EY659801

Overview
NameEY659801
Unique NameEY659801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_PSEA7 (Glycogen synthase OS=Pseudomonas aeruginosa (strain PA7) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 41/105 (39.05%), Postives = 57/105 (54.29%), Query Frame = 2
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWK 451
            A  I AG+DF+L+PSR+EPCGL QL+A  +G++PI   TGGL DT+ +G TGF     +            +    V RA+  Y   AL   M+   MA  + W+
Sbjct:  393 ARRIYAGSDFLLMPSRYEPCGLSQLYAQCFGSLPIARCTGGLADTIVDGVTGFLFREETAQ----------SYLDAVLRAINVYHCPALLNAMRCKAMAAPMFWR 487          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_PROMP (Glycogen synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 56/169 (33.14%), Postives = 79/169 (46.75%), Query Frame = 2
Query:   80 QXEILYPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 565
            Q  + YP +       +  L+ +I  G+D  L+PSRFEPCG+ QL AMRYG++PIV   GGLVDTV          TGF    F       +P+D    +  VR   A     +   +    M+Q+ SW+  A ++E   +  +V G   P  D  EI   +    A P
Sbjct:  321 QLALDYPGRFSVFLTYDDSLSRLIYGGSDAFLMPSRFEPCGISQLLAMRYGSIPIVRRVGGLVDTVLPHDPENNSGTGFCFDRF-------EPIDF--YTALVRSWEAFRHKDSWKSLQLRAMSQEFSWQRSALEYES--MYKDVCGIKAPSPDIAEIEKFSYGQSADP 478          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_HYDS0 (Glycogen synthase OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 2
Query:  122 QLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE------MMKNGMAQDLSWKGPAKKW 469
            + N  L+  + AGAD  L+PS +EPCG+ Q+ AMRYG +PIV  TGGL DTV       E  TGF    ++                T+ RA+  Y  + + E      ++ N MAQD SW+   +++
Sbjct:  352 EYNDILSRKLYAGADMFLMPSEYEPCGIGQMIAMRYGAIPIVHKTGGLADTVVDYNEDNEHGTGFSFEDYT----------YKDFLYTMARAMIVYQKKYIPEDNEWYNIVSNAMAQDFSWRRSVQEY 469          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_CHLL2 (Glycogen synthase OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=glgA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.103e-12
Identity = 41/132 (31.06%), Postives = 70/132 (53.03%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEE 475
            YPE+    +     L H+ IAG D +L+P R E CG++QL AM YGT+P+  + GG+V+T+    ++  +GF    ++ D          A +  V+ AL  Y   +   +++   M +D SWK  A ++++
Sbjct:  360 YPEQVSVRTDYADTLLHLAIAGFDMLLMPGRIESCGMLQLFAMSYGTIPVAYAGGGIVETIDAVTDKSGSGFLFYDYTAD----------AFAGKVQEALDLYHDEERWLQLVLEAMGKDFSWKNSAGEYDQ 481          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_VIBFM (Glycogen synthase OS=Vibrio fischeri (strain MJ11) GN=glgA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 47/122 (38.52%), Postives = 68/122 (55.74%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK---NGMAQDLSWKGPAKKWEE 475
            LAH + AG+DF ++PS FEPCGL Q+++M YGT+PIV   GGL D+V       E  TGF         +  +P+++  V   + R+L  Y +Q L E+ +   + M QD  W   A K+ E
Sbjct:  369 LAHWVEAGSDFFIMPSEFEPCGLNQIYSMAYGTLPIVREVGGLKDSVNNYDDDIENATGFSF-------KNPEPMELLLV---LMRSLLLY-SQNLNEVKRVQLHAMKQDFCWNKAALKYIE 479          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_STRZT (Glycogen synthase OS=Streptococcus pneumoniae (strain Taiwan19F-14) GN=glgA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 48/134 (35.82%), Postives = 63/134 (47.01%), Query Frame = 2
Query:   92 LYPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGMAQDLSWKGPAKKW 469
            +YP+K       ++ LA  I A  D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTV      E   TGF          + D +    ++ T + AL  Y         + K  M  D SW    K +
Sbjct:  345 IYPDKLSTNITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVRAFNPIEGSGTGF----------SFDNLSPYWLNWTFQTALDLYRNHPDIWRNLQKQAMESDFSWDTACKSY 468          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_STRZP (Glycogen synthase OS=Streptococcus pneumoniae (strain P1031) GN=glgA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 48/134 (35.82%), Postives = 63/134 (47.01%), Query Frame = 2
Query:   92 LYPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGMAQDLSWKGPAKKW 469
            +YP+K       ++ LA  I A  D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTV      E   TGF          + D +    ++ T + AL  Y         + K  M  D SW    K +
