EY659801

Overview
NameEY659801
Unique NameEY659801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8139 contig Csv1_Contig8139:750..1598. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_THESQ (Glycogen synthase OS=Thermotoga sp. (strain RQ2) GN=glgA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.400e-16
Identity = 51/127 (40.16%), Postives = 69/127 (54.33%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA--LAEMMKNGMAQDLSWKGPAKKW 469
            YP+K     + ++ LA  I AGAD  L+PSR+EPCGL Q+ +MRYGT+P+V  TGGL DTV+E    +   S           D A +   V +AL  Y  +      +M N M  DLSW   AK++
Sbjct:  351 YPDKVSANIKFDVELAQKIYAGADIFLMPSRYEPCGLGQMFSMRYGTIPVVRYTGGLADTVKE----YDPQSMEGTGFGFKKYDSAHLLKAVSKALHFYYREKDHWRRIMTNAMNTDLSWDRSAKEY 473          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_THEP1 (Glycogen synthase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glgA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.400e-16
Identity = 51/127 (40.16%), Postives = 69/127 (54.33%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA--LAEMMKNGMAQDLSWKGPAKKW 469
            YP+K     + ++ LA  I AGAD  L+PSR+EPCGL Q+ +MRYGT+P+V  TGGL DTV+E    +   S           D A +   V +AL  Y  +      +M N M  DLSW   AK++
Sbjct:  351 YPDKVSANIKFDVELAQKIYAGADIFLMPSRYEPCGLGQMFSMRYGTIPVVRYTGGLADTVKE----YDPQSMEGTGFGFKKYDSAHLLKAVSKALHFYYREKDHWRRIMTNAMNTDLSWDRSAKEY 473          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_THEMA (Glycogen synthase OS=Thermotoga maritima GN=glgA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.400e-16
Identity = 51/127 (40.16%), Postives = 69/127 (54.33%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA--LAEMMKNGMAQDLSWKGPAKKW 469
            YP+K     + ++ LA  I AGAD  L+PSR+EPCGL Q+ +MRYGT+P+V  TGGL DTV+E    +   S           D A +   V +AL  Y  +      +M N M  DLSW   AK++
Sbjct:  351 YPDKVSANIKFDVELAQKIYAGADIFLMPSRYEPCGLGQMFSMRYGTIPVVRYTGGLADTVKE----YDPQSMEGTGFGFKKYDSAHLLKAVSKALHFYYREKDHWRRIMTNAMNTDLSWDRSAKEY 473          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_MANSM (Glycogen synthase OS=Mannheimia succiniciproducens (strain MBEL55E) GN=glgA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.135e-16
Identity = 45/115 (39.13%), Postives = 69/115 (60.00%), Query Frame = 2
Query:  134 PLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKWEE 475
            PL+H+++AG D IL+PSRFEPCGL QL+ ++YGT+P+V  TGGL DTV +  T   +          +  +  A+S  + RA + +  Q     ++   M QD SW+  A+++EE
Sbjct:  359 PLSHLMVAGGDVILVPSRFEPCGLTQLYGLKYGTLPLVRQTGGLADTVVDS-TAENIKERRATGFVFNEANSQALSHAISRAFSLWKKQRTWFTVRTVAMEQDFSWQISARRYEE 472          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_LACLA (Glycogen synthase OS=Lactococcus lactis subsp. lactis GN=glgA PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.135e-16
Identity = 58/136 (42.65%), Postives = 76/136 (55.88%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV-------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYG--TQALAEMMKNGMAQDLSWKGPAKKWEE 475
            YP+K       +I  A  I AG+DF L+PS FEPCGL Q+ AMRYGT+PIV   GGL DTV       +EG TGF      VD E    V+      T+ RAL  YG   + L +M+ + M++D SW   A+++ E
Sbjct:  349 YPDKLSANIAFDIQFAQEIYAGSDFFLMPSAFEPCGLSQMIAMRYGTLPIVHEIGGLKDTVIPFNPISKEG-TGFGF----VDFEGQILVE------TINRALEVYGKEPEVLNKMVLSAMSKDFSWGTKAQQYIE 473          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_FLAJ1 (Glycogen synthase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=glgA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.135e-16
Identity = 49/119 (41.18%), Postives = 71/119 (59.66%), Query Frame = 2
Query:  128 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAV--DPVDVAAVSTTVRRALATYGTQ-ALAEMMKNGMAQDLSWKGPAKKWEE 475
            N  LAH+I AG+D+IL+PSR EPCGL Q++AMRYGT+PIV  TGGL DTV +         F  D   +  D   V  +  ++ RA+  Y  + +   +++ GMA D SW+   +++ E
Sbjct:  355 NEELAHLIYAGSDYILMPSRVEPCGLNQMYAMRYGTIPIVRRTGGLRDTVID---------FGDDGNGICHDQASVGDICYSINRAVKLYDDKISFNTVLRRGMAADHSWERVCQEYIE 464          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_BACC1 (Glycogen synthase OS=Bacillus cereus (strain ATCC 10987) GN=glgA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 3.135e-16
Identity = 55/135 (40.74%), Postives = 75/135 (55.56%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNL 490
