EY659795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A3_HUMAN (Histone H2A type 3 OS=Homo sapiens GN=HIST3H2A PE=1 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 8.461e-31 Identity = 67/108 (62.04%), Postives = 77/108 (71.30%), Query Frame = 2 Query: 152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 475 +K+ SRS +AGLQFPVGR+ R L+ G Y+ERVGAGAP GNAARDNK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK Sbjct: 13 AKAKSRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A1E_RAT (Histone H2A type 1-E OS=Rattus norvegicus PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 8.461e-31 Identity = 67/108 (62.04%), Postives = 77/108 (71.30%), Query Frame = 2 Query: 152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 475 +K+ +RS +AGLQFPVGR+ R L+ G YAERVGAGAP GNAARDNK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK Sbjct: 13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_SEPOF (Histone H2A OS=Sepia officinalis PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.105e-30 Identity = 68/110 (61.82%), Postives = 77/110 (70.00%), Query Frame = 2 Query: 155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 484 KS +RS +AGLQFPVGRI R L+ G YA+RVGAGAP GNAARDNK +RI+PRH+QLA+RNDEEL+KLL VTIA GGVLPNI LLPKK K Sbjct: 13 KSKTRSSRAGLQFPVGRIHRLLRKGNYAQRVGAGAPVYLAAVMEYLAAEVLELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTQK 122
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_CRYNE (Histone H2A OS=Cryptococcus neoformans GN=HTA1 PE=3 SV=3) HSP 1 Score: 132.88 bits (333), Expect = 1.105e-30 Identity = 75/122 (61.48%), Postives = 84/122 (68.85%), Query Frame = 2 Query: 152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 517 +KS SRS KAGLQFPVGRI R LK G YA+R+G+GAP GNAARDNK +RIVPRH+QLAVRNDEEL+KLLGSV I+ GGVLP+I LLP K KGK ASQE Sbjct: 13 TKSSSRSSKAGLQFPVGRIHRLLKKGNYAQRIGSGAPVYLAAVLEYLAAEILELAGNAARDNKKSRIVPRHLQLAVRNDEELNKLLGSVVISQGGVLPHIMAELLPVKT-KGK---AKASQE 130
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_CAEEL (Histone H2A OS=Caenorhabditis elegans GN=his-3 PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.105e-30 Identity = 69/112 (61.61%), Postives = 76/112 (67.86%), Query Frame = 2 Query: 155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 490 K+ SRS +AGLQFPVGR+ R L+ G YA+RVGAGAP GNAARDNK RI PRH+QLAVRNDEEL+KLL VTIA GGVLPNI LLPKK G K Sbjct: 15 KAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAVLLPKKTGGDK 126
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A1_TETTH (Histone H2A.1 OS=Tetrahymena thermophila GN=HTA2 PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.105e-30 Identity = 67/112 (59.82%), Postives = 80/112 (71.43%), Query Frame = 2 Query: 149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 484 +SK VSRS +AGLQFPVGRI+RFLK G+Y+ER+G GAP GNAA+DNK RIVPRHI LA+RNDEEL+KL+ + TIA+GGVLPNI+ LLP K K Sbjct: 16 SSKQVSRSARAGLQFPVGRISRFLKNGRYSERIGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHILLAIRNDEELNKLMANTTIADGGVLPNINPMLLPSKTKK 127
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A1_TETPY (Histone H2A.1 OS=Tetrahymena pyriformis GN=HTA2 PE=1 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.105e-30 Identity = 67/112 (59.82%), Postives = 80/112 (71.43%), Query Frame = 2 Query: 149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 484 +SK VSRS +AGLQFPVGRI+RFLK G+Y+ER+G GAP GNAA+DNK RIVPRHI LA+RNDEEL+KL+ + TIA+GGVLPNI+ LLP K K Sbjct: 16 SSKQVSRSARAGLQFPVGRISRFLKNGRYSERIGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHILLAIRNDEELNKLMANTTIADGGVLPNINPMLLPSKTKK 127
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AO_CHITH (Histone H2A, orphon OS=Chironomus thummi thummi PE=3 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.443e-30 Identity = 68/113 (60.18%), Postives = 77/113 (68.14%), Query Frame = 2 Query: 152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 490 +K+ SRS +AGLQFPVGRI R L+ G YAER+GAGAP GNAARDNK RI+PRH+QLA+RNDEEL+KLL VTIA GGVLPNI LLPKK K Sbjct: 12 AKAKSRSSRAGLQFPVGRIHRLLRKGHYAERIGAGAPVYLAAVMEYLGAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAVLLPKKTESKK 124
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A4_RAT (Histone H2A type 4 OS=Rattus norvegicus PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.443e-30 Identity = 66/108 (61.11%), Postives = 76/108 (70.37%), Query Frame = 2 Query: 152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 475 +K+ SRS +AGLQFPVGR+ R L+ G YAER+GAG P GNAARDNK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK Sbjct: 13 AKAKSRSFRAGLQFPVGRVHRLLRQGNYAERIGAGTPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK 120
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A1D_HUMAN (Histone H2A type 1-D OS=Homo sapiens GN=HIST1H2AD PE=1 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.443e-30 Identity = 66/108 (61.11%), Postives = 77/108 (71.30%), Query Frame = 2 Query: 152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 475 +K+ +RS +AGLQFPVGR+ R L+ G Y+ERVGAGAP GNAARDNK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLPKK Sbjct: 13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAVLLPKK 120 The following BLAST results are available for this feature:
BLAST of EY659795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659795 ID=EY659795; Name=EY659795; organism=Citrus sinensis; type=EST; length=572bpback to top |