EY659801

Overview
NameEY659801
Unique NameEY659801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_MAGSA (Glycogen synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=glgA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15
Identity = 49/129 (37.98%), Postives = 68/129 (52.71%), Query Frame = 2 
Query:  134 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDT-VEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPG 514
            PLAH ++AG D +L+PSRFEPCGL Q +A RYGTVP+  +TGGL DT V+ G+     G    +    +  +V A    V RA+  Y  +     ++K   AQD  W   A  + +   +L   G   G
Sbjct:  364 PLAHRMMAGGDMLLMPSRFEPCGLTQFYAFRYGTVPVAHATGGLADTLVDTGYDTLMTG--KANGFVFEHSNVGAFQWAVERAVGLYAKKDQWTRIVKACNAQDFGWGRSAGLYRDLYKSLTGNGGGKG 490
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_HAEI8 (Glycogen synthase OS=Haemophilus influenzae (strain 86-028NP) GN=glgA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15
Identity = 48/142 (33.80%), Postives = 78/142 (54.93%), Query Frame = 2 
Query:   47 ASAKTFAQKGEQXEILYPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 469
            + A  F Q   +    YP+        +  L+H+++AG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +  T   + + +      +     A+   ++RA A +   +A A +  + M QD SW+  A+++
Sbjct:  329 SGAPHFEQGIRELAERYPQNIAVKIGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTVVDS-TSESIKARTATGFVFESATPEALRHCLQRAFALWQKPRAWAMVRTDAMEQDFSWRKAAEQY 469
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_BACCN (Glycogen synthase OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=glgA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 4.526e-15
Identity = 52/134 (38.81%), Postives = 71/134 (52.99%), Query Frame = 2 
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 475
            Y EK +     N  LAH + AG+D  L+PS FEPCGL QL A+ YG +PIV  TGGL DTV+      +   GF   +F+             +  TVRRAL  Y   A+  +++K  M +D SWK  A  +++
Sbjct:  346 YSEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALTYGVIPIVRETGGLNDTVKSYHVETKSGNGFTFTNFNAH----------DMLYTVRRALRYYEDPAVWNQLVKQAMTEDHSWKTSALAYKD 469
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_SALTY (Glycogen synthase OS=Salmonella typhimurium GN=glgA PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 493
            +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +        G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  360 SHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_SALTI (Glycogen synthase OS=Salmonella typhi GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 493
            +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +        G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  360 SHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_SALSV (Glycogen synthase OS=Salmonella schwarzengrund (strain CVM19633) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 493
            +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +        G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  360 SHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_SALPK (Glycogen synthase OS=Salmonella paratyphi A (strain AKU_12601) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 493
            +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +        G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  360 SHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_SALPC (Glycogen synthase OS=Salmonella paratyphi C (strain RKS4594) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 493
            +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +        G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  360 SHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_SALPB (Glycogen synthase OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 493
            +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +        G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  360 SHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_SALPA (Glycogen synthase OS=Salmonella paratyphi A GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 493
            +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +        G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  360 SHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
The following BLAST results are available for this feature:
BLAST of EY659801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 352
Match NameE-valueIdentityDescription
GLGA_MAGSA4.526e-1537.98Glycogen synthase OS=Magnetospirillum magneticum (... [more]
GLGA_HAEI84.526e-1533.80Glycogen synthase OS=Haemophilus influenzae (strai... [more]
GLGA_BACCN4.526e-1538.81Glycogen synthase OS=Bacillus cereus subsp. cytoto... [more]
GLGA_SALTY5.912e-1537.90Glycogen synthase OS=Salmonella typhimurium GN=glg... [more]
GLGA_SALTI5.912e-1537.90Glycogen synthase OS=Salmonella typhi GN=glgA PE=3... [more]
GLGA_SALSV5.912e-1537.90Glycogen synthase OS=Salmonella schwarzengrund (st... [more]
GLGA_SALPK5.912e-1537.90Glycogen synthase OS=Salmonella paratyphi A (strai... [more]
GLGA_SALPC5.912e-1537.90Glycogen synthase OS=Salmonella paratyphi C (strai... [more]
GLGA_SALPB5.912e-1537.90Glycogen synthase OS=Salmonella paratyphi B (strai... [more]
GLGA_SALPA5.912e-1537.90Glycogen synthase OS=Salmonella paratyphi A GN=glg... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659801 ID=EY659801; Name=EY659801; organism=Citrus sinensis; type=EST; length=847bp
CACTGGTACCCTGCTATACCGGTCCGGAATTCCTTTCAAAACACGCGCGT
CCGCAAAAACCTTTGCCCAAAAAGGGGAACAGNTGGAGATACTGTACCCT
GAGAAAGCCAGAGGAGTATCGCAACTCAATATTCCTCTGGCGCATATGAT
AATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGTG
GTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGCT
TCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCCA
GATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTGG
CTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCAA
GCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCATGGAA
AGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTTGCTG
GTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAAGGAA
AATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTATTTTG
GACCGCAAACATGGTCCTGTAATTGCTCACAACCCAAGATATTACTTAGG
AAATACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTCACTAATGGT
TTGGNAGTGAGACATTAGTGTTACCTTGGATAATGAAATATTAAGCTCTG
TTTACAGTTTTGTAAAAGGGCTCTGAAGGCTGTCGCACTCTCCTGAGATG
AAAAAGTTCACTGGACCAGTTATAAAAAAAAAAAAAAAAAAAAAAAA
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