EY659801

Overview
NameEY659801
Unique NameEY659801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA1_ANAVT (Glycogen synthase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.244e-13
Identity = 41/116 (35.34%), Postives = 63/116 (54.31%), Query Frame = 2
Query:  128 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKW 469
            N  L+H+I AGAD I++PS +EPCGL Q+  ++YGTVPIV   GGLV+TV +      +     +       D  A+ + + RA+  +    +   ++   GM  D SW  P K++
Sbjct:  366 NEELSHLIYAGADMIVVPSNYEPCGLTQMIGLKYGTVPIVRGVGGLVNTVFDRDYDQNLPPEKRNGYVFYQSDNQALESAMNRAIDLWYQSPEKFQQLAIQGMKYDYSWNNPGKEY 481          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_VIBPA (Glycogen synthase OS=Vibrio parahaemolyticus GN=glgA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.237e-13
Identity = 50/139 (35.97%), Postives = 75/139 (53.96%), Query Frame = 2
Query:   77 EQXEILYPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVD-CEAVDPV----DVAAVSTTVRRALATYGTQALAEMMK---NGMAQDLSWKGPAKKW 469
            E+    + +K   V   +  LAH++ AG+DF L+PS FEPCGL Q+++M YGT+PIV   GGL D+V +         + VD C+A   V       A+  T+ RAL  Y  Q L E+ +   + M +D  W+  A+ +
Sbjct:  348 EEVAAQFSDKFVFVEAYDNELAHLVEAGSDFFLMPSEFEPCGLNQIYSMAYGTLPIVRGVGGLKDSVND---------YDVDPCDATGFVFYEPTSQALLLTMLRALLLY-AQNLTEVQRVQLHAMQKDFCWRKAAESY 476          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_PETMO (Glycogen synthase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=glgA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.237e-13
Identity = 49/136 (36.03%), Postives = 73/136 (53.68%), Query Frame = 2
Query:   92 LYPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA--LAEMMKNGMAQDLSWKGPAKKWEE 475
            LYP+K       ++ LA  I AG+D  L+PS++EPCGL Q+++MRYGTVP+V  TGGL DTV E        TGF    +            A +  T+ +A+  +  +      + +N M +D S++  AKK+ E
Sbjct:  346 LYPKKISINITFDVDLAQKIYAGSDIFLMPSKYEPCGLGQMYSMRYGTVPVVRYTGGLKDTVSEYNPKDKKGTGFGFHEYK----------EADLLYTLMKAIYFHQKRKDDWTNIFENCMKEDFSYEKTAKKYIE 471          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_EXIS2 (Glycogen synthase OS=Exiguobacterium sibiricum (strain DSM 17290 / JCM 13490 / 255-15) GN=glgA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.237e-13
Identity = 46/125 (36.80%), Postives = 68/125 (54.40%), Query Frame = 2
Query:   98 PEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSW 448
            P+K       ++ LA  I AG+D  L+PSRFEPCGL QL +M+YG++PIV  TGGL DTV+       EG  GF   +++   E +D          ++R + TY  +     +++  M +D SW
Sbjct:  351 PDKVASYIGFDVGLAQRIYAGSDAFLMPSRFEPCGLSQLISMKYGSLPIVRETGGLRDTVQPFNQFTLEG-NGFSFSNYNAQ-EFLD---------AIKRTIETYHDKPVFKHLIETAMQEDFSW 464          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_ENT38 (Glycogen synthase OS=Enterobacter sp. (strain 638) GN=glgA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.237e-13
Identity = 41/120 (34.17%), Postives = 67/120 (55.83%), Query Frame = 2
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQ-MGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLE 493
            +H ++ G+D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +  T  + +        A +  +  ++   +RRA   +   +L   + +  MA D SW   A+ + +    L+
Sbjct:  360 SHRLMGGSDVILVPSRFEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD--TSLENLADGIATGFAFEDSNAWSLLRAIRRAFVLWSRPSLWRFVQRQAMAMDFSWHVAAQSYRDLYQRLK 477          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTR (Glycogen synthase OS=Chlamydia trachomatis GN=glgA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.237e-13
Identity = 41/87 (47.13%), Postives = 47/87 (54.02%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 397
            LA  I A AD I IPS FEPCGL Q+  MRYGTVP+V +TGGL DTV  G  GF            +P D       +  A+ TY T
Sbjct:  365 LARQIFAAADMICIPSMFEPCGLTQMIGMRYGTVPLVRATGGLADTVANGINGFSF---------FNPHDFYEFRNMLSEAVTTYRT 442          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTA (Glycogen synthase OS=Chlamydia trachomatis (strain A/HAR-13 / ATCC VR-571B) GN=glgA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.237e-13
Identity = 41/87 (47.13%), Postives = 47/87 (54.02%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 397
