EY659795

Overview
NameEY659795
Unique NameEY659795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A3_VOLCA (Histone H2A-III OS=Volvox carteri PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.592e-37
Identity = 80/114 (70.18%), Postives = 86/114 (75.44%), Query Frame = 2
Query:  155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGD 496
            K+VSRS KAGLQFPVGRIAR+LK GKYAER+GAGAP                  GNAARDNK NRIVPRHIQLA+RNDEEL KLLG VTIA+GGVLPNIH  LLPKK   GKG+
Sbjct:   13 KAVSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGDVTIASGGVLPNIHAVLLPKKSKGGKGE 126          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A2_ARATH (Probable histone H2A.2 OS=Arabidopsis thaliana GN=At3g20670 PE=1 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.592e-37
Identity = 82/114 (71.93%), Postives = 83/114 (72.81%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 490
            A KS SRS KAGLQFPVGRIARFLK GKYA RVGAGAP                  GNAARDNK  RIVPRHIQLAVRNDEELSKLLG VTIANGGV+PNIH  LLPKK G  K
Sbjct:   13 AKKSTSRSSKAGLQFPVGRIARFLKNGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHSLLLPKKAGASK 126          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A2_ORYSJ (Probable histone H2A.2 OS=Oryza sativa subsp. japonica GN=Os07g0545400 PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.079e-37
Identity = 80/111 (72.07%), Postives = 86/111 (77.48%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVG 481
            A K++SRS KAGLQFPVGRIARFLKAGKYAERVGAGAP                  GNAARDNK  RIVPRHIQLAVRNDEELS+LLG+VTIA+GGV+PNIH  LLPKK G
Sbjct:   13 AKKAMSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKAG 123          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A2_ORYSI (Probable histone H2A.2 OS=Oryza sativa subsp. indica GN=OsI_025469 PE=3 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 2.079e-37
Identity = 80/111 (72.07%), Postives = 86/111 (77.48%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVG 481
            A K++SRS KAGLQFPVGRIARFLKAGKYAERVGAGAP                  GNAARDNK  RIVPRHIQLAVRNDEELS+LLG+VTIA+GGV+PNIH  LLPKK G
Sbjct:   13 AKKAMSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSRLLGTVTIASGGVMPNIHNLLLPKKAG 123          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A8_ORYSI (Probable histone H2A.8 OS=Oryza sativa subsp. indica GN=OsI_036919 PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 2.715e-37
Identity = 80/114 (70.18%), Postives = 84/114 (73.68%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 490
            A K+ SRS K GLQFPVGRIARFLKAGKYAERVGAGAP                  GNAARDNK  RIVPRHIQLAVRNDEEL+KLLG  TIA+GGV+PNIHQ LLPKK G  K
Sbjct:   13 AKKATSRSSKGGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKAGSSK 126          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A4_WHEAT (Histone H2A.4 OS=Triticum aestivum GN=TH254 PE=2 SV=3)

HSP 1 Score: 154.066 bits (388), Expect = 4.632e-37
Identity = 80/114 (70.18%), Postives = 84/114 (73.68%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGK 490
            A K+ SRS KAGLQFPVGRIARFLKAGKYAERVGAGAP                  GNAARDNK  RIVPRHIQLAVRNDEEL+KLLG  TIA+GGV+PNIHQ LLPKK    K
Sbjct:   13 AKKATSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNIHQHLLPKKASSSK 126          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A2_PICGU (Histone H2A.2 OS=Pichia guilliermondii GN=HTA2 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 8.176e-34
Identity = 76/120 (63.33%), Postives = 84/120 (70.00%), Query Frame = 2
Query:  158 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 517
            S SRS KAGL FPVGRI R L+ G YA+RVG+GAP                  GNAARDNK +RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GKG      ASQE
Sbjct:   14 STSRSAKAGLTFPVGRIHRLLRKGNYAQRVGSGAPVYLTSVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQNLLPKKSGKG----DKASQE 129          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_PLAFA (Histone H2A OS=Plasmodium falciparum PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.395e-33
Identity = 76/125 (60.80%), Postives = 86/125 (68.80%), Query Frame = 2
Query:  146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQEF 520
            KASK  S S KAGLQFPVGRI R+LK GKYA+RVGAGAP                  GNAARDNK +RI PRHIQLAVRNDEEL+K L  VT A+GGVLPNIH  LLPK   K +   G+A+Q++
Sbjct:   11 KASKGTSNSAKAGLQFPVGRIGRYLKKGKYAKRVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRITPRHIQLAVRNDEELNKFLAGVTFASGGVLPNIHNVLLPK---KSQLKAGTANQDY 132          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_MAGGR (Histone H2A OS=Magnaporthe grisea GN=HTA1 PE=2 SV=3)

HSP 1 Score: 142.51 bits (358), Expect = 1.395e-33
Identity = 75/118 (63.56%), Postives = 83/118 (70.34%), Query Frame = 2
Query:  164 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 517
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNK  RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK GK  G   +ASQE
Sbjct:   19 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTGKTAGG-KNASQE 135          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A1_DEBHA (Histone H2A.1 OS=Debaryomyces hansenii GN=HTA1 PE=3 SV=3)

HSP 1 Score: 142.124 bits (357), Expect = 1.821e-33
Identity = 75/120 (62.50%), Postives = 84/120 (70.00%), Query Frame = 2
Query:  158 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 517
            S SRS KAGL FPVGR+ R L+ G YA+RVG+GAP                  GNAARDNK +RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK  KGK     ASQE
Sbjct:   15 STSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKSAKGK-----ASQE 129          
The following BLAST results are available for this feature:
BLAST of EY659795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
H2A3_VOLCA1.592e-3770.18Histone H2A-III OS=Volvox carteri PE=3 SV=1[more]
H2A2_ARATH1.592e-3771.93Probable histone H2A.2 OS=Arabidopsis thaliana GN=... [more]
H2A2_ORYSJ2.079e-3772.07Probable histone H2A.2 OS=Oryza sativa subsp. japo... [more]
H2A2_ORYSI2.079e-3772.07Probable histone H2A.2 OS=Oryza sativa subsp. indi... [more]
H2A8_ORYSI2.715e-3770.18Probable histone H2A.8 OS=Oryza sativa subsp. indi... [more]
H2A4_WHEAT4.632e-3770.18Histone H2A.4 OS=Triticum aestivum GN=TH254 PE=2 S... [more]
H2A2_PICGU8.176e-3463.33Histone H2A.2 OS=Pichia guilliermondii GN=HTA2 PE=... [more]
H2A_PLAFA1.395e-3360.80Histone H2A OS=Plasmodium falciparum PE=2 SV=1[more]
H2A_MAGGR1.395e-3363.56Histone H2A OS=Magnaporthe grisea GN=HTA1 PE=2 SV=... [more]
H2A1_DEBHA1.821e-3362.50Histone H2A.1 OS=Debaryomyces hansenii GN=HTA1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-B08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659795 ID=EY659795; Name=EY659795; organism=Citrus sinensis; type=EST; length=572bp
TTCAGTAGCGGACGCGTCCGCACCGATCTTCCTAAAAAAGGGACTTTCAA
TCGCTTCAAACCAAACCGAAATCTAAGGTTAGGTTTTCTCTGTAATAAGA
ATGAGTTCAACTGGAGGGTCAACGAAGGGCGGCAGGGGTAAGCCGAAGGC
TTCGAAATCGGTCTCGCGGTCGCATAAGGCGGGCCTTCAGTTCCCGGTGG
GCAGGATCGCTAGGTTTTTGAAGGCCGGAAAGTACGCTGAGCGAGTCGGC
GCCGGAGCTCCTGTTTACCTCTCTGCCGTGCTTGAGTACCTCGCTGCTGA
GGTTCTGGAGCTTGCTGGCAATGCAGCAAGGGACAACAAGAACAACCGTA
TAGTGCCAAGGCATATTCAGCTTGCAGTTCGAAATGATGAGGAATTGAGC
AAGCTGCTGGGCTCGGTTACCATTGCCAATGGAGGTGTTTTACCCAACAT
TCACCAGACGCTGCTTCCCAAGAAGGTGGGGAAAGGAAAGGGTGACATTG
GTTCTGCTTCTCAAGAGTTCTAGACTCTGCTCTGTCAGAATTTTACTAGT
ATCTGTAAAAAAAAAAAAAAAA
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