EY659803

Overview
NameEY659803
Unique NameEY659803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length953
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5074 contig Csv1_Contig5074:33..999. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_ECO27 (NADH pyrophosphatase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=nudC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.580e-14
Identity = 41/115 (35.65%), Postives = 70/115 (60.87%), Query Frame = 2
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +L ++ +R    + + +AGF+E GE+LE AV RE  EE+GI+V  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS 191          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_ECO24 (NADH pyrophosphatase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=nudC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.580e-14
Identity = 41/115 (35.65%), Postives = 70/115 (60.87%), Query Frame = 2
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +L ++ +R    + + +AGF+E GE+LE AV RE  EE+GI+V  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS 191          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_DEIRA (NADH pyrophosphatase OS=Deinococcus radiodurans GN=nudC PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.580e-14
Identity = 45/117 (38.46%), Postives = 67/117 (57.26%), Query Frame = 2
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVI--DRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG A  L+++    +FCG CG    P E  + ++C   SC  R+YPRV P +I+L+      +   L  R  R  P +++ +AGF+EP E+LE AV RE  EE G++V +V Y  S
Sbjct:   96 LAGLAVQLVDFQRSHQFCGACGTPMRPGEGDRARRCP--SCGLRVYPRVAPAIIVLISRGTGPDTEFLLLRGPRQAPDVFTTLAGFVEPSETLEAAVHREVGEEVGVKVRQVQYRFS 210          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_SALHS (NADH pyrophosphatase OS=Salmonella heidelberg (strain SL476) GN=nudC PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.064e-14
Identity = 43/115 (37.39%), Postives = 67/115 (58.26%), Query Frame = 2
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +L +R  R    + + +AGF+E GE+LE AV RE  EE+GI+V  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RREDSILLARHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS 191          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_SHIFL (NADH pyrophosphatase OS=Shigella flexneri GN=nudC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.695e-14
Identity = 41/115 (35.65%), Postives = 70/115 (60.87%), Query Frame = 2
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   ++CG+CG +  P +      CS+  C++R YP++ P +I+ +  R +D +L ++ +R    + + +AGF+E GE+LE AV RE  EE+GI+V  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHKYCGYCGHEMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRDDSLLLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS 191          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_CITK8 (NADH pyrophosphatase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=nudC PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 2.695e-14
Identity = 42/115 (36.52%), Postives = 68/115 (59.13%), Query Frame = 2
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +L ++ +R    + + +AGF+E GE+LE AV RE  EE+GI+V  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMYPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RRADSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS 191          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_SALTI (NADH pyrophosphatase OS=Salmonella typhi GN=nudC PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.520e-14
Identity = 43/115 (37.39%), Postives = 66/115 (57.39%), Query Frame = 2
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   +FCG+CG    P +      CS+  C+ R YP++ P +I+ +  R  D +L +R  R    + + +AGF+E GE+LE AV RE  EE+GI+V  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRDRYYPQIAPCIIVAI--RREDSILLARHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS 191          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_ERWCT (NADH pyrophosphatase OS=Erwinia carotovora subsp. atroseptica GN=nudC PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.597e-14
