EY659795

Overview
NameEY659795
Unique NameEY659795
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length572
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A1_PSAMI (Late histone H2A.1 OS=Psammechinus miliaris PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.181e-32
Identity = 71/113 (62.83%), Postives = 79/113 (69.91%), Query Frame = 2
Query:  146 KASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 484
            K +KS +RS +AGLQFPVGR+ RFLK G Y  RVGAGAP                  GNAARDNK +RI+PRH+QLAVRNDEEL+KLLG VTIA GGVLPNI   LLPKK  K
Sbjct:   10 KGTKSKTRSSRAGLQFPVGRVHRFLKKGNYGSRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTAK 122          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_PARLI (Histone H2A OS=Paracentrotus lividus PE=3 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.542e-32
Identity = 70/111 (63.06%), Postives = 80/111 (72.07%), Query Frame = 2
Query:  152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 484
            +K+ SRS +AGLQFPVGR+ RFL+ G YA+RVG GAP                  GNAARDNK +RI+PRH+QLAVRNDEEL+KLLG VTIA GGVLPNI   LLPKK GK
Sbjct:   12 TKAKSRSSRAGLQFPVGRVHRFLRKGNYAKRVGGGAPVYMAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGK 122          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_KLULA (Histone H2A OS=Kluyveromyces lactis GN=HTA1 PE=3 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 1.542e-32
Identity = 73/123 (59.35%), Postives = 84/123 (68.29%), Query Frame = 2
Query:  149 ASKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 517
            A  S SRS KAGL FPVGR+ R L+ G YA+R+G+GAP                  GNAARDNK  RI+PRH+QLA+RND+EL+KLLG+VTIA GGVLPNIHQ LLPKK  K K     ASQE
Sbjct:   12 AKASQSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSSKAK-----ASQE 129          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_EUPES (Histone H2A OS=Euphorbia esula PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 1.542e-32
Identity = 72/110 (65.45%), Postives = 79/110 (71.82%), Query Frame = 2
Query:  155 KSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK 484
            K VSRS KAGLQFPVGRI RFLK G+YA+RVG+GAP                  GNAARDNK NRI+PRH+ LAVRNDEEL KLL  VTIA+GGVLPNI+  LLPKK  K
Sbjct:   22 KPVSRSVKAGLQFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKAEK 131          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2AX_DANRE (Histone H2A.x OS=Danio rerio GN=h2afx PE=2 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 1.542e-32
Identity = 70/122 (57.38%), Postives = 83/122 (68.03%), Query Frame = 2
Query:  152 SKSVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 517
            +K+ +RS +AGLQFPVGR+ R L+ G YAERVGAGAP                  GNAARDNK  RI+PRH+QLAVRNDEEL+KLLG VTIA GGVLPNI   LLPKK G+     G + ++
Sbjct:   13 AKAKTRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGQAAASSGKSGKK 134          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A2_DEBHA (Histone H2A.2 OS=Debaryomyces hansenii GN=HTA2 PE=3 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 1.542e-32
Identity = 73/120 (60.83%), Postives = 84/120 (70.00%), Query Frame = 2
Query:  158 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 517
            S SRS KAGL FPVGR+ R L+ G YA+RVG+GAP                  GNAARDNK +RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ+LLP K    K   G+ASQE
Sbjct:   15 STSRSAKAGLTFPVGRVHRLLRKGNYAQRVGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQSLLPAK----KAKAGNASQE 130          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A2_CANAL (Histone H2A.2 OS=Candida albicans GN=HTA2 PE=3 SV=3)

HSP 1 Score: 139.043 bits (349), Expect = 1.542e-32
Identity = 72/120 (60.00%), Postives = 84/120 (70.00%), Query Frame = 2
