EY659801

Overview
NameEY659801
Unique NameEY659801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8139 contig Csv1_Contig8139:750..1598. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_ANAD2 (Glycogen synthase OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=glgA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.564e-18
Identity = 54/127 (42.52%), Postives = 77/127 (60.63%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 472
            +P++       +  LAH I AGAD  L+PSRFEPCGL Q++++RYGTVP+V + GGL DTVE+ F GF  G+     E        A+ T  RRAL  +   +A   +++ GMA+D SW+  A ++E
Sbjct:  346 HPDRVAARIGFDEGLAHRIEAGADLFLMPSRFEPCGLNQMYSLRYGTVPVVRAVGGLADTVED-FDGFARGTGFRFSEYTP----QALLTATRRALDVFRDRRAWRGLVERGMAEDNSWERSAARYE 467          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_RHORT (Glycogen synthase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=glgA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.349e-18
Identity = 56/129 (43.41%), Postives = 74/129 (57.36%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAGSEPGID 520
            LAH+I   ADF+L+PSRFEPCGL QL+A+RYGT+P+V  TGGL D+V     G        D    D     A+   + RA+  Y  +A L ++ + GM+QD SWK  AK++      L V GS  G D
Sbjct:  364 LAHLIEGAADFLLVPSRFEPCGLTQLYALRYGTIPVVRRTGGLADSVSHLDDGPNGTGIVFDHALPD-----ALEWAIGRAMTLYRDKATLNKVRQRGMSQDFSWKRSAKEY------LRVYGSMVGGD 481          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_ANASK (Glycogen synthase OS=Anaeromyxobacter sp. (strain K) GN=glgA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.349e-18
Identity = 60/160 (37.50%), Postives = 89/160 (55.62%), Query Frame = 2
Query:   11 LLYRSGIPFKTRASAKTFAQKGEQXEILYPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE-----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 472
            +L  SG P    A  +TFA+   +    +P++       +  LAH I AGAD  L+PSRFEPCGL Q++++RYGTVP+V + GGL DTVE+       TGF+   ++            A+ T  RRAL  +   +A   +++ GMA+D SW+  A ++E
Sbjct:  326 VLLGSGDP----AYQETFARAARE----HPDRVAARIGFDEGLAHRIEAGADLFLMPSRFEPCGLNQMYSLRYGTVPVVRAVGGLADTVEDFDGVARGTGFRFSEYTPQ----------ALLTATRRALDVFRDRRAWRGLVERGMAEDNSWERSAARYE 467          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_ACICJ (Glycogen synthase OS=Acidiphilium cryptum (strain JF-5) GN=glgA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.713e-18
Identity = 54/134 (40.30%), Postives = 70/134 (52.24%), Query Frame = 2
Query:   98 PEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG-TQALAEMMKNGMAQDLSWKGPAKKW 469
            P +   +      L+H+I  GAD IL+PSRFEPCGL QL A RYG +P+V+  GGLVDTV +           TG Q G          PV  A +S  +RR  A Y      + M +N MA D+SW  PA+ +
Sbjct:  346 PGRVAAIIGFEESLSHLIQGGADAILVPSRFEPCGLTQLAAQRYGAIPVVSLVGGLVDTVIDANPVAISAGVATGIQFG----------PVSEAGLSDGLRRTAALYADPDKWSRMQRNAMALDVSWTEPARNY 469          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_RHILW (Glycogen synthase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=glgA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.461e-18
Identity = 48/115 (41.74%), Postives = 69/115 (60.00%), Query Frame = 2
Query:  128 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 469
            N P++H++ AG D I+IPSRFEPCGL QL+ +RYG VPIVA TGGL DTV +          +   +   PV    +   +RRA+  Y  + L  ++ K GM  D+SW+  A+++
Sbjct:  355 NEPMSHLMQAGCDAIIIPSRFEPCGLTQLYGLRYGCVPIVARTGGLNDTVIDANHAALAAKVATGIQ-FSPVTETGMLQAIRRAMHFYADRKLWTQLQKQGMKSDVSWEKSAERY 468          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_RHIE6 (Glycogen synthase OS=Rhizobium etli (strain CIAT 652) GN=glgA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.461e-18
Identity = 48/115 (41.74%), Postives = 69/115 (60.00%), Query Frame = 2
Query:  128 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 469
            N P++H++ AG D I+IPSRFEPCGL QL+ +RYG VPIVA TGGL DTV +          +   +   PV    +   +RRA+  Y  + L  ++ K GM  D+SW+  A+++
Sbjct:  355 NEPMSHLMQAGCDAIIIPSRFEPCGLTQLYGLRYGCVPIVARTGGLNDTVIDANHAALAAKVATGIQ-FSPVTETGLLQAIRRAMHFYADRKLWTQLQKQGMKSDVSWEKSAERY 468          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_THISH (Glycogen synthase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.744e-18
Identity = 54/138 (39.13%), Postives = 74/138 (53.62%), Query Frame = 2
Query:   59 TFAQKGEQXEILYPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 469