Sbjct:  345 IYPDKLSTNITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVRAFNPIEGSGTGF----------SFDNLSPYWLNWTFQTALDLYRNHPDIWRNLQKQAMESDFSWDTACKSY 468          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_STRS7 (Glycogen synthase OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=glgA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 39/80 (48.75%), Postives = 45/80 (56.25%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFS 316
            YPEK       ++PLA  I    D  L+PS FEPCGL Q+ AMRYG +PIV   GGL DTV      E+  TGF    FS
Sbjct:  346 YPEKLSANITFDLPLAQQIYGACDLFLMPSAFEPCGLSQMMAMRYGAIPIVHEIGGLKDTVASYNAYEKTGTGFGFDQFS 425          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_STRR6 (Glycogen synthase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=glgA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 48/134 (35.82%), Postives = 63/134 (47.01%), Query Frame = 2
Query:   92 LYPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGMAQDLSWKGPAKKW 469
            +YP+K       ++ LA  I A  D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTV      E   TGF          + D +    ++ T + AL  Y         + K  M  D SW    K +
Sbjct:  345 IYPDKLSTNITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVRAFNPIEGSGTGF----------SFDNLSPYWLNWTFQTALDLYRNHPDIWRNLQKQAMESDFSWDTACKSY 468          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_STRPS (Glycogen synthase OS=Streptococcus pneumoniae (strain CGSP14) GN=glgA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.746e-12
Identity = 48/134 (35.82%), Postives = 63/134 (47.01%), Query Frame = 2
Query:   92 LYPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGMAQDLSWKGPAKKW 469
            +YP+K       ++ LA  I A  D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTV      E   TGF          + D +    ++ T + AL  Y         + K  M  D SW    K +
Sbjct:  345 IYPDKLSTNITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVRAFNPIEGSGTGF----------SFDNLSPYWLNWTFQTALDLYRNHPDIWRNLQKQAMESDFSWDTACKSY 468          
The following BLAST results are available for this feature:
BLAST of EY659801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 352
Match NameE-valueIdentityDescription
GLGA_PSEA72.103e-1239.05Glycogen synthase OS=Pseudomonas aeruginosa (strai... [more]
GLGA_PROMP2.103e-1233.14Glycogen synthase OS=Prochlorococcus marinus subsp... [more]
GLGA_HYDS02.103e-1235.16Glycogen synthase OS=Hydrogenobaculum sp. (strain ... [more]
GLGA_CHLL22.103e-1231.06Glycogen synthase OS=Chlorobium limicola (strain D... [more]
GLGA_VIBFM2.746e-1238.52Glycogen synthase OS=Vibrio fischeri (strain MJ11)... [more]
GLGA_STRZT2.746e-1235.82Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA_STRZP2.746e-1235.82Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA_STRS72.746e-1248.75Glycogen synthase OS=Streptococcus equi subsp. zoo... [more]
GLGA_STRR62.746e-1235.82Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA_STRPS2.746e-1235.82Glycogen synthase OS=Streptococcus pneumoniae (str... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659801 ID=EY659801; Name=EY659801; organism=Citrus sinensis; type=EST; length=847bp
CACTGGTACCCTGCTATACCGGTCCGGAATTCCTTTCAAAACACGCGCGT
CCGCAAAAACCTTTGCCCAAAAAGGGGAACAGNTGGAGATACTGTACCCT
GAGAAAGCCAGAGGAGTATCGCAACTCAATATTCCTCTGGCGCATATGAT
AATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGTG
GTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGCT
TCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCCA
GATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTGG
CTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCAA
GCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCATGGAA
AGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTTGCTG
GTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAAGGAA
AATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTATTTTG
GACCGCAAACATGGTCCTGTAATTGCTCACAACCCAAGATATTACTTAGG
AAATACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTCACTAATGGT
TTGGNAGTGAGACATTAGTGTTACCTTGGATAATGAAATATTAAGCTCTG
TTTACAGTTTTGTAAAAGGGCTCTGAAGGCTGTCGCACTCTCCTGAGATG
AAAAAGTTCACTGGACCAGTTATAAAAAAAAAAAAAAAAAAAAAAAA
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