            YPEK +     N  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV+  +  TG   G    +  A D +       TVRRA+  Y  + + E ++K  M +D SW   A  +++   +L
Sbjct:  346 YPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNGFSFTNFNAHDMLH------TVRRAIEFYHDKPVWEQLVKQAMTEDYSWGKSALAYKKLYKSL 474          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_XANC5 (Glycogen synthase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=glgA PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16
Identity = 48/126 (38.10%), Postives = 68/126 (53.97%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 469
            YP +          LA  + AGADF+L+PSRFEPCGL Q++A R+G +PI  +TGGL+DTV++G TGF     SV+          A+   + RA  T+   +L   M+   M +   W    KK+
Sbjct:  376 YPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 491          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_XANAC (Glycogen synthase OS=Xanthomonas axonopodis pv. citri GN=glgA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16
Identity = 48/126 (38.10%), Postives = 68/126 (53.97%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKN-GMAQDLSWKGPAKKW 469
            YP +          LA  + AGADF+L+PSRFEPCGL Q++A R+G +PI  +TGGL+DTV++G TGF     SV+          A+   + RA  T+   +L   M+   M +   W    KK+
Sbjct:  341 YPGQVGAFIGFEEGLARRMFAGADFLLMPSRFEPCGLSQMYAQRFGCLPIAHATGGLIDTVDDGVTGFLFQHASVE----------ALRRCLERAFRTFRLPSLLSAMRRAAMLRPSGWDVAGKKY 456          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_THIDA (Glycogen synthase OS=Thiobacillus denitrificans (strain ATCC 25259) GN=glgA PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16
Identity = 49/109 (44.95%), Postives = 63/109 (57.80%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPA 460
            LAH I AGAD  L+PSRFEPCGL Q++++RYGT+PIV  TGGL DT+ +      +   S +    D  DVA     VRRALA Y   +L   + + GM     W+  A
Sbjct:  369 LAHQIEAGADMFLMPSRFEPCGLNQMYSLRYGTLPIVFKTGGLADTIVD-TNEASLADGSANGFVFDTPDVAHFVDAVRRALALYRQPSLWRRVQQTGMRLSFDWRESA 476          
The following BLAST results are available for this feature:
BLAST of EY659801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 352
Match NameE-valueIdentityDescription
GLGA_THESQ2.400e-1640.16Glycogen synthase OS=Thermotoga sp. (strain RQ2) G... [more]
GLGA_THEP12.400e-1640.16Glycogen synthase OS=Thermotoga petrophila (strain... [more]
GLGA_THEMA2.400e-1640.16Glycogen synthase OS=Thermotoga maritima GN=glgA P... [more]
GLGA_MANSM3.135e-1639.13Glycogen synthase OS=Mannheimia succiniciproducens... [more]
GLGA_LACLA3.135e-1642.65Glycogen synthase OS=Lactococcus lactis subsp. lac... [more]
GLGA_FLAJ13.135e-1641.18Glycogen synthase OS=Flavobacterium johnsoniae (st... [more]
GLGA_BACC13.135e-1640.74Glycogen synthase OS=Bacillus cereus (strain ATCC ... [more]
GLGA_XANC54.094e-1638.10Glycogen synthase OS=Xanthomonas campestris pv. ve... [more]
GLGA_XANAC4.094e-1638.10Glycogen synthase OS=Xanthomonas axonopodis pv. ci... [more]
GLGA_THIDA4.094e-1644.95Glycogen synthase OS=Thiobacillus denitrificans (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659801 ID=EY659801; Name=EY659801; organism=Citrus sinensis; type=EST; length=847bp
CACTGGTACCCTGCTATACCGGTCCGGAATTCCTTTCAAAACACGCGCGT
CCGCAAAAACCTTTGCCCAAAAAGGGGAACAGNTGGAGATACTGTACCCT
GAGAAAGCCAGAGGAGTATCGCAACTCAATATTCCTCTGGCGCATATGAT
AATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGTG
GTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGCT
TCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCCA
GATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTGG
CTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCAA
GCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCATGGAA
AGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTTGCTG
GTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAAGGAA
AATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTATTTTG
GACCGCAAACATGGTCCTGTAATTGCTCACAACCCAAGATATTACTTAGG
AAATACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTCACTAATGGT
TTGGNAGTGAGACATTAGTGTTACCTTGGATAATGAAATATTAAGCTCTG
TTTACAGTTTTGTAAAAGGGCTCTGAAGGCTGTCGCACTCTCCTGAGATG
AAAAAGTTCACTGGACCAGTTATAAAAAAAAAAAAAAAAAAAAAAAA
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