EY659801

Overview
NameEY659801
Unique NameEY659801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_CHLT2 (Glycogen synthase OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=glgA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.533e-13
Identity = 41/87 (47.13%), Postives = 47/87 (54.02%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT 397
            LA  I A AD I IPS FEPCGL Q+  MRYGTVP+V +TGGL DTV  G  GF            +P D       +  A+ TY T
Sbjct:  365 LARQIFAAADMICIPSMFEPCGLTQMIGMRYGTVPLVRATGGLADTVANGINGFSF---------FNPHDFYEFRNMLLEAVTTYRT 442          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_ACIAC (Glycogen synthase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.533e-13
Identity = 47/119 (39.50%), Postives = 62/119 (52.10%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE------GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGMAQDLSWKGPAKKW 469
            LAH I AG+D  L+PSRFEPCGL Q+++  YGT P+V  TGGL D+V +        TGF +   S           AA    V RAL  + T   A   + +NGM +D  W   A+ +
Sbjct:  368 LAHGIEAGSDSFLMPSRFEPCGLNQMYSQAYGTPPVVTPTGGLADSVTDADDPAGNGTGFVLRGSS----------QAAFDQAVGRALHLWKTAPDAWRRLQRNGMQRDFGWTASARAY 476          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA2_SYNY3 (Probable glycogen synthase 2 OS=Synechocystis sp. (strain PCC 6803) GN=glgA2 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.533e-13
Identity = 46/128 (35.94%), Postives = 62/128 (48.44%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA--EMMKNGMAQDLSWKGPAKKWEE 475
            LAH+I   AD I++PS +EPCGL Q+  +RYG VP+V   GGLV+TV               GF  +Q              D  A+ T + RA+A Y    +A   +   GMA D SW  P  ++ E
Sbjct:  370 LAHLIYGAADIIVVPSNYEPCGLTQMIGLRYGAVPVVRGVGGLVNTVFDRDYDQNHPPEKRNGFVFYQ-------------PDEYALETALSRAIALYKDDPVAFKTLALQGMAYDYSWNKPGLQYVE 484          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA1_SYNY3 (Glycogen synthase 1 OS=Synechocystis sp. (strain PCC 6803) GN=glgA1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.533e-13
Identity = 55/151 (36.42%), Postives = 77/151 (50.99%), Query Frame = 2
Query:  128 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDGEEIAPLAKENVA 559
            N  L+  + AGAD  L+PSRFEPCGL QL AMRYG +PIV  TGGLVDTV       E  TG+    +       +P+D     T + RA   +  +A   ++ +  M  D SW   A ++ +      V G       EE++P+ +E +A
Sbjct:  337 NDALSRRVYAGADVFLMPSRFEPCGLSQLMAMRYGCIPIVRRTGGLVDTVSFYDPINEAGTGYCFDRY-------EPLD---CFTAMVRAWEGFRFKADWQKLQQRAMRADFSWYRSAGEYIKVYKG--VVGKP-----EELSPMEEEKIA 470          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_STRMU (Glycogen synthase OS=Streptococcus mutans GN=glgA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13
Identity = 49/134 (36.57%), Postives = 66/134 (49.25%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWE 472
            YP+K       ++ LA  I A +D  L+PS FEPCGL Q+ AMRYGT+P+V   GGL DTV      E+  TGF    FS             ++ T+  AL  Y    +    + KN M  D SW   ++ +E
Sbjct:  346 YPDKMSANITFDLELAQQIYAASDIFLMPSAFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVIPYNEFEKTGTGFGFQDFS----------GYWLTKTLEAALDVYYNRKEDWKILQKNAMTTDFSWDTASQSYE 469          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_PHOPR (Glycogen synthase OS=Photobacterium profundum GN=glgA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13
Identity = 46/135 (34.07%), Postives = 72/135 (53.33%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY--GTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLE 493
            + +K   V   + PLAH + AG DF ++PS FEPCGL Q++++ YGT+PIV S GGL DTV +     Q+ +  +     D     A+   ++R+L  Y    Q    + +N MA   +W   A+++ +  L  E
Sbjct:  364 HSDKFAFVETYSNPLAHCVEAGVDFFMMPSEFEPCGLNQMYSLAYGTLPIVRSVGGLKDTVIDYDQTPQVATGFI----YDTPTPEALLIKLQRSLLLYCQRPQEFKRLQQNAMACKFNWDESAEQYLDMYLGGE 494          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_NOSP7 (Glycogen synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=glgA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13
Identity = 46/115 (40.00%), Postives = 66/115 (57.39%), Query Frame = 2
Query:  128 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKW 469
            N  L+  I AG D  L+PSRFEPCG+ Q+ ++RYG+VPIV  TGGLVDTV         G+     +  +P+D   + T + RA   +  +    E+ K GM++D SW   AK++