            T  Q        YPE        + PLAH + AGAD  ++PSRFEPCGL Q++++RYGTVP+V +TGGL DTV +          +   +  D     A++  + RALA Y   A    +M+ GMAQD SW   A+ +
Sbjct:  338 TLEQTARSLAERYPEHMGLHIGYSEPLAHQLEAGADIFVMPSRFEPCGLNQMYSLRYGTVPVVRNTGGLADTVVDADPAHLAARDATGIQ-FDEATPQALADALARALALYHDPACWKRLMQAGMAQDFSWGRSAEAY 474          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_RHOPS (Glycogen synthase OS=Rhodopseudomonas palustris (strain BisB5) GN=glgA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.744e-18
Identity = 56/132 (42.42%), Postives = 71/132 (53.79%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG-----FTGFQMG-SFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 469
            YP +   V   +  LAH I AGAD +L+PSRFEPCGL QL A+RYG VP+VA  GGL DTV +       TG   G  FS       PV    ++  + +  A Y   A    +  NGM  D+SWK PA+ +
Sbjct:  348 YPGQVGAVIGYDEALAHQIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFS-------PVTADMLTAALTKTRALYADHATWRNLQINGMTTDVSWKNPAQHY 472          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA2_GEOSL (Glycogen synthase 2 OS=Geobacter sulfurreducens GN=glgA2 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.744e-18
Identity = 57/123 (46.34%), Postives = 70/123 (56.91%), Query Frame = 2
Query:  128 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWE 472
            N PLA  I AG+D  L+PSRFEPCGL QL AMRYGTVP+V  TGGL DTV        EG TGF    F+ D          A    + RALA Y   ++   +M+ GM +D+SW   A ++E
Sbjct:  361 NDPLAPKIYAGSDLFLMPSRFEPCGLSQLIAMRYGTVPVVRHTGGLRDTVVDVTRHPREG-TGFTFEDFTAD----------ACWEAIERALAGYRDRESWRRIMRRGMHRDVSWHNAAGRYE 472          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA1_RHIRD (Glycogen synthase 1 OS=Rhizobium radiobacter GN=glgA1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.744e-18
Identity = 49/112 (43.75%), Postives = 67/112 (59.82%), Query Frame = 2
Query:  128 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPA 460
            N PL+H++ AG D I+IPSRFEPCGL QL+A+RYG +P+VA TGGL DTV +      + S +       PV +  +   +RR +  Y    L  +M K GM  D+SW+  A
Sbjct:  355 NEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDA-NHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSA 465          
The following BLAST results are available for this feature:
BLAST of EY659801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 352
Match NameE-valueIdentityDescription
GLGA_ANAD22.564e-1842.52Glycogen synthase OS=Anaeromyxobacter dehalogenans... [more]
GLGA_RHORT3.349e-1843.41Glycogen synthase OS=Rhodospirillum rubrum (strain... [more]
GLGA_ANASK3.349e-1837.50Glycogen synthase OS=Anaeromyxobacter sp. (strain ... [more]
GLGA_ACICJ5.713e-1840.30Glycogen synthase OS=Acidiphilium cryptum (strain ... [more]
GLGA_RHILW7.461e-1841.74Glycogen synthase OS=Rhizobium leguminosarum bv. t... [more]
GLGA_RHIE67.461e-1841.74Glycogen synthase OS=Rhizobium etli (strain CIAT 6... [more]
GLGA_THISH9.744e-1839.13Glycogen synthase OS=Thioalkalivibrio sp. (strain ... [more]
GLGA_RHOPS9.744e-1842.42Glycogen synthase OS=Rhodopseudomonas palustris (s... [more]
GLGA2_GEOSL9.744e-1846.34Glycogen synthase 2 OS=Geobacter sulfurreducens GN... [more]
GLGA1_RHIRD9.744e-1843.75Glycogen synthase 1 OS=Rhizobium radiobacter GN=gl... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659801 ID=EY659801; Name=EY659801; organism=Citrus sinensis; type=EST; length=847bp
CACTGGTACCCTGCTATACCGGTCCGGAATTCCTTTCAAAACACGCGCGT
CCGCAAAAACCTTTGCCCAAAAAGGGGAACAGNTGGAGATACTGTACCCT
GAGAAAGCCAGAGGAGTATCGCAACTCAATATTCCTCTGGCGCATATGAT
AATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGTG
GTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGCT
TCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCCA
GATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTGG
CTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCAA
GCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCATGGAA
AGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTTGCTG
GTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAAGGAA
AATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTATTTTG
GACCGCAAACATGGTCCTGTAATTGCTCACAACCCAAGATATTACTTAGG
AAATACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTCACTAATGGT
TTGGNAGTGAGACATTAGTGTTACCTTGGATAATGAAATATTAAGCTCTG
TTTACAGTTTTGTAAAAGGGCTCTGAAGGCTGTCGCACTCTCCTGAGATG
AAAAAGTTCACTGGACCAGTTATAAAAAAAAAAAAAAAAAAAAAAAA
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