Query:  158 SVSRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGKGKGDIGSASQE 517
            S SRS KAGL FPVGR+ R L+ G YA+R+G+GAP                  GNAARDNK +RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ+LLP K    K   G+ASQE
Sbjct:   15 STSRSAKAGLTFPVGRVHRLLRKGNYAQRIGSGAPVYLTSVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDEELNKLLGDVTIAQGGVLPNIHQSLLPAK----KAKAGAASQE 130          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_NEOFI (Histone H2A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=hta1 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.014e-32
Identity = 72/111 (64.86%), Postives = 79/111 (71.17%), Query Frame = 2
Query:  164 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK-GKG 493
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNK  RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK  K GKG
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_EMENI (Histone H2A OS=Emericella nidulans GN=htaA PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.014e-32
Identity = 72/111 (64.86%), Postives = 79/111 (71.17%), Query Frame = 2
Query:  164 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK-GKG 493
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNK  RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK  K GKG
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKAGKG 128          
BLAST of EY659795 vs. ExPASy Swiss-Prot
Match: H2A_ASPOR (Histone H2A OS=Aspergillus oryzae GN=hta1 PE=3 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 2.014e-32
Identity = 72/111 (64.86%), Postives = 79/111 (71.17%), Query Frame = 2
Query:  164 SRSHKAGLQFPVGRIARFLKAGKYAERVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPKKVGK-GKG 493
            SRS KAGL FPVGR+ R L+ G YA+RVGAGAP                  GNAARDNK  RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQ LLPKK  K GKG
Sbjct:   18 SRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPKSGKG 128          
The following BLAST results are available for this feature:
BLAST of EY659795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
H2A1_PSAMI1.181e-3262.83Late histone H2A.1 OS=Psammechinus miliaris PE=2 S... [more]
H2A_PARLI1.542e-3263.06Histone H2A OS=Paracentrotus lividus PE=3 SV=2[more]
H2A_KLULA1.542e-3259.35Histone H2A OS=Kluyveromyces lactis GN=HTA1 PE=3 S... [more]
H2A_EUPES1.542e-3265.45Histone H2A OS=Euphorbia esula PE=2 SV=1[more]
H2AX_DANRE1.542e-3257.38Histone H2A.x OS=Danio rerio GN=h2afx PE=2 SV=3[more]
H2A2_DEBHA1.542e-3260.83Histone H2A.2 OS=Debaryomyces hansenii GN=HTA2 PE=... [more]
H2A2_CANAL1.542e-3260.00Histone H2A.2 OS=Candida albicans GN=HTA2 PE=3 SV=... [more]
H2A_NEOFI2.014e-3264.86Histone H2A OS=Neosartorya fischeri (strain ATCC 1... [more]
H2A_EMENI2.014e-3264.86Histone H2A OS=Emericella nidulans GN=htaA PE=3 SV... [more]
H2A_ASPOR2.014e-3264.86Histone H2A OS=Aspergillus oryzae GN=hta1 PE=3 SV=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-B08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659795 ID=EY659795; Name=EY659795; organism=Citrus sinensis; type=EST; length=572bp
TTCAGTAGCGGACGCGTCCGCACCGATCTTCCTAAAAAAGGGACTTTCAA
TCGCTTCAAACCAAACCGAAATCTAAGGTTAGGTTTTCTCTGTAATAAGA
ATGAGTTCAACTGGAGGGTCAACGAAGGGCGGCAGGGGTAAGCCGAAGGC
TTCGAAATCGGTCTCGCGGTCGCATAAGGCGGGCCTTCAGTTCCCGGTGG
GCAGGATCGCTAGGTTTTTGAAGGCCGGAAAGTACGCTGAGCGAGTCGGC
GCCGGAGCTCCTGTTTACCTCTCTGCCGTGCTTGAGTACCTCGCTGCTGA
GGTTCTGGAGCTTGCTGGCAATGCAGCAAGGGACAACAAGAACAACCGTA
TAGTGCCAAGGCATATTCAGCTTGCAGTTCGAAATGATGAGGAATTGAGC
AAGCTGCTGGGCTCGGTTACCATTGCCAATGGAGGTGTTTTACCCAACAT
TCACCAGACGCTGCTTCCCAAGAAGGTGGGGAAAGGAAAGGGTGACATTG
GTTCTGCTTCTCAAGAGTTCTAGACTCTGCTCTGTCAGAATTTTACTAGT
ATCTGTAAAAAAAAAAAAAAAA
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