EY659803

Overview
NameEY659803
Unique NameEY659803
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length953
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5074 contig Csv1_Contig5074:33..999. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_MYCBT (NADH pyrophosphatase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=nudC PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.897e-13
Identity = 46/112 (41.07%), Postives = 61/112 (54.46%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            +   A ALL WH+ +RF    G  T P  AG  +   N       +PR+DP VI LV D   DR + +R + +  RM+S +AGF+E GES E  V RE  EE G+ V +V Y
Sbjct:  124 LVSSASALLNWHDNARFSALDGAPTKPARAGWSRV--NPITGHEEFPRIDPAVICLVHDGA-DRAVLARQAAWPERMFSLLAGFVEAGESFEVCVAREIREEIGLTVRDVRY 232

HSP 2 Score: 20.4014 bits (41), Expect = 6.897e-13
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 1 
Query:  766 PNSMPCQLMVGFYAL 810
            P   P  LMVGF+AL
Sbjct:  237 PWPFPRSLMVGFHAL 251
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_MYCBP (NADH pyrophosphatase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=nudC PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.897e-13
Identity = 46/112 (41.07%), Postives = 61/112 (54.46%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            +   A ALL WH+ +RF    G  T P  AG  +   N       +PR+DP VI LV D   DR + +R + +  RM+S +AGF+E GES E  V RE  EE G+ V +V Y
Sbjct:  124 LVSSASALLNWHDNARFSALDGAPTKPARAGWSRV--NPITGHEEFPRIDPAVICLVHDGA-DRAVLARQAAWPERMFSLLAGFVEAGESFEVCVAREIREEIGLTVRDVRY 232

HSP 2 Score: 20.4014 bits (41), Expect = 6.897e-13
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 1 
Query:  766 PNSMPCQLMVGFYAL 810
            P   P  LMVGF+AL
Sbjct:  237 PWPFPRSLMVGFHAL 251
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_MYCBO (NADH pyrophosphatase OS=Mycobacterium bovis GN=nudC PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.897e-13
Identity = 46/112 (41.07%), Postives = 61/112 (54.46%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            +   A ALL WH+ +RF    G  T P  AG  +   N       +PR+DP VI LV D   DR + +R + +  RM+S +AGF+E GES E  V RE  EE G+ V +V Y
Sbjct:  124 LVSSASALLNWHDNARFSALDGAPTKPARAGWSRV--NPITGHEEFPRIDPAVICLVHDGA-DRAVLARQAAWPERMFSLLAGFVEAGESFEVCVAREIREEIGLTVRDVRY 232

