EY659801

Overview
NameEY659801
Unique NameEY659801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_SALNS (Glycogen synthase OS=Salmonella newport (strain SL254) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 493
            +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +        G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  360 SHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_SALHS (Glycogen synthase OS=Salmonella heidelberg (strain SL476) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 493
            +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +        G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  360 SHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_SALEP (Glycogen synthase OS=Salmonella enteritidis PT4 (strain P125109) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 493
            +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +        G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  360 SHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_SALDC (Glycogen synthase OS=Salmonella dublin (strain CT_02021853) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 493
            +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +        G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  360 SHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_SALCH (Glycogen synthase OS=Salmonella choleraesuis GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 493
            +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +        G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  360 SHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_SALA4 (Glycogen synthase OS=Salmonella agona (strain SL483) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 47/124 (37.90%), Postives = 66/124 (53.23%), Query Frame = 2 
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 493
            +H I+ GAD IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +        G   G    D  A       ++   +RRA   +   +L   + +  MA D SW+  AK + E    L+
Sbjct:  360 SHRIMGGADVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSDSSLENLADGIASGFVFEDSNA------WSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWQVAAKSYRELYYRLK 477
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_PROMA (Glycogen synthase OS=Prochlorococcus marinus GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 57/150 (38.00%), Postives = 79/150 (52.67%), Query Frame = 2 
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 565
            L+ +I AG+D  L+PSRFEPCG+ QL AMRYG++PIV + GGLVDTV       +  TGF    F       +P+D    +  VR   A    ++  E+ K  M Q  SW+  A ++E   +  EV+G  EP  D  E+   +    A P
Sbjct:  340 LSRLIYAGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRNVGGLVDTVIPHDPINKSGTGFCFDRF-------EPIDF--YTALVRSWEAFRHRRSWKELQKRAMTQMYSWERSAMEYE--TMYKEVSGYKEPSPDAIEVEKFSVGQDADP 478
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_PROA2 (Glycogen synthase OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 49/128 (38.28%), Postives = 72/128 (56.25%), Query Frame = 2 
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNG-MAQDLSWKGPAKKWEE 475
            YPEK    S+ +  + H I+A +D +LIP+  E CG++QL A+ YG+VP+V + GG ++T+EE   G + GS  V  E      V ++  T   AL TY      E +  G M +DL+WK  A K+ E
Sbjct:  360 YPEKLAVYSEFSDAIFHQIMASSDLLLIPAEVESCGMMQLFAIAYGSVPVVYTAGGNIETIEE-IAGDKNGSAFVFHE----YSVESLLATFEDALHTYADGERWERIVTGNMVRDLTWKNSAAKYNE 482
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_NOVAD (Glycogen synthase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 45/114 (39.47%), Postives = 62/114 (54.39%), Query Frame = 2 
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEE 475
            L+H + AG D IL+PSRFEPCGL QL+ + YG VP+VA TGGL DTV +      M   +   +  + V+  +VS  + RA+  Y        M + GM  D SW    K + +
Sbjct:  363 LSHRMQAGGDAILVPSRFEPCGLTQLYGLAYGCVPVVARTGGLADTVIDANLAAVMAGVATGVQ-FEGVNYPSVSDAISRAVTLYRQPDVWRAMQRAGMKTDFSWSRSGKAYAD 475
[Close]
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_HAEIN (Glycogen synthase OS=Haemophilus influenzae GN=glgA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.912e-15
Identity = 45/126 (35.71%), Postives = 73/126 (57.94%), Query Frame = 2 
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 469
            YP+        +  L+H+++AG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +  T   + + +      +     A+   ++RA A +   +A A +  + M QD SW+  A+++
Sbjct:  345 YPQNIAVKIGYDEALSHLMVAGGDVILVPSRFEPCGLTQLYGLQYGTLPLVRKTGGLADTVVDS-TSESIKARTATGFVFESATPEALRHCLQRAFALWQKPRAWAMVRTDAMEQDFSWRKAAEQY 469
The following BLAST results are available for this feature:
BLAST of EY659801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 352
Match NameE-valueIdentityDescription
GLGA_SALNS5.912e-1537.90Glycogen synthase OS=Salmonella newport (strain SL... [more]
GLGA_SALHS5.912e-1537.90Glycogen synthase OS=Salmonella heidelberg (strain... [more]
GLGA_SALEP5.912e-1537.90Glycogen synthase OS=Salmonella enteritidis PT4 (s... [more]
GLGA_SALDC5.912e-1537.90Glycogen synthase OS=Salmonella dublin (strain CT_... [more]
GLGA_SALCH5.912e-1537.90Glycogen synthase OS=Salmonella choleraesuis GN=gl... [more]
GLGA_SALA45.912e-1537.90Glycogen synthase OS=Salmonella agona (strain SL48... [more]
GLGA_PROMA5.912e-1538.00Glycogen synthase OS=Prochlorococcus marinus GN=gl... [more]
GLGA_PROA25.912e-1538.28Glycogen synthase OS=Prosthecochloris aestuarii (s... [more]
GLGA_NOVAD5.912e-1539.47Glycogen synthase OS=Novosphingobium aromaticivora... [more]
GLGA_HAEIN5.912e-1535.71Glycogen synthase OS=Haemophilus influenzae GN=glg... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659801 ID=EY659801; Name=EY659801; organism=Citrus sinensis; type=EST; length=847bp
CACTGGTACCCTGCTATACCGGTCCGGAATTCCTTTCAAAACACGCGCGT
CCGCAAAAACCTTTGCCCAAAAAGGGGAACAGNTGGAGATACTGTACCCT
GAGAAAGCCAGAGGAGTATCGCAACTCAATATTCCTCTGGCGCATATGAT
AATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGTG
GTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGCT
TCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCCA
GATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTGG
CTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCAA
GCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCATGGAA
AGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTTGCTG
GTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAAGGAA
AATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTATTTTG
GACCGCAAACATGGTCCTGTAATTGCTCACAACCCAAGATATTACTTAGG
AAATACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTCACTAATGGT
TTGGNAGTGAGACATTAGTGTTACCTTGGATAATGAAATATTAAGCTCTG
TTTACAGTTTTGTAAAAGGGCTCTGAAGGCTGTCGCACTCTCCTGAGATG
AAAAAGTTCACTGGACCAGTTATAAAAAAAAAAAAAAAAAAAAAAAA
back to top