Identity = 43/133 (32.33%), Postives = 74/133 (55.64%), Query Frame = 2
Query:  365 TDWADQRAMAD-----LAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            TD A  R + D       +AG    L E++   RFCG+CG + +  +      C +  CK+R YP++ P +I+ +  R  + +L ++ +R    M++ +AGF+E GE+LE  V+RE  EE+ I++  + Y +S
Sbjct:   63 TDMASVRQLLDQDVGLFQLAGRGVQLAEFYRSHRFCGYCGHEMVRSKTELACLCHH--CKERYYPQIAPCIIVAI--RRGEEILLAQHNRHRGNMYTVLAGFVEVGETLEQTVVREVMEESQIQIKNLRYVSS 191          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_SALTY (NADH pyrophosphatase OS=Salmonella typhimurium GN=nudC PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.004e-14
Identity = 42/115 (36.52%), Postives = 67/115 (58.26%), Query Frame = 2
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +L ++  R    + + +AGF+E GE+LE AV RE  EE+GI+V  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RREDSILLAQHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS 191          
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_SALSV (NADH pyrophosphatase OS=Salmonella schwarzengrund (strain CVM19633) GN=nudC PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 6.004e-14
Identity = 42/115 (36.52%), Postives = 67/115 (58.26%), Query Frame = 2
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   +FCG+CG    P +      CS+  C++R YP++ P +I+ +  R  D +L ++  R    + + +AGF+E GE+LE AV RE  EE+GI+V  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHKFCGYCGHPMHPSKTEWAMLCSH--CRERYYPQIAPCIIVAI--RREDSILLAQHVRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTS 191          
The following BLAST results are available for this feature:
BLAST of EY659803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
NUDC_ECO271.580e-1435.65NADH pyrophosphatase OS=Escherichia coli O127:H6 (... [more]
NUDC_ECO241.580e-1435.65NADH pyrophosphatase OS=Escherichia coli O139:H28 ... [more]
NUDC_DEIRA1.580e-1438.46NADH pyrophosphatase OS=Deinococcus radiodurans GN... [more]
NUDC_SALHS2.064e-1437.39NADH pyrophosphatase OS=Salmonella heidelberg (str... [more]
NUDC_SHIFL2.695e-1435.65NADH pyrophosphatase OS=Shigella flexneri GN=nudC ... [more]
NUDC_CITK82.695e-1436.52NADH pyrophosphatase OS=Citrobacter koseri (strain... [more]
NUDC_SALTI3.520e-1437.39NADH pyrophosphatase OS=Salmonella typhi GN=nudC P... [more]
NUDC_ERWCT4.597e-1432.33NADH pyrophosphatase OS=Erwinia carotovora subsp. ... [more]
NUDC_SALTY6.004e-1436.52NADH pyrophosphatase OS=Salmonella typhimurium GN=... [more]
NUDC_SALSV6.004e-1436.52NADH pyrophosphatase OS=Salmonella schwarzengrund ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659803 ID=EY659803; Name=EY659803; organism=Citrus sinensis; type=EST; length=953bp
GGTACATCTGTTAGACGGTCCGGATTCCTTCCCAAACGGGCGTCCGCATA
TTACCTTTCATTACTAGGCTTCTCCTGATTTCAAGGTCTTGCCTTTCAGA
AAGGGCAGGCTCTTGCCTTATATAATAGGCCCTGGTGAGACGGCGCCGGT
TTGGCATCTGGGTTGGATCAGTTTGGGTGATTGCAAGATTTTCTTGGCGA
ATTCTGGGATTGAGTTGAAGGAAGAGGCTTTGGTTTATCTGGGTTCTCGG
TCTGCGGATGATGTGGTTTATTGGGCAATTGATGTGTCTGACGGGGATAG
CTTGGCTTCTGAATTCGGTAGTAAACAATTATGCTTTGTGGAGCTGAGGA
CGGTTATGGTGGCTACTGATTGGGCTGATCAGCGGGCTATGGCTGATTTG
GCTATTGCCGGTCATGCCAGGGCATTACTAGAGTGGCATAATGTATCACG
GTTTTGTGGACATTGTGGGGAAAAAACAATCCCTAAGGAAGCTGGGAAAC
TGAAGCAGTGCTCAAATGCATCGTGCAAAAAGAGGATTTACCCTCGTGTT
GATCCAGTGGTCATTATGTTGGTCATTGACAGAGAGAATGATCGTGTACT
TTTCAGCAGACTATCAAGATTTGTCCCACGAATGTGGAGCTGCATAGCTG
GTTTTATAGAGCCTGGAGAAAGCTTAGAAGACGCAGTGATGAGAGAAACC
TGGGAAGAGACTGGCATTGAAGTGGGGGAAGTTGTCTATCATACTTCCTC
ACATGGCCAGTCGGCCCAAATAGCATGCCATGCCAGTTAATGGTGGGGTT
TTACGCCTTGCAAAATCGTTTGAGATAATGTGGTTAAAGAAGAGTTAGAA
ATGCCTCGGGGCACTCCTGAGAAATGTAAAAAGGCATTGACGTTTGCTGA
TACCTTTAGCCCAAAACCACACCTGCAAATTAAACAATTGCAAGAGAATT
AAA
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