Sbjct:  337 NDALSRRIYAGTDAFLMPSRFEPCGISQMMSLRYGSVPIVRRTGGLVDTVSHHDPENAAGT-GYCFDRYEPLD---LFTCMIRAWEGFRFKPQWQELQKRGMSEDFSWYKSAKEY 447          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_EUBE2 (Glycogen synthase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=glgA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13
Identity = 48/119 (40.34%), Postives = 66/119 (55.46%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-----EG-FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEE 475
            ++H I A  D  L+PS FEPCGL QL ++RYGTVPIV  TGGL DTVE     EG  TGF   +++   E +  V+ A       + +     +   +++  GM  D SW   A+K+EE
Sbjct:  363 MSHKIYAACDAFLMPSLFEPCGLSQLMSLRYGTVPIVRETGGLKDTVEPYNEYEGKGTGFSFANYNAH-EMLGIVNYA-------KDVYYNHKREWNKIVDRGMKTDFSWNSSARKYEE 473          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_ERWT9 (Glycogen synthase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=glgA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13
Identity = 44/118 (37.29%), Postives = 63/118 (53.39%), Query Frame = 2
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKWEE 475
            +H I+ GAD IL+PSRFEPCGL QL+A++YGT+P+V  TGGL DTV     E    G   G    D  A       ++   +RR+   +   +L   + +  M  D SW+  A  + +
Sbjct:  360 SHRIMGGADVILVPSRFEPCGLTQLYALKYGTLPLVRRTGGLADTVNDCSLENLADGIASGFSFEDSNA------WSLLRAIRRSFVLWSRPSLWRYVQRQAMGMDFSWQVAAVAYRD 471          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_ALKMQ (Glycogen synthase OS=Alkaliphilus metalliredigens (strain QYMF) GN=glgA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13
Identity = 49/138 (35.51%), Postives = 71/138 (51.45%), Query Frame = 2
Query:   80 QXEILYPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKW 469
            Q  I YPE+       +  LA  I  G+DF L+PS FEPCGL QL A+RYGTVPIV  TGGL DT++       EG  GF   +++             +  T++ A+  Y   +   ++++N M   + W+  AK +
Sbjct:  341 QAAIKYPERISTNLFFDEVLAQQIYGGSDFFLMPSLFEPCGLGQLIALRYGTVPIVRETGGLKDTIQYYDEVSKEG-NGFTFTNYNAH----------DMFNTIKEAIRLYPDKRKFNKVVRNAMNTKVGWEESAKTY 467          
The following BLAST results are available for this feature:
BLAST of EY659801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 352
Match NameE-valueIdentityDescription
GLGA_CHLT25.533e-1347.13Glycogen synthase OS=Chlamydia trachomatis (strain... [more]
GLGA_ACIAC5.533e-1339.50Glycogen synthase OS=Acidovorax avenae subsp. citr... [more]
GLGA2_SYNY35.533e-1335.94Probable glycogen synthase 2 OS=Synechocystis sp. ... [more]
GLGA1_SYNY35.533e-1336.42Glycogen synthase 1 OS=Synechocystis sp. (strain P... [more]
GLGA_STRMU7.227e-1336.57Glycogen synthase OS=Streptococcus mutans GN=glgA ... [more]
GLGA_PHOPR7.227e-1334.07Glycogen synthase OS=Photobacterium profundum GN=g... [more]
GLGA_NOSP77.227e-1340.00Glycogen synthase OS=Nostoc punctiforme (strain AT... [more]
GLGA_EUBE27.227e-1340.34Glycogen synthase OS=Eubacterium eligens (strain A... [more]
GLGA_ERWT97.227e-1337.29Glycogen synthase OS=Erwinia tasmaniensis (strain ... [more]
GLGA_ALKMQ7.227e-1335.51Glycogen synthase OS=Alkaliphilus metalliredigens ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659801 ID=EY659801; Name=EY659801; organism=Citrus sinensis; type=EST; length=847bp
CACTGGTACCCTGCTATACCGGTCCGGAATTCCTTTCAAAACACGCGCGT
CCGCAAAAACCTTTGCCCAAAAAGGGGAACAGNTGGAGATACTGTACCCT
GAGAAAGCCAGAGGAGTATCGCAACTCAATATTCCTCTGGCGCATATGAT
AATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGTG
GTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGCT
TCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCCA
GATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTGG
CTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCAA
GCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCATGGAA
AGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTTGCTG
GTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAAGGAA
AATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTATTTTG
GACCGCAAACATGGTCCTGTAATTGCTCACAACCCAAGATATTACTTAGG
AAATACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTCACTAATGGT
TTGGNAGTGAGACATTAGTGTTACCTTGGATAATGAAATATTAAGCTCTG
TTTACAGTTTTGTAAAAGGGCTCTGAAGGCTGTCGCACTCTCCTGAGATG
AAAAAGTTCACTGGACCAGTTATAAAAAAAAAAAAAAAAAAAAAAAA
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