HSP 2 Score: 20.4014 bits (41), Expect = 6.897e-13
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 1 
Query:  766 PNSMPCQLMVGFYAL 810
            P   P  LMVGF+AL
Sbjct:  237 PWPFPRSLMVGFHAL 251
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_PASMU (NADH pyrophosphatase OS=Pasteurella multocida GN=nudC PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.670e-13
Identity = 46/149 (30.87%), Postives = 69/149 (46.31%), Query Frame = 2 
Query:  302 LASEFGSKQLCFVELRTVMVATDWADQRAMADLAIAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            L  E    Q  +  LR+++   +       A   +      L  +    RFCG CG  T   +     QC N SC  R YP + P +I+ V  R   ++L +   R    +++ +AGF+E GE+ E AV RE  EETGI++  + Y  S
Sbjct:   55 LVEEIADDQRTYFSLRSLLALPE-------AHFNLLNRGVELNHFFKTHRFCGKCGHPTDLVQQEWAIQCQNPSCSHRTYPVICPCIIVAV--RRGAQILLANHQRHKGGIYTTLAGFVEVGETFEQAVHREVLEETGIQIQNLRYFGS 194
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_MYCTU (NADH pyrophosphatase OS=Mycobacterium tuberculosis GN=nudC PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.931e-12
Identity = 46/112 (41.07%), Postives = 61/112 (54.46%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            +   A ALL WH+ +RF    G  T P  AG  +   N       +PR+DP VI LV D   DR + +R + +  RM+S +AGF+E GES E  V RE  EE G+ V +V Y
Sbjct:  124 LVSSASALLNWHDNARFSALDGAPTKPARAGWSRV--NPITGHEEFPRIDPAVICLVHDGA-DRAVLARQAAWPERMFSLLAGFVEAGESFEVCVAREIREEIGLTVRDVRY 232
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_MYCTA (NADH pyrophosphatase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=nudC PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.931e-12
Identity = 46/112 (41.07%), Postives = 61/112 (54.46%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVY 739
            +   A ALL WH+ +RF    G  T P  AG  +   N       +PR+DP VI LV D   DR + +R + +  RM+S +AGF+E GES E  V RE  EE G+ V +V Y
Sbjct:  124 LVSSASALLNWHDNARFSALDGAPTKPARAGWSRV--NPITGHEEFPRIDPAVICLVHDGA-DRAVLARQAAWPERMFSLLAGFVEAGESFEVCVAREIREEIGLTVRDVRY 232
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_YERPY (NADH pyrophosphatase OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=nudC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.295e-12
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   RFCG+CG +           C++  C++R YP++ P VI+ +  R  D +L ++  R    + + +AGF+E GE+LE AV RE  EE+ I +  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNH--CRERYYPQIAPCVIVAI--RRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTS 191
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_YERPS (NADH pyrophosphatase OS=Yersinia pseudotuberculosis GN=nudC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.295e-12
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   RFCG+CG +           C++  C++R YP++ P VI+ +  R  D +L ++  R    + + +AGF+E GE+LE AV RE  EE+ I +  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNH--CRERYYPQIAPCVIVAI--RRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTS 191
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_YERPP (NADH pyrophosphatase OS=Yersinia pestis (strain Pestoides F) GN=nudC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.295e-12
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   RFCG+CG +           C++  C++R YP++ P VI+ +  R  D +L ++  R    + + +AGF+E GE+LE AV RE  EE+ I +  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNH--CRERYYPQIAPCVIVAI--RRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTS 191
[Close]
BLAST of EY659803 vs. ExPASy Swiss-Prot
Match: NUDC_YERPN (NADH pyrophosphatase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=nudC PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.295e-12
Identity = 40/115 (34.78%), Postives = 64/115 (55.65%), Query Frame = 2 
Query:  404 IAGHARALLEWHNVSRFCGHCGEKTIPKEAGKLKQCSNASCKKRIYPRVDPVVIMLVIDRENDRVLFSRLSRFVPRMWSCIAGFIEPGESLEDAVMRETWEETGIEVGEVVYHTS 748
            +AG    L E++   RFCG+CG +           C++  C++R YP++ P VI+ +  R  D +L ++  R    + + +AGF+E GE+LE AV RE  EE+ I +  + Y TS
Sbjct:   81 LAGRGVQLAEFYRSHRFCGYCGHEMHASRTEWASLCNH--CRERYYPQIAPCVIVAI--RRGDEILLAQHVRHRGGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTS 191
The following BLAST results are available for this feature:
BLAST of EY659803 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
NUDC_MYCBT6.897e-1341.07NADH pyrophosphatase OS=Mycobacterium bovis (strai... [more]
NUDC_MYCBP6.897e-1341.07NADH pyrophosphatase OS=Mycobacterium bovis (strai... [more]
NUDC_MYCBO6.897e-1341.07NADH pyrophosphatase OS=Mycobacterium bovis GN=nud... [more]
NUDC_PASMU8.670e-1330.87NADH pyrophosphatase OS=Pasteurella multocida GN=n... [more]
NUDC_MYCTU1.931e-1241.07NADH pyrophosphatase OS=Mycobacterium tuberculosis... [more]
NUDC_MYCTA1.931e-1241.07NADH pyrophosphatase OS=Mycobacterium tuberculosis... [more]
NUDC_YERPY3.295e-1234.78NADH pyrophosphatase OS=Yersinia pseudotuberculosi... [more]
NUDC_YERPS3.295e-1234.78NADH pyrophosphatase OS=Yersinia pseudotuberculosi... [more]
NUDC_YERPP3.295e-1234.78NADH pyrophosphatase OS=Yersinia pestis (strain Pe... [more]
NUDC_YERPN3.295e-1234.78NADH pyrophosphatase OS=Yersinia pestis bv. Antiqu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659803 ID=EY659803; Name=EY659803; organism=Citrus sinensis; type=EST; length=953bp
GGTACATCTGTTAGACGGTCCGGATTCCTTCCCAAACGGGCGTCCGCATA
TTACCTTTCATTACTAGGCTTCTCCTGATTTCAAGGTCTTGCCTTTCAGA
AAGGGCAGGCTCTTGCCTTATATAATAGGCCCTGGTGAGACGGCGCCGGT
TTGGCATCTGGGTTGGATCAGTTTGGGTGATTGCAAGATTTTCTTGGCGA
ATTCTGGGATTGAGTTGAAGGAAGAGGCTTTGGTTTATCTGGGTTCTCGG
TCTGCGGATGATGTGGTTTATTGGGCAATTGATGTGTCTGACGGGGATAG
CTTGGCTTCTGAATTCGGTAGTAAACAATTATGCTTTGTGGAGCTGAGGA
CGGTTATGGTGGCTACTGATTGGGCTGATCAGCGGGCTATGGCTGATTTG
GCTATTGCCGGTCATGCCAGGGCATTACTAGAGTGGCATAATGTATCACG
GTTTTGTGGACATTGTGGGGAAAAAACAATCCCTAAGGAAGCTGGGAAAC
TGAAGCAGTGCTCAAATGCATCGTGCAAAAAGAGGATTTACCCTCGTGTT
GATCCAGTGGTCATTATGTTGGTCATTGACAGAGAGAATGATCGTGTACT
TTTCAGCAGACTATCAAGATTTGTCCCACGAATGTGGAGCTGCATAGCTG
GTTTTATAGAGCCTGGAGAAAGCTTAGAAGACGCAGTGATGAGAGAAACC
TGGGAAGAGACTGGCATTGAAGTGGGGGAAGTTGTCTATCATACTTCCTC
ACATGGCCAGTCGGCCCAAATAGCATGCCATGCCAGTTAATGGTGGGGTT
TTACGCCTTGCAAAATCGTTTGAGATAATGTGGTTAAAGAAGAGTTAGAA
ATGCCTCGGGGCACTCCTGAGAAATGTAAAAAGGCATTGACGTTTGCTGA
TACCTTTAGCCCAAAACCACACCTGCAAATTAAACAATTGCAAGAGAATT
AAA
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