            LA  I A AD I IPS FEPCGL Q+  MRYGTVP+V +TGGL DTV  G  GF            +P D       +  A+ TY T
Sbjct:  365 LARQIFAAADMICIPSMFEPCGLTQMIGMRYGTVPLVRATGGLADTVANGINGFSF---------FNPHDFYEFRNMLSEAVTTYRT 442          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA2_SYNJA (Glycogen synthase 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=glgA2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.237e-13
Identity = 48/122 (39.34%), Postives = 63/122 (51.64%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW---EETLLNL 490
            LA +I  GAD  L+PSRFEPCG+ Q+ AMRYG VPI   TGGLVDTV        +G+        D  +     T + RA   +        + K GMA D SW+  A ++    E ++NL
Sbjct:  351 LAQLIYGGADVFLMPSRFEPCGISQMIAMRYGCVPIARRTGGLVDTVSHHIPSKGIGT----GYCFDRYEALDFYTCLARAWEAFQHKDTWQALQKRGMATDFSWQRSALEYLRLYELIMNL 468          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_RHOFD (Glycogen synthase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=glgA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.533e-13
Identity = 43/111 (38.74%), Postives = 59/111 (53.15%), Query Frame = 2
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 469
            AH +IAGAD IL+PS FEPCGL QL+ +RYGT+P+V   GGL DTV +  T   +   S      D +  A + + VRRA   +        + + GM     W   A+ +
Sbjct:  373 AHAVIAGADVILVPSEFEPCGLTQLYGLRYGTLPLVRRVGGLADTVVD-CTLENLDEGSATGFVFDELSPAGLLSAVRRAFVLFRRPDEWLAVQQRGMGLRFDWLASAQHY 482          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTB (Glycogen synthase OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=glgA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.533e-13
Identity = 41/87 (47.13%), Postives = 47/87 (54.02%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 397
            LA  I A AD I IPS FEPCGL Q+  MRYGTVP+V +TGGL DTV  G  GF            +P D       +  A+ TY T
Sbjct:  365 LARQIFAAADMICIPSMFEPCGLTQMIGMRYGTVPLVRATGGLADTVANGINGFSF---------FNPHDFYEFRNMLLEAVTTYRT 442          
The following BLAST results are available for this feature:
BLAST of EY659801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 352
Match NameE-valueIdentityDescription
GLGA1_ANAVT3.244e-1335.34Glycogen synthase 1 OS=Anabaena variabilis (strain... [more]
GLGA_VIBPA4.237e-1335.97Glycogen synthase OS=Vibrio parahaemolyticus GN=gl... [more]
GLGA_PETMO4.237e-1336.03Glycogen synthase OS=Petrotoga mobilis (strain DSM... [more]
GLGA_EXIS24.237e-1336.80Glycogen synthase OS=Exiguobacterium sibiricum (st... [more]
GLGA_ENT384.237e-1334.17Glycogen synthase OS=Enterobacter sp. (strain 638)... [more]
GLGA_CHLTR4.237e-1347.13Glycogen synthase OS=Chlamydia trachomatis GN=glgA... [more]
GLGA_CHLTA4.237e-1347.13Glycogen synthase OS=Chlamydia trachomatis (strain... [more]
GLGA2_SYNJA4.237e-1339.34Glycogen synthase 2 OS=Synechococcus sp. (strain J... [more]
GLGA_RHOFD5.533e-1338.74Glycogen synthase OS=Rhodoferax ferrireducens (str... [more]
GLGA_CHLTB5.533e-1347.13Glycogen synthase OS=Chlamydia trachomatis (strain... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659801 ID=EY659801; Name=EY659801; organism=Citrus sinensis; type=EST; length=847bp
CACTGGTACCCTGCTATACCGGTCCGGAATTCCTTTCAAAACACGCGCGT
CCGCAAAAACCTTTGCCCAAAAAGGGGAACAGNTGGAGATACTGTACCCT
GAGAAAGCCAGAGGAGTATCGCAACTCAATATTCCTCTGGCGCATATGAT
AATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGTG
GTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGCT
TCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCCA
GATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTGG
CTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCAA
GCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCATGGAA
AGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTTGCTG
GTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAAGGAA
AATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTATTTTG
GACCGCAAACATGGTCCTGTAATTGCTCACAACCCAAGATATTACTTAGG
AAATACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTCACTAATGGT
TTGGNAGTGAGACATTAGTGTTACCTTGGATAATGAAATATTAAGCTCTG
TTTACAGTTTTGTAAAAGGGCTCTGAAGGCTGTCGCACTCTCCTGAGATG
AAAAAGTTCACTGGACCAGTTATAAAAAAAAAAAAAAAAAAAAAAAA
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