EY659801

Overview
NameEY659801
Unique NameEY659801
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8139 contig Csv1_Contig8139:750..1598. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_NITMU (Glycogen synthase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=glgA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16
Identity = 52/131 (39.69%), Postives = 70/131 (53.44%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVS------------TTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNL 490
            LAH+I AGAD  L+PSRFEPCGL Q+++  YGT P+V  TGGL+DTV             VDC A    D  A                + RA+A Y  + + + +M+NGM QD SW+  A  + +  L+L
Sbjct:  374 LAHLIEAGADCFLMPSRFEPCGLNQMYSQCYGTPPLVHGTGGLLDTV-------------VDCTAESLADGTATGFVFHELTPEAFLGALERAVAAYRDKPVWDRLMRNGMVQDFSWRASATDYRKIYLSL 491          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_KOSOT (Glycogen synthase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=glgA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16
Identity = 51/139 (36.69%), Postives = 75/139 (53.96%), Query Frame = 2
Query:   56 KTFAQKGEQXEILYPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 469
            + F   GE+    +PEK       N+ LA  I AG+D  L+PSR+EPCGL Q+ AMRYGT+P+V  TGGL DTV+E    F   +   +    +  +   +   V +A+  Y  + L  ++M N M  D SW   A+++
Sbjct:  328 RLFKSLGER----FPEKVSANITFNVDLAQKIYAGSDMFLMPSRYEPCGLGQMFAMRYGTIPVVRFTGGLRDTVKE----FNPETLEGNGFGFEEYNPDKLLEAVEKAIKIYENKTLWNQLMLNAMNTDCSWDKSAREY 458          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_FRATN (Glycogen synthase OS=Francisella tularensis subsp. novicida (strain U112) GN=glgA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16
Identity = 49/127 (38.58%), Postives = 69/127 (54.33%), Query Frame = 2
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKKWEETLLNL 490
            AH IIAG+D I++PSRFEPCGL QL+ + YGT+P+V   GGL DTV +           TGF    FSV+          +++  +RRA A Y  +    ++ K  M Q ++W   A+K  +   NL
Sbjct:  368 AHRIIAGSDVIMVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVTDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKTDWKKVRKTAMQQQVTWDSSAEKIYQIYKNL 484          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_FRAP2 (Glycogen synthase OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=glgA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16
Identity = 49/119 (41.18%), Postives = 65/119 (54.62%), Query Frame = 2
Query:  140 AHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEG---------FTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQA-LAEMMKNGMAQDLSWKGPAKK 466
            AH IIAG+D IL+PSRFEPCGL QL+ + YGT+P+V   GGL DTV +           TGF    FSV+          +++  +RRA A Y  +A   ++ K  M Q + W   A K
Sbjct:  368 AHRIIAGSDVILVPSRFEPCGLTQLYGLTYGTLPLVHKVGGLADTVTDSSLENLADGTATGFVFDEFSVE----------SLTLAIRRAFALYNRKADWKKVRKTAMQQKVDWNAAADK 476          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_BACCR (Glycogen synthase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=glgA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16
Identity = 54/135 (40.00%), Postives = 74/135 (54.81%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNL 490
            YPEK +     N  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV   +  TG   G    +  A D +       T+ RA+  Y  + + E ++K  M +D SW+  A  ++E   +L
Sbjct:  346 YPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVHSYDEETGEGNGFSFTNFNAHDMLH------TIHRAIEFYHDKPVWEQLVKQAMTEDYSWEQSALAYKELYKSL 474          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_BACC4 (Glycogen synthase OS=Bacillus cereus (strain B4264) GN=glgA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16
Identity = 54/135 (40.00%), Postives = 74/135 (54.81%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNL 490
            YPEK +     N  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV   +  TG   G    +  A D +       T+ RA+  Y  + + E ++K  M +D SW+  A  ++E   +L
Sbjct:  346 YPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVHSYDEETGEGNGFSFTNFNAHDMLH------TIHRAIEFYHDKPVWEQLVKQAMTEDYSWEQSALAYKELYKSL 474          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_AGRRK (Glycogen synthase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=glgA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.094e-16
Identity = 45/115 (39.13%), Postives = 67/115 (58.26%), Query Frame = 2
Query:  128 NIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQAL-AEMMKNGMAQDLSWKGPAKKW 469
            N  ++H++ AG D I+IPSRFEPCGL QL+ +RYG VPIVA TGGL DT+ +          +   +   PV    +   +RRA+  +  + +  +M K GM  D+SW   A+++
Sbjct:  355 NEAMSHLMQAGCDAIIIPSRFEPCGLTQLYGLRYGCVPIVARTGGLNDTIIDANHAALQAKVATGIQ-FSPVTAEGLLQAIRRAIYLFQDRKVWTQMQKQGMKSDVSWGKSAERY 468          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_GLOVI (Glycogen synthase OS=Gloeobacter violaceus GN=glgA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.347e-16
Identity = 49/138 (35.51%), Postives = 70/138 (50.72%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNL 490
            YP++ + V   N+P+A  I  GAD  L+PSRFEPCG+ Q+ A+RYG VP+V  TGGL DTV      +E   GF    +       DP ++ A+      A           +   GM  DLSW+  A ++ +   +L
Sbjct:  325 YPDRIKAVLSYNVPIAQRIYGGADLFLMPSRFEPCGIGQMIALRYGAVPLVRKTGGLADTVFFHNPLDEKGNGFLFDRY-------DPANLLAMLYRAEEAFRY--KDYWRRLQLRGMEADLSWRASAHQYADLYKSL 453          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_BACAN (Glycogen synthase OS=Bacillus anthracis GN=glgA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.347e-16
Identity = 54/135 (40.00%), Postives = 76/135 (56.30%), Query Frame = 2
Query:   95 YPEKARGVSQLNIPLAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVE--EGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAE-MMKNGMAQDLSWKGPAKKWEETLLNL 490
            YPEK +     N  LAH + AG+D  L+PS FEPCGL QL A+ YGT+PIV  TGGL DTV+  +  TG   G    +  A D +       TV RA+  Y  +++ E ++K  M +D SW+  A  +++   +L
Sbjct:  346 YPEKVKVYIGFNEELAHQVYAGSDLFLMPSLFEPCGLGQLIALAYGTIPIVRETGGLNDTVQSYDEETGEGNGFSFTNFNAHDMLH------TVLRAIEFYHDKSVWEQLVKQAMTEDYSWEKSALAYKKLYKSL 474          
BLAST of EY659801 vs. ExPASy Swiss-Prot
Match: GLGA_SYNPW (Glycogen synthase OS=Synechococcus sp. (strain WH7803) GN=glgA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.983e-16
Identity = 56/150 (37.33%), Postives = 79/150 (52.67%), Query Frame = 2
Query:  137 LAHMIIAGADFILIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTV------EEGFTGFQMGSFSVDCEAVDPVDVAAVSTTVRRALATYGTQALAEMMKNGMAQDLSWKGPAKKWEETLLNLEVAG-SEPGIDGEEIAPLAKENVATP 565
            L+ +I AG+D  L+PSRFEPCG+ QL+AMRYG VP+V   GGLVDTV      ++  TGF    F       +PVD    +  VR   A    ++  E+ + GM QD SW   A +++   +  +V G  EP  D   +   ++   A P
Sbjct:  340 LSRLIYAGSDAFLMPSRFEPCGISQLYAMRYGCVPVVRKVGGLVDTVPPHDPRQKSGTGFCFDRF-------EPVDF--YTALVRAWEAFRHPESWKELQRRGMEQDYSWARSALEYDR--MYRDVCGLKEPSPDAAAVEQFSQGQEADP 478          
The following BLAST results are available for this feature:
BLAST of EY659801 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 352
Match NameE-valueIdentityDescription
GLGA_NITMU4.094e-1639.69Glycogen synthase OS=Nitrosospira multiformis (str... [more]
GLGA_KOSOT4.094e-1636.69Glycogen synthase OS=Kosmotoga olearia (strain TBF... [more]
GLGA_FRATN4.094e-1638.58Glycogen synthase OS=Francisella tularensis subsp.... [more]
GLGA_FRAP24.094e-1641.18Glycogen synthase OS=Francisella philomiragia subs... [more]
GLGA_BACCR4.094e-1640.00Glycogen synthase OS=Bacillus cereus (strain ATCC ... [more]
GLGA_BACC44.094e-1640.00Glycogen synthase OS=Bacillus cereus (strain B4264... [more]
GLGA_AGRRK4.094e-1639.13Glycogen synthase OS=Agrobacterium radiobacter (st... [more]
GLGA_GLOVI5.347e-1635.51Glycogen synthase OS=Gloeobacter violaceus GN=glgA... [more]
GLGA_BACAN5.347e-1640.00Glycogen synthase OS=Bacillus anthracis GN=glgA PE... [more]
GLGA_SYNPW6.983e-1637.33Glycogen synthase OS=Synechococcus sp. (strain WH7... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-C03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659801 ID=EY659801; Name=EY659801; organism=Citrus sinensis; type=EST; length=847bp
CACTGGTACCCTGCTATACCGGTCCGGAATTCCTTTCAAAACACGCGCGT
CCGCAAAAACCTTTGCCCAAAAAGGGGAACAGNTGGAGATACTGTACCCT
GAGAAAGCCAGAGGAGTATCGCAACTCAATATTCCTCTGGCGCATATGAT
AATAGCAGGAGCTGATTTTATTTTGATTCCAAGCAGATTTGAACCTTGTG
GTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTATCGTGGCT
TCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCCA
GATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTGG
CTGCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCAA
GCTTTGGCTGAAATGATGAAAAATGGCATGGCTCAAGATCTTTCATGGAA
AGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAACCTGGAAGTTGCTG
GTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAAGGAA
AATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTATTTTG
GACCGCAAACATGGTCCTGTAATTGCTCACAACCCAAGATATTACTTAGG
AAATACATAGGTTGGCAGTATATGCAGCATGCGCTATTTTCACTAATGGT
TTGGNAGTGAGACATTAGTGTTACCTTGGATAATGAAATATTAAGCTCTG
TTTACAGTTTTGTAAAAGGGCTCTGAAGGCTGTCGCACTCTCCTGAGATG
AAAAAGTTCACTGGACCAGTTATAAAAAAAAAAAAAAAAAAAAAAAA
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