EY659801

Overview
NameEY659801
Unique NameEY659801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_LACPL (Glycogen synthase OS=Lactobacillus plantarum GN=glgA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 47/136 (34.56%), Postives = 65/136 (47.79%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV--EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALA--EMMKNGMAQDLSWKGPAKKWEETLLNL 490
            YP+K     Q +  LA  I A +D  L+PS FEPCGL Q+ AM YGT+PIV + GGL DTV     +TG   G       + D    A +   +  A+  Y    L   ++    M  D  W+  A+++  T   L
Sbjct:  348 YPQKVVAAIQFDTQLAQQIYAASDIFLMPSAFEPCGLSQMMAMHYGTLPIVHAVGGLRDTVIPYNRYTGQGTGF------SFDDYQPAVLRKIMILAVTLYRQHPLVWRQLQHQAMTCDFGWEHSAQQYRATYQKL 477          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_BACHD (Glycogen synthase OS=Bacillus halodurans GN=glgA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 49/131 (37.40%), Postives = 70/131 (53.44%), Query Frame = 2
Query:  134 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE-------EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNLEVAG 502
            PLA  + AGAD  ++PSRFEPCGL Q+ ++RY TVPIV  TGGL DT++       EG  GF    ++                T++RAL  Y T+   E ++ N  + ++ W   AK++  T L  E+ G
Sbjct:  353 PLARKLYAGADLFIMPSRFEPCGLSQMISLRYETVPIVRETGGLYDTIQSYNEEIGEG-NGFSFTHYNAH----------DFLYTIKRALRFYRTEKEWENLLLNIYSSEVGWDVSAKQY--TALYEEILG 470          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_STRPJ (Glycogen synthase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=glgA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12
Identity = 48/134 (35.82%), Postives = 62/134 (46.27%), Query Frame = 2
Query:   92 LYPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT--QALAEMMKNGMAQDLSWKGPAKKW 469
            +YP K       ++ LA  I A  D  L+PSRFEPCGL Q+ AMRYGT+P+V   GGL DTV      E   TGF          + D +    ++ T + AL  Y         + K  M  D SW    K +
Sbjct:  345 IYPGKLSANITFDVKLAQEIYAACDLFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVRAFNPIEGSGTGF----------SFDNLSPYWLNWTFQTALDLYRNHPDIWRNLQKQAMESDFSWDTACKSY 468          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_PSEAE (Glycogen synthase OS=Pseudomonas aeruginosa GN=glgA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12
Identity = 43/129 (33.33%), Postives = 64/129 (49.61%), Query Frame = 2
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMK-NGMAQDLSWKGPAKKWEETLLNLEVAGSEPGIDG 523
            A  I AG+DF+L+PSR+EPCGL QL+A  +G++PI   TGGL DT+ +G TGF     +            +    V RA+  Y   +L   M+   MA  + W    + +      L +  + P + G
Sbjct:  393 ARRIYAGSDFLLMPSRYEPCGLSQLYAQCFGSLPIARCTGGLADTIVDGVTGFLFREETAQ----------SYLDAVMRAINVYHCPSLLNAMRCKAMAAPMFWSDSVEPYNRLYRRL-LRNTAPALRG 510          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_DESVM (Glycogen synthase OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=glgA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12
Identity = 44/116 (37.93%), Postives = 61/116 (52.59%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV----EEGFTGFQMGSFSVDCEAVDP-VDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKW 469
            LAH I AG+D  L+PSR+EPCGL Q++A+RYGT P+  + GGL DT+        TGF  G         DP + + A+   V      + T+    MM   M QD SW+   + +
Sbjct:  370 LAHRIQAGSDIFLMPSRYEPCGLTQMYALRYGTPPVATAVGGLRDTIVPWPSPEATGFTFG-------RSDPQLFLEAILDAVH--YWEHDTEGWRAMMTRAMHQDFSWERAGRSY 476          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_CHLTE (Glycogen synthase OS=Chlorobium tepidum GN=glgA PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.684e-12
Identity = 42/121 (34.71%), Postives = 66/121 (54.55%), Query Frame = 2
Query:  143 HMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEE----GFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGT-QALAEMMKNGMAQDLSWKGPAKKWEETLLNL 490
            H +IAG D +L+ SR E CG++Q+ AM YGTVP+  + GG+VDT+EE      TGF    ++ +          A++  ++ ALA +   +  + +M   M +D SW   A ++ E   NL
Sbjct:  376 HQMIAGLDILLMTSRIEACGMMQMFAMNYGTVPVAYAGGGIVDTIEEVSGDKGTGFIFTDYTPE----------ALTAKLQEALALFANRERWSALMLECMGRDFSWSTSAGQYAELYRNL 486          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_LEPBP (Glycogen synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=glgA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.118e-12
Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = 2
Query:  128 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF-TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSW 448
            N  LAH I A +DF L+PS FEPCGL Q+++  YGT+PIV+  GGL DTV+E     F+ G         +P D +++   + RA   + +     ++KN M  D +W
Sbjct:  356 NESLAHQIEAASDFFLMPSLFEPCGLNQMYSHVYGTIPIVSRVGGLRDTVDESIDIQFKTGI------VFEPNDKSSLGYALERANDLFVSPERDHVVKNMMNLDWTW 457          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_LEPBA (Glycogen synthase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=glgA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.118e-12
Identity = 42/108 (38.89%), Postives = 61/108 (56.48%), Query Frame = 2
Query:  128 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGF-TGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSW 448
            N  LAH I A +DF L+PS FEPCGL Q+++  YGT+PIV+  GGL DTV+E     F+ G         +P D +++   + RA   + +     ++KN M  D +W
Sbjct:  356 NESLAHQIEAASDFFLMPSLFEPCGLNQMYSHVYGTIPIVSRVGGLRDTVDESIDIQFKTGI------VFEPNDKSSLGYALERANDLFVSPERDHVVKNMMNLDWTW 457          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_CLOD6 (Glycogen synthase OS=Clostridium difficile (strain 630) GN=glgA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.118e-12
Identity = 47/131 (35.88%), Postives = 69/131 (52.67%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATY-GTQALAEMMKNGMAQDLSWKGPAKKWEET 478
            + +K       N  LA  I A +D  L+PS FEPCG+ Q+ AMRYG++PIV  TGGL DTV     FTG   G    +  A +      +   ++ A+  +   +   ++++N M  D SWK  AK++ ET
Sbjct:  350 FSDKVSARITFNASLAQQIYAASDMFLMPSLFEPCGIGQMLAMRYGSLPIVRETGGLRDTVTPYNKFTGEGNGFSFKNYNAHE------MFFCLKNAIKVFKDKEKWIKLVENAMKTDNSWKKSAKEYIET 474          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_CHLPN (Glycogen synthase OS=Chlamydia pneumoniae GN=glgA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.118e-12
Identity = 37/63 (58.73%), Postives = 40/63 (63.49%), Query Frame = 2
Query:  110 RGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGF 298
            R +   N PLA +  A AD I IPS  E CGL QL AMRYGTVP+V  TGGL DTV  G  GF
Sbjct:  355 RLILDFNDPLARLTYAAADMICIPSHREACGLTQLIAMRYGTVPLVRKTGGLADTVIPGVNGF 417          
The following BLAST results are available for this feature:
BLAST of EY659801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 352
Match NameE-valueIdentityDescription
GLGA_LACPL3.587e-1234.56Glycogen synthase OS=Lactobacillus plantarum GN=gl... [more]
GLGA_BACHD3.587e-1237.40Glycogen synthase OS=Bacillus halodurans GN=glgA P... [more]
GLGA_STRPJ4.684e-1235.82Glycogen synthase OS=Streptococcus pneumoniae (str... [more]
GLGA_PSEAE4.684e-1233.33Glycogen synthase OS=Pseudomonas aeruginosa GN=glg... [more]
GLGA_DESVM4.684e-1237.93Glycogen synthase OS=Desulfovibrio vulgaris (strai... [more]
GLGA_CHLTE4.684e-1234.71Glycogen synthase OS=Chlorobium tepidum GN=glgA PE... [more]
GLGA_LEPBP6.118e-1238.89Glycogen synthase OS=Leptospira biflexa serovar Pa... [more]
GLGA_LEPBA6.118e-1238.89Glycogen synthase OS=Leptospira biflexa serovar Pa... [more]
GLGA_CLOD66.118e-1235.88Glycogen synthase OS=Clostridium difficile (strain... [more]
GLGA_CHLPN6.118e-1258.73Glycogen synthase OS=Chlamydia pneumoniae GN=glgA ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659801 ID=EY659801; Name=EY659801; organism=Citrus sinensis; type=EST; length=847bp
CACTGGTACCCTGCTATACCGGTCCGGAATTCCTTTCAAAACACGCGCGT
CCGCAAAAACCTTTGCCCAAAAAGGGGAACAGNTGGAGATACTGTACCCT
GAGAAAGCCAGAGGAGTATCGCAACTCAATATTCCTCTGGCGCATATGAT
AATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGTG
GTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGCT
TCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCCA
GATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTGG
CTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCAA
GCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCATGGAA
AGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTTGCTG
GTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAAGGAA
AATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTATTTTG
GACCGCAAACATGGTCCTGTAATTGCTCACAACCCAAGATATTACTTAGG
AAATACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTCACTAATGGT
TTGGNAGTGAGACATTAGTGTTACCTTGGATAATGAAATATTAAGCTCTG
TTTACAGTTTTGTAAAAGGGCTCTGAAGGCTGTCGCACTCTCCTGAGATG
AAAAAGTTCACTGGACCAGTTATAAAAAAAAAAAAAAAAAAAAAAAA
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