EY659801

Overview
NameEY659801
Unique NameEY659801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA2_METCA (Glycogen synthase 2 OS=Methylococcus capsulatus GN=glgA2 PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.032e-15
Identity = 47/117 (40.17%), Postives = 67/117 (57.26%), Query Frame = 2
Query:  128 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKW 469
            N  LAH++ AG+D +++PSRFEPCGL QL AMRYGT+P+V   GGL DTV ++ F+   +     +       D   + + + RA+A Y        E+MKN M  D SW  P + +
Sbjct:  363 NEELAHLVYAGSDVMVVPSRFEPCGLTQLIAMRYGTIPVVREIGGLADTVIDKDFSHRPL--HERNGYVFRDYDERGLESALGRAIACYYQYPDHFRELMKNAMRYDYSWNHPGQDY 477          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_RHILO (Glycogen synthase OS=Rhizobium loti GN=glgA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.654e-15
Identity = 45/114 (39.47%), Postives = 64/114 (56.14%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEE 475
            L+H +  G D I+IPSRFEPCGL QL+ +RYG VP+VA TGGL DT+ +          +   +   P +  A+   +RR +  Y   A  E + + GM  D+SW   A+K+ E
Sbjct:  358 LSHTMQGGCDAIIIPSRFEPCGLTQLYGLRYGCVPVVARTGGLADTIIDANEAAMAAGVATGLQFA-PNNGGAMLHAIRRLVDAYADPAAFETIQRQGMKADVSWDKSAEKYLE 470          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_PARDP (Glycogen synthase OS=Paracoccus denitrificans (strain Pd 1222) GN=glgA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.654e-15
Identity = 46/114 (40.35%), Postives = 62/114 (54.39%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 475
            L+  +IAG D IL+PSRFEPCGL QL+ +R+GT+P+VA TGGL DTV            +   +   PVD   +S  + R  A +   A    MM N MA  + W   A+ + E
Sbjct:  348 LSRRMIAGGDAILVPSRFEPCGLTQLYGLRFGTLPLVALTGGLADTVINASVAGLAAGVATGVQ-FHPVDARTLSRALTRLCALWHQPAAWQRMMDNAMAHPVGWDASARAYAE 460          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_HAES1 (Glycogen synthase OS=Haemophilus somnus (strain 129Pt) GN=glgA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.654e-15
Identity = 54/159 (33.96%), Postives = 80/159 (50.31%), Query Frame = 2
Query:   50 SAKTFAQKGEQXEIL-----------------YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWE 472
            SA+   Q+G Q  IL                 YPE        +  L+H++IAG D IL+PSRFEPCGL QL+ ++YGT+P+V STGGL DTV +  +   + +        +  DV  +   +  A   +   +  E ++ N M QD SW+  AK ++
Sbjct:  313 SAERIVQQGGQLAILGSGSAHLEAGINWLAQEYPENIAVKIGYDEALSHLMIAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRSTGGLADTVIDS-SSENIKARHATGFVFNDADVGGLCYGIDSAFTLWRKPSQWESVIVNAMEQDFSWQTSAKGYQ 470          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_FINM2 (Glycogen synthase OS=Finegoldia magna (strain ATCC 29328) GN=glgA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.654e-15
Identity = 48/127 (37.80%), Postives = 69/127 (54.33%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 475
            +P+K +     N   +H I AGADF+++PS FEPCG+ QL AMRYGT+P+V  TGGL DTV + F  F           ++  D      T+RRA++ Y       + +N M     W+  AK++ E
Sbjct:  345 FPDKLKANIYYNNEESHKIYAGADFLMMPSIFEPCGISQLIAMRYGTIPVVRETGGLRDTV-QSFNEFSKEGNGFSFTNINAHDFL---YTLRRAISFYYNDDFNIIKENAMNSKNDWEKSAKEYIE 467          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_DEIRA (Glycogen synthase OS=Deinococcus radiodurans GN=glgA PE=3 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.654e-15
Identity = 54/120 (45.00%), Postives = 66/120 (55.00%), Query Frame = 2
Query:  119 SQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEE 475
            S +N PLAH I AGA    +PSRFEPCGL QL AMRYGT+PIV  TGGL DTV     GF+        +A  P  + A     R A A +   A  +      M+ D SW GPA+++ E
Sbjct:  331 SGMNEPLAHRIYAGAHAFAMPSRFEPCGLSQLIAMRYGTLPIVRETGGLADTVPPE-VGFRF------ADATAPAFLQA----CREAQAAFQDPAQWQTRATRAMSLDFSWDGPARQYLE 439          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA2_RHIME (Glycogen synthase 2 OS=Rhizobium meliloti GN=glgA2 PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.466e-15
Identity = 45/114 (39.47%), Postives = 65/114 (57.02%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEE 475
            LAH I AGAD +L+PSRFEPCGL QL+A+RYG VP+VA TGGL +T+ +          +   +   P+D   +   +RR    Y  + + E + + GM  D SW   A ++ +
Sbjct:  358 LAHRIHAGADAMLVPSRFEPCGLTQLYALRYGCVPVVARTGGLSETIIDANDAALHAHVATGIQFA-PIDEDGLRHALRRTFRLYRLRRVWEGLRRQGMKTDCSWHRSAARYAD 470          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_SALAR (Glycogen synthase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=glgA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 493
            +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +        G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  360 SHRIMGGADIILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_RHOCS (Glycogen synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=glgA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15
Identity = 45/128 (35.16%), Postives = 71/128 (55.47%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 475
            +P +   V   +  L+H I AGAD +L+PSRFEPCGL Q++A+RYG +P+V+  GGL DTV +  T   +   S      +PV +  +   + RA A +    L   + +N M +D+ W   A+ + +
Sbjct:  365 HPGRVGLVRAYDEALSHRIQAGADVLLVPSRFEPCGLTQMYALRYGALPLVSRVGGLADTVTD-VTESSLADGSATGFVFEPVGLMPLIHAMERAAALWRRPDLWRTVQRNAMGRDVGWAASARHYAD 491          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_PROMT (Glycogen synthase OS=Prochlorococcus marinus (strain NATL2A) GN=glgA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15
Identity = 61/165 (36.97%), Postives = 84/165 (50.91%), Query Frame = 2
Query:   80 QXEILYPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGS-FSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 565
            Q  I YP +       +  L+ +I  GAD  L+PSRFEPCG+ QL AMRYG +PIV   GGLVDTVE      + GS F  D    +P+D     T++ R+   Y  Q +  ++    M+   SW   AK++E  L+  +V G  EP  D  E+   +    A P
Sbjct:  321 QLAIEYPGRFSVFLTYDDALSRLIYGGADAFLMPSRFEPCGISQLLAMRYGAIPIVRKVGGLVDTVEPYNPMNETGSGFCFD--RYEPID---FYTSLVRSWEEYRHQKSWKQLQLRAMSNKYSWDRSAKEYE--LMYKDVCGIKEPSPDAAEVEKFSYGQEADP 478          
The following BLAST results are available for this feature:
BLAST of EY659801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 352
Match NameE-valueIdentityDescription
GLGA2_METCA2.032e-1540.17Glycogen synthase 2 OS=Methylococcus capsulatus GN... [more]
GLGA_RHILO2.654e-1539.47Glycogen synthase OS=Rhizobium loti GN=glgA PE=3 S... [more]
GLGA_PARDP2.654e-1540.35Glycogen synthase OS=Paracoccus denitrificans (str... [more]
GLGA_HAES12.654e-1533.96Glycogen synthase OS=Haemophilus somnus (strain 12... [more]
GLGA_FINM22.654e-1537.80Glycogen synthase OS=Finegoldia magna (strain ATCC... [more]
GLGA_DEIRA2.654e-1545.00Glycogen synthase OS=Deinococcus radiodurans GN=gl... [more]
GLGA2_RHIME3.466e-1539.47Glycogen synthase 2 OS=Rhizobium meliloti GN=glgA2... [more]
GLGA_SALAR4.526e-1537.90Glycogen synthase OS=Salmonella arizonae (strain A... [more]
GLGA_RHOCS4.526e-1535.16Glycogen synthase OS=Rhodospirillum centenum (stra... [more]
GLGA_PROMT4.526e-1536.97Glycogen synthase OS=Prochlorococcus marinus (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659801 ID=EY659801; Name=EY659801; organism=Citrus sinensis; type=EST; length=847bp
CACTGGTACCCTGCTATACCGGTCCGGAATTCCTTTCAAAACACGCGCGT
CCGCAAAAACCTTTGCCCAAAAAGGGGAACAGNTGGAGATACTGTACCCT
GAGAAAGCCAGAGGAGTATCGCAACTCAATATTCCTCTGGCGCATATGAT
AATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGTG
GTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGCT
TCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCCA
GATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTGG
CTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCAA
GCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCATGGAA
AGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTTGCTG
GTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAAGGAA
AATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTATTTTG
GACCGCAAACATGGTCCTGTAATTGCTCACAACCCAAGATATTACTTAGG
AAATACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTCACTAATGGT
TTGGNAGTGAGACATTAGTGTTACCTTGGATAATGAAATATTAAGCTCTG
TTTACAGTTTTGTAAAAGGGCTCTGAAGGCTGTCGCACTCTCCTGAGATG
AAAAAGTTCACTGGACCAGTTATAAAAAAAAAAAAAAAAAAAAAAAA
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