EY659795

Overview
NameEY659795
Unique NameEY659795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AZ_PHANO (Histone H2A.Z OS=Phaeosphaeria nodorum GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.688e-16
Identity = 53/111 (47.75%), Postives = 63/111 (56.76%), Query Frame = 2
Query:  164 SRSHKAGLQFPVGRIARFLKA-GKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKG 493
            S S KAGLQFP GRI R L+   +   R+GA A                   GNAA+D K  RI PRH+QLA+R DEEL  L+   TIA GGVLP+I++ LL K   K KG
Sbjct:   25 SHSAKAGLQFPCGRIKRHLRTITRQKTRIGAKASIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLI-RATIAFGGVLPHINRALLLKVEQKKKG 134          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AZ_ASPTN (Histone H2A.Z OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=HTZ1 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.004e-15
Identity = 54/111 (48.65%), Postives = 62/111 (55.86%), Query Frame = 2
Query:  164 SRSHKAGLQFPVGRIARFLKAGKYAE-RVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKG 493
            S S KAGLQFP G + RFLK     + RVGA A                   GNAA+D K  RI PRH+QLA+R DEEL  L+   TIA GGVLP I++ LL K   K KG
Sbjct:   25 SHSAKAGLQFPRGSVKRFLKNNTQNKMRVGAKAAVYVTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQLAIRGDEELDTLI-RATIAFGGVLPRINRALLLKVEQKKKG 134          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AX_DICDI (Histone H2A.x OS=Dictyostelium discoideum GN=H2AX PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.398e-14
Identity = 48/121 (39.67%), Postives = 60/121 (49.59%), Query Frame = 2
Query:  152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQ 514
            SK  SRS +AG+ FPV R+ R L+ G++A RV + AP                   N    +K  RI P+HI  AV ND EL+ L   VTIA GGVLP   Q+   KK    K     +SQ
Sbjct:   32 SKPESRSARAGITFPVSRVDRLLREGRFAPRVESTAPVYLAAVLEYLVFEILELAHNTCSISKKTRITPQHINWAVGNDLELNSLFQHVTIAYGGVLPTPQQSTGEKKKKPSKKAAEGSSQ 152          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_TRYCR (Histone H2A OS=Trypanosoma cruzi PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 6.092e-13
Identity = 45/113 (39.82%), Postives = 61/113 (53.98%), Query Frame = 2
Query:  146 KASKSVS--RSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDN--KNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPK 472
            KASK  S  RS KAGL FPVGR+   L+ G+YA R+GA                       AA     K  R+ PR + LAVR+D++L  LL  VT++ GGV+P++++ L  K
Sbjct:   10 KASKKRSGGRSAKAGLIFPVGRVGSLLRRGQYARRIGASGAVYMAAVLEYLTAELLELSVKAASQQAKKPKRLTPRTVTLAVRHDDDLGMLLKDVTLSRGGVMPSLNKALAKK 122          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A1_LEIIN (Histone H2A.1 OS=Leishmania infantum PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.039e-12
Identity = 43/112 (38.39%), Postives = 63/112 (56.25%), Query Frame = 2
Query:  155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGA-GAPXXXXXXXXXXXXXXXXXXGNAARDNKNN-RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 484
            KS S+S K GL FPVGR+   ++ G+YA R+GA GA                     AA+  K   R+ PR + LA R+D+++  LL +VT+++ GV+PNI + +  KK GK
Sbjct:   13 KSGSKSAKCGLIFPVGRVGGMMRRGQYARRIGASGAVYLAAVLEYLTAELLELSVKAAAQSGKKRCRLNPRTVMLAARHDDDIGTLLKNVTLSHSGVVPNISKAMAKKKGGK 124          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A2_LILLO (Histone H2A.2 OS=Lilium longiflorum GN=gH2A PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.772e-12
Identity = 43/108 (39.81%), Postives = 54/108 (50.00%), Query Frame = 2
Query:  152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKK 475
            S+   RS KA LQF V R+   LK G+Y  R+GA AP                   N    +K   I PRHI LAVRND E++KL   VTI+  GV+P   + L  +K
Sbjct:   13 SRRKLRSEKAALQFSVSRVEYSLKKGRYCRRLGATAPVYLAAVLENLVAEVLEMAANVTEKHKRIVIKPRHIMLAVRNDVEVNKLFHGVTISASGVVPKTRKELDRRK 120          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A2_LEIIN (Histone H2A.2 OS=Leishmania infantum PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.023e-12
Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGA-GAPXXXXXXXXXXXXXXXXXXGNAARDNKNN-RIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 484
            A KS S+S K GL FPVGR+   ++ G+YA R+GA GA                     AA+  K   R+ PR + LA R+D+++  LL +VT+++ GV+P++ + +  KK GK
Sbjct:   11 ARKSGSKSAKCGLIFPVGRVGGMMRRGQYARRIGASGAVYLAAVLEYLTAELLELSVKAAAQSGKKRCRLNPRTVMLAARHDDDIGTLLKNVTLSHSGVVPSVSKAVAKKKGGK 124          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_OLILU (Histone H2A (Fragment) OS=Olisthodiscus luteus PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.157e-12
Identity = 41/67 (61.19%), Postives = 46/67 (68.66%), Query Frame = 2
Query:  251 AGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNI 451
            AGAP     XXX       X  GNAARDNK +RI+PRH+QLAV     L+KLLG+VTIA GGVLPNI
Sbjct:    1 AGAPVYLAAXXXYLTAEILXLAGNAARDNKKSRIIPRHVQLAVXXXXXLNKLLGNVTIAQGGVLPNI 67          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AV1_DICDI (Histone H2A.v1 OS=Dictyostelium discoideum GN=H2Av1 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.559e-11
Identity = 42/108 (38.89%), Postives = 55/108 (50.93%), Query Frame = 2
Query:  164 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLL--PKKVG 481
            SRS +A L FPV RI + ++ G++ +R  + AP                     A      RI P+HI L++  D EL+ LL +VTIANGGV   IH  LL  PKK G
Sbjct:  132 SRSARADLTFPVSRIEKMIREGRFTKRCSSDAPVFLAAVLEYLTLEILELSITYANQKNKTRITPQHIHLSICCDAELNDLLKNVTIANGGVPKFIHPILLDTPKKKG 239          
The following BLAST results are available for this feature:
BLAST of EY659795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
H2AZ_PHANO7.688e-1647.75Histone H2A.Z OS=Phaeosphaeria nodorum GN=HTZ1 PE=... [more]
H2AZ_ASPTN1.004e-1548.65Histone H2A.Z OS=Aspergillus terreus (strain NIH 2... [more]
H2AX_DICDI9.398e-1439.67Histone H2A.x OS=Dictyostelium discoideum GN=H2AX ... [more]
H2A_TRYCR6.092e-1339.82Histone H2A OS=Trypanosoma cruzi PE=3 SV=2[more]
H2A1_LEIIN1.039e-1238.39Histone H2A.1 OS=Leishmania infantum PE=2 SV=1[more]
H2A2_LILLO1.772e-1239.81Histone H2A.2 OS=Lilium longiflorum GN=gH2A PE=1 S... [more]
H2A2_LEIIN3.023e-1236.84Histone H2A.2 OS=Leishmania infantum PE=2 SV=1[more]
H2A_OLILU5.157e-1261.19Histone H2A (Fragment) OS=Olisthodiscus luteus PE=... [more]
H2AV1_DICDI2.559e-1138.89Histone H2A.v1 OS=Dictyostelium discoideum GN=H2Av... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-B08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659795 ID=EY659795; Name=EY659795; organism=Citrus sinensis; type=EST; length=572bp
TTCAGTAGCGGACGCGTCCGCACCGATCTTCCTAAAAAAGGGACTTTCAA
TCGCTTCAAACCAAACCGAAATCTAAGGTTAGGTTTTCTCTGTAATAAGA
ATGAGTTCAACTGGAGGGTCAACGAAGGGCGGCAGGGGTAAGCCGAAGGC
TTCGAAATCGGTCTCGCGGTCGCATAAGGCGGGCCTTCAGTTCCCGGTGG
GCAGGATCGCTAGGTTTTTGAAGGCCGGAAAGTACGCTGAGCGAGTCGGC
GCCGGAGCTCCTGTTTACCTCTCTGCCGTGCTTGAGTACCTCGCTGCTGA
GGTTCTGGAGCTTGCTGGCAATGCAGCAAGGGACAACAAGAACAACCGTA
TAGTGCCAAGGCATATTCAGCTTGCAGTTCGAAATGATGAGGAATTGAGC
AAGCTGCTGGGCTCGGTTACCATTGCCAATGGAGGTGTTTTACCCAACAT
TCACCAGACGCTGCTTCCCAAGAAGGTGGGGAAAGGAAAGGGTGACATTG
GTTCTGCTTCTCAAGAGTTCTAGACTCTGCTCTGTCAGAATTTTACTAGT
ATCTGTAAAAAAAAAAAAAAAA
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