG+        +   C    C  R YPR+ P +I+LV     D +L +R  RFV  ++S +AGF EPGES ED ++RE  EE  +EV  + Y
Sbjct:   57 FDGQPVFLLELRSATDVPGCSWRGLRAFMLEGDFDTYKVLGYAAQIGTWAREHRFCGSCGQPMTQIRWERAMYCQ--PCDLRSYPRISPSMIVLVT--RGDEILLARSPRFVTGVYSTLAGFAEPGESAEDCLVREVREEVAVEVKNIQY 202          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PSEPG (NADH pyrophosphatase OS=Pseudomonas putida (strain GB-1) GN=nudC PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.430e-15
Identity = 51/150 (34.00%), Postives = 72/150 (48.00%), Query Frame = 2
Query:  314 FGSKQLCFVELR--TVMVATDWADQRAMA------DLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            F  + +  +ELR  T +    W   RA           + G+A  +  W    RFCG CG+        +   C    C  R YPR+ P +I+LV     D +L +R  RFV  ++S +AGF EPGES ED ++RE  EE  +EV  + Y
Sbjct:   57 FDGQPVFLLELRSATDVPGCSWRGLRAFMLEGDFDTYKVLGYAAQIGTWAREHRFCGSCGQAMTQIRWERAMYCQ--PCDLRSYPRISPSMIVLVT--RGDEILLARSPRFVTGVYSTLAGFAEPGESAEDCLVREVREEVAVEVQNIQY 202          
The following BLAST results are available for this feature:
BLAST of EY659803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
NUDC_PSEAE1.293e-1637.96NADH pyrophosphatase OS=Pseudomonas aeruginosa GN=... [more]
NUDC_PSEAB1.293e-1637.96NADH pyrophosphatase OS=Pseudomonas aeruginosa (st... [more]
NUDC_PSEA81.293e-1637.96NADH pyrophosphatase OS=Pseudomonas aeruginosa (st... [more]
NUDC_PSEA74.912e-1637.96NADH pyrophosphatase OS=Pseudomonas aeruginosa (st... [more]
NUDC_PSESM6.415e-1640.00NADH pyrophosphatase OS=Pseudomonas syringae pv. t... [more]
NUDC_PSEU21.094e-1538.94NADH pyrophosphatase OS=Pseudomonas syringae pv. s... [more]
NUDC_PSE141.429e-1539.09NADH pyrophosphatase OS=Pseudomonas syringae pv. p... [more]
NUDC_PSEPF1.866e-1541.23NADH pyrophosphatase OS=Pseudomonas fluorescens (s... [more]
NUDC_PSEPK5.430e-1534.00NADH pyrophosphatase OS=Pseudomonas putida (strain... [more]
NUDC_PSEPG5.430e-1534.00NADH pyrophosphatase OS=Pseudomonas putida (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659803 ID=EY659803; Name=EY659803; organism=Citrus sinensis; type=EST; length=953bp
GGTACATCTGTTAGACGGTCCGGATTCCTTCCCAAACGGGCGTCCGCATA
TTACCTTTCATTACTAGGCTTCTCCTGATTTCAAGGTCTTGCCTTTCAGA
AAGGGCAGGCTCTTGCCTTATATAATAGGCCCTGGTGAGACGGCGCCGGT
TTGGCATCTGGGTTGGATCAGTTTGGGTGATTGCAAGATTTTCTTGGCGA
ATTCTGGGATTGAGTTGAAGGAAGAGGCTTTGGTTTATCTGGGTTCTCGG
TCTGCGGATGATGTGGTTTATTGGGCAATTGATGTGTCTGACGGGGATAG
CTTGGCTTCTGAATTCGGTAGTAAACAATTATGCTTTGTGGAGCTGAGGA
CGGTTATGGTGGCTACTGATTGGGCTGATCAGCGGGCTATGGCTGATTTG
GCTATTGCCGGTCATGCCAGGGCATTACTAGAGTGGCATAATGTATCACG
GTTTTGTGGACATTGTGGGGAAAAAACAATCCCTAAGGAAGCTGGGAAAC
TGAAGCAGTGCTCAAATGCATCGTGCAAAAAGAGGATTTACCCTCGTGTT
GATCCAGTGGTCATTATGTTGGTCATTGACAGAGAGAATGATCGTGTACT
TTTCAGCAGACTATCAAGATTTGTCCCACGAATGTGGAGCTGCATAGCTG
GTTTTATAGAGCCTGGAGAAAGCTTAGAAGACGCAGTGATGAGAGAAACC
TGGGAAGAGACTGGCATTGAAGTGGGGGAAGTTGTCTATCATACTTCCTC
ACATGGCCAGTCGGCCCAAATAGCATGCCATGCCAGTTAATGGTGGGGTT
TTACGCCTTGCAAAATCGTTTGAGATAATGTGGTTAAAGAAGAGTTAGAA
ATGCCTCGGGGCACTCCTGAGAAATGTAAAAAGGCATTGACGTTTGCTGA
TACCTTTAGCCCAAAACCACACCTGCAAATTAAACAATTGCAAGAGAATT